Select to display Genome Domains Proteins
No Yes ALL 56491 56491
No Yes Homo sapiens 76_38 Human 15 8
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 3 2
No Yes Pongo abelii 76_2 Sumatran orangutan 2 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 1
No Yes Papio anubis 76 Olive baboon 2 1
No Yes Macaca mulatta 76_1 Rhesus monkey 2 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7 4
No Yes Otolemur garnettii 76_3 Small-eared galago 2 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 2 1
No Yes Mus musculus 76_38 House mouse 2 1
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 2 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 3 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 2 1
No Yes Ochotona princeps 76 American pika 2 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 2 1
No Yes Ovis aries 76_3.1 Sheep 2 1
No Yes Vicugna pacos 76_1 Alpaca 2 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 1
No Yes Canis familiaris 76_3.1 Dog 4 2
No Yes Felis catus 76_6.2 Domestic cat 2 1
No Yes Equus caballus 76_2 Horse 2 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 1
No Yes Pteropus vampyrus 76_1 Large flying fox 2 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 2 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 2
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 1
No Yes Saccoglossus kowalevskii v3.0 2 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 1
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 2 1
No Yes Anas platyrhynchos 76_1.0 Mallard 2 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 1
No Yes Anolis carolinensis 76_2.0 Green anole 2 1
No Yes Xenopus laevis African clawed frog 4 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 1
No Yes Latimeria chalumnae 76_1 Coelacanth 4 2
No Yes Lepisosteus oculatus 76 Spotted gar 4 2
No Yes Gadus morhua 76_1 Atlantic cod 2 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 1
No Yes Takifugu rubripes 76_4 Torafugu 4 2
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 2 1
No Yes Oryzias latipes 76_1 Japanese medaka 2 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 1
No Yes Poecilia formosa 76 Amazon molly 2 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 1
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 2 1
No Yes Oikopleura dioica 2 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 1
No Yes Ciona intestinalis 76 Vase tunicate 2 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2 2
No Yes Adineta vaga 4 2
No Yes Octopus bimaculoides 280 2 1
No Yes Crassostrea gigas 22 Pacific oyster 2 1
No Yes Lottia gigantea Owl limpet 2 1
No Yes Helobdella robusta 2 1
No Yes Capitella sp. I 2 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Bombyx mori Domestic silkworm 2 1
No Yes Nasonia vitripennis Jewel wasp 2 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 4 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 1
No Yes Linepithema humile v1.1 Argentine ant 2 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 1
No Yes Atta cephalotes v1.1 1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 2 1
No Yes Drosophila grimshawi 1.3 2 1
No Yes Drosophila willistoni 1.3 2 1
No Yes Drosophila pseudoobscura 2.13 2 1
No Yes Drosophila persimilis 1.3 2 1
No Yes Drosophila suzukii 2 1
No Yes Drosophila yakuba 1.3 2 1
No Yes Drosophila melanogaster 76_5 Fruit fly 2 1
No Yes Drosophila erecta 1.3 2 1
No Yes Drosophila ananassae 1.3 2 1
No Yes Drosophila virilis 1.2 2 1
No Yes Drosophila mojavensis 1.3 2 1
No Yes Megaselia scalaris 22 1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 1
No Yes Anopheles darlingi 22 American malaria mosquito 2 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 1
No Yes Tribolium castaneum 3.0 Red flour beetle 2 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 1
No Yes Acyrthosiphon pisum Pea aphid 2 1
No Yes Rhodnius prolixus 22 1 1
No Yes Daphnia pulex Common water flea 2 1
No Yes Strigamia maritima 22 2 1
No Yes Tetranychus urticae Two-spotted spider mite 2 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 1
No Yes Pristionchus pacificus 6 4
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Onchocerca volvulus 22 1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 1
No Yes Caenorhabditis japonica 2 1
No Yes Caenorhabditis brenneri 4 2
No Yes Caenorhabditis remanei 2 1
No Yes Caenorhabditis elegans 76_235 Roundworm 2 1
No Yes Caenorhabditis briggsae 2 2 1
No Yes Acropora digitifera v1.0 2 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 1
No Yes Hydra vulgaris 1 1
No Yes Amphimedon queenslandica 2 1
No Yes Trichoplax adhaerens 2 1
No Yes Proterospongia sp. ATCC 50818 2 2
No Yes Monosiga brevicollis 3 2
No Yes Sphaeroforma arctica JP610 1 1
No Yes Capsaspora owczarzaki ATCC 30864 2 1
No Yes Conidiobolus coronatus NRRL28638 v1.0 1 1
No Yes Mortierella verticillata NRRL 6337 2 2
No Yes Phycomyces blakesleeanus 3 3
No Yes Rhizopus oryzae RA 99-880 2 2
No Yes Mucor circinelloides 2 2
No Yes Rhizomucor miehei CAU432 3 3
No Yes Sporisorium reilianum 22 1 1
No Yes Ustilago maydis 1 1
No Yes Mixia osmundae IAM 14324 v1.0 1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0 1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3 5 3
No Yes Melampsora laricis-populina 2 2
No Yes Rhodotorula graminis WP1 v1.0 1 1
No Yes Sporobolomyces roseus IAM 13481 1 1
No Yes Microbotryum violaceum 22 1 1
No Yes Sphaerobolus stellatus v1.0 1 1
No Yes Piloderma croceum F 1598 v1.0 1 1
No Yes Serpula lacrymans var. lacrymans S7.9 1 1
No Yes Coniophora puteana 1 1
No Yes Hydnomerulius pinastri v2.0 1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0 1 1
No Yes Pisolithus microcarpus 441 v1.0 2 2
No Yes Pisolithus tinctorius Marx 270 v1.0 1 1
No Yes Scleroderma citrinum Foug A v1.0 1 1
No Yes Coprinopsis cinerea okayama7 130 v3 1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0 1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0 1 1
No Yes Hebeloma cylindrosporum h7 v2.0 1 1
No Yes Laccaria bicolor S238N-H82 1 1
No Yes Agaricus bisporus var. bisporus 1 1
No Yes Schizophyllum commune 1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0 1 1
No Yes Heterobasidion annosum 1 1
No Yes Gloeophyllum trabeum v1.0 2 1
No Yes Punctularia strigosozonata v1.0 1 1
No Yes Sebacina vermifera MAFF 305830 v1.0 1 1
No Yes Fomitiporia mediterranea v1.0 1 1
No Yes Tulasnella calospora AL13/4D v1.0 1 1
No Yes Postia placenta 1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0 1 1
No Yes Fomitopsis pinicola v1.0 1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0 1 1
No Yes Phanerochaete chrysosporium RP-78 2.1 1 1
No Yes Dichomitus squalens 2 1
No Yes Trametes versicolor v1.0 1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0 1 1
No Yes Apiospora montagnei NRRL 25634 v1.0 1 1
No Yes Magnaporthe poae ATCC 64411 22 2 1
No Yes Magnaporthe grisea 70-15 1 1
No Yes Podospora anserina 1 1
No Yes Sporotrichum thermophile ATCC 42464 1 1
No Yes Thielavia terrestris NRRL 8126 1 1
No Yes Chaetomium globosum CBS 148.51 1 1
No Yes Neurospora tetrasperma 1 1
No Yes Neurospora discreta FGSC 8579 1 1
No Yes Neurospora crassa OR74A 1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 2 1
No Yes Verticillium albo-atrum VaMs.102 1 1
No Yes Verticillium dahliae VdLs.17 2 2
No Yes Acremonium alcalophilum v 1.0 1 1
No Yes Glomerella graminicola 22 2 1
No Yes Fusarium graminearum 1 1
No Yes Nectria haematococca mpVI 1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286 2 2
No Yes Fusarium verticillioides 7600 1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0 1 1
No Yes Trichoderma atroviride 1 1
No Yes Trichoderma citrinoviride v1.0 1 1
No Yes Trichoderma reesei 1.2 1 1
No Yes Trichoderma virens Gv29-8 1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0 1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0 1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10 1 1
No Yes Sclerotinia sclerotiorum 2 1
No Yes Blumeria graminis 22 1 1
No Yes Didymella exigua CBS 183.55 v1.0 2 1
No Yes Leptosphaeria maculans 22 2 1
No Yes Setosphaeria turcica v1.0 1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0 2 1
No Yes Cochliobolus victoriae FI3 v1.0 2 1
No Yes Cochliobolus carbonum 26-R-13 v1.0 2 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 1
No Yes Alternaria brassicicola 1 1
No Yes Cochliobolus lunatus m118 v2.0 1 1
No Yes Pyrenophora teres f. teres 22 1 1
No Yes Pyrenophora tritici-repentis 1 1
No Yes Stagonospora nodorum 2 1
No Yes Mycosphaerella graminicola IPO323 1 1
No Yes Zasmidium cellare ATCC 36951 v1.0 2 2
No Yes Dothistroma septosporum 3 2
No Yes Septoria musiva v1.0 1 1
No Yes Mycosphaerella fijiensis CIRAD86 2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 2 1
No Yes Paracoccidioides brasiliensis Pb18 1 1
No Yes Coccidioides posadasii RMSCC 3488 1 1
No Yes Coccidioides immitis RS 1 1
No Yes Ajellomyces dermatitidis SLH14081 1 1
No Yes Histoplasma capsulatum class NAmI strain WU24 1 1
No Yes Microsporum canis CBS 113480 1 1
No Yes Trichophyton equinum CBS 127.97 1 1
No Yes Trichophyton verrucosum HKI 0517 1 1
No Yes Arthroderma benhamiae CBS 112371 1 1
No Yes Trichophyton tonsurans CBS 112818 1 1
No Yes Trichophyton rubrum CBS 118892 1 1
No Yes Uncinocarpus reesii 1704 2 1
No Yes Aspergillus zonatus v1.0 1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255 1 1
No Yes Penicillium chrysogenum v1.0 1 1
No Yes Aspergillus acidus v1.0 1 1
No Yes Aspergillus fumigatus Af293 1 1
No Yes Aspergillus brasiliensis v1.0 1 1
No Yes Aspergillus nidulans FGSC A4 2 1
No Yes Aspergillus sydowii v1.0 2 1
No Yes Aspergillus versicolor v1.0 1 1
No Yes Aspergillus glaucus 1 1
No Yes Aspergillus carbonarius ITEM 5010 1 1
No Yes Neosartorya fischeri NRRL 181 1 1
No Yes Aspergillus terreus NIH2624 1 1
No Yes Aspergillus tubingensis v1.0 1 1
No Yes Aspergillus wentii v1.0 1 1
No Yes Aspergillus oryzae RIB40 2 1
No Yes Aspergillus niger 22 1 1
No Yes Aspergillus flavus NRRL3357 2 1
No Yes Aspergillus clavatus NRRL 1 1 1
No Yes Penicillium marneffei ATCC 18224 2 1
No Yes Tuber melanosporum Mel28 22 1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0 2 1
No Yes Dekkera bruxellensis CBS 2499 v2.0 2 1
No Yes Pichia membranifaciens v1.0 2 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0 2 1
No Yes Candida dubliniensis CD36 2 1
No Yes Candida tropicalis MYA-3404 2 1
No Yes Candida parapsilosis 2 1
No Yes Candida albicans SC5314 2 1
No Yes Lodderomyces elongisporus NRRL YB-4239 2 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0 2 1
No Yes Pichia stipitis CBS 6054 2 1
No Yes Candida guilliermondii ATCC 6260 2 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0 2 1
No Yes Debaromyces hansenii 2 1
No Yes Wickerhamomyces anomalus 2 1
No Yes Pichia pastoris GS115 2 1
No Yes Yarrowia lipolytica CLIB122 1 1
No Yes Candida lusitaniae ATCC 42720 2 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0 2 1
No Yes Vanderwaltozyma polyspora DSM 70294 2 1
No Yes Candida glabrata CBS138 2 1
No Yes Kluyveromyces thermotolerans CBS 6340 2 1
No Yes Lachancea kluyveri 2 1
No Yes Kluyveromyces waltii 1 1
No Yes Ashbya gossypii ATCC 10895 1 1
No Yes Zygosaccharomyces rouxii 1 1
No Yes Saccharomyces mikatae MIT 1 1
No Yes Saccharomyces paradoxus MIT 1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT 1 1
No Yes Kluyveromyces lactis 2 1
No Yes Catenaria anguillulae PL171 v1.0 2 1
No Yes Allomyces macrogynus ATCC 38327 1 1
No Yes Spizellomyces punctatus DAOM BR117 2 2
No Yes Dictyostelium discoideum 2 2
No Yes Dictyostelium purpureum 1 1
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221 3 3
No Yes Citrus clementina v165 2 1
No Yes Citrus sinensis v154 Sweet orange 7 6
No Yes Thellungiella halophila v173 1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183 1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Aquilegia coerulea v195 2 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Brachypodium distachyon Stiff brome 4 4
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza glumaepatula 22 2 2
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22 1 1
No Yes Oryza nivara 22 2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 3 3
No Yes Zea mays subsp. mays Maize 2 2
No Yes Zea mays v181 Maize 2 2
No Yes Sorghum bicolor Sorghum 1 1
No Yes Amborella trichopoda 22 1 1
No Yes Physcomitrella patens 1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2 1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0 1 1
No Yes Chlorella vulgaris 1 1
No Yes Chlamydomonas reinhardtii 4.0 1 1
No Yes Pythium iwayamai DAOM BR242034 22 1 1
No Yes Pythium arrhenomanes ATCC 12531 22 1 1
No Yes Pythium ultimum v1.7-2 1 1
No Yes Pythium aphanidermatum DAOM BR444 22 1 1
No Yes Pythium irregulare DAOM BR486 22 1 1
No Yes Pythium vexans DAOM BR484 22 1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1 1 1
No Yes Phytophthora infestans T30-4 1 1
No Yes Phytophthora capsici 1 1
No Yes Hyaloperonospora arabidopsidis 22 2 2
No Yes Perkinsus marinus ATCC 50983 1 1
No Yes Paramecium tetraurelia 2 2
No Yes Tetrahymena thermophila SB210 1 1 1
No Yes Ichthyophthirius multifiliis strain G5 1 1
No Yes Conexibacter woesei DSM 14684 3 3
No Yes Ilumatobacter coccineus 2 2
No Yes Acidimicrobium ferrooxidans DSM 10331 1 1
No Yes Thermobispora bispora DSM 43833 4 3
No Yes Nakamurella multipartita DSM 44233 1 1
No Yes Modestobacter marinus 2 2
No Yes Blastococcus saxobsidens DD2 3 3
No Yes Geodermatophilus obscurus DSM 43160 1 1
No Yes Catenulispora acidiphila DSM 44928 3 3
No Yes Stackebrandtia nassauensis DSM 44728 1 1
No Yes Frankia sp. EAN1pec 3 2
No Yes Frankia alni ACN14a 1 1
No Yes Thermobifida fusca YX 1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 1 1
No Yes Thermomonospora curvata DSM 43183 2 2
No Yes Streptosporangium roseum DSM 43021 1 1
No Yes Kitasatospora setae KM-6054 3 3
No Yes Streptomyces coelicolor A3(2) 2 2
No Yes Streptomyces sp. PAMC26508 2 2
No Yes Streptomyces flavogriseus ATCC 33331 2 2
No Yes Streptomyces sp. SirexAA-E 1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350 2 2
No Yes Streptomyces bingchenggensis BCW-1 1 1
No Yes Streptomyces violaceusniger Tu 4113 3 3
No Yes Streptomyces avermitilis MA-4680 1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488 2 2
No Yes Streptomyces scabiei 87.22 2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008 4 4
No Yes Actinosynnema mirum DSM 43827 1 1
No Yes Saccharomonospora viridis DSM 43017 1 1
No Yes Pseudonocardia dioxanivorans CB1190 2 2
No Yes Saccharopolyspora erythraea NRRL 2338 1 1
No Yes Amycolatopsis mediterranei U32 2 2
No Yes Kribbella flavida DSM 17836 1 1
No Yes Nocardioides sp. JS614 2 2
No Yes Salinispora arenicola CNS-205 1 1
No Yes Salinispora tropica CNB-440 2 2
No Yes Verrucosispora maris AB-18-032 2 2
No Yes Micromonospora sp. L5 1 1
No Yes Actinoplanes sp. N902-109 2 2
No Yes Actinoplanes sp. SE50/110 1 1
No Yes Actinoplanes missouriensis 431 1 1
No Yes Tsukamurella paurometabola DSM 20162 2 2
No Yes Gordonia sp. KTR9 5 4
No Yes Gordonia polyisoprenivorans VH2 2 2
No Yes Gordonia bronchialis DSM 43247 3 2
No Yes Rhodococcus jostii RHA1 9 8
No Yes Rhodococcus equi 103S 1 1
No Yes Rhodococcus opacus B4 8 7
No Yes Rhodococcus erythropolis PR4 7 6
No Yes Nocardia cyriacigeorgica GUH-2 2 2
No Yes Nocardia farcinica IFM 10152 1 1
No Yes Amycolicicoccus subflavus DQS3-9A1 4 3
No Yes Mycobacterium massiliense str. GO 06 2 2
No Yes Mycobacterium abscessus ATCC 19977 1 1
No Yes Mycobacterium sp. JLS 5 4
No Yes Mycobacterium intracellulare ATCC 13950 7 6
No Yes Mycobacterium avium 104 9 7
No Yes Mycobacterium vanbaalenii PYR-1 5 4
No Yes Mycobacterium canettii CIPT 140010059 3 2
No Yes Mycobacterium africanum GM041182 3 2
No Yes Mycobacterium tuberculosis KZN 1435 3 2
No Yes Mycobacterium tuberculosis 3 2
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2 3 2
No Yes Mycobacterium rhodesiae NBB3 4 3
No Yes Mycobacterium ulcerans Agy99 3 2
No Yes Mycobacterium gilvum PYR-GCK 4 3
No Yes Mycobacterium chubuense NBB4 4 3
No Yes Mycobacterium marinum M 3 2
No Yes Mycobacterium smegmatis str. MC2 155 4 3
No Yes Mycobacterium leprae Br4923 2 1
No Yes Corynebacterium glutamicum R 1 1
No Yes Microbacterium testaceum StLB037 1 1
No Yes Intrasporangium calvum DSM 43043 1 1
No Yes Cellulomonas flavigena DSM 20109 1 1
No Yes Cellulomonas fimi ATCC 484 1 1
No Yes Arthrobacter aurescens TC1 1 1
No Yes Rothia dentocariosa ATCC 17931 1 1
No Yes Arthrobacter sp. Rue61a 1 1
No Yes Arthrobacter sp. FB24 1 1
No Yes Sphaerobacter thermophilus DSM 20745 1 1
No Yes Herpetosiphon aurantiacus DSM 785 1 1
No Yes Deinococcus deserti VCD115 1 1
No Yes Deinococcus maricopensis DSM 21211 1 1
No Yes Deinococcus geothermalis DSM 11300 1 1
No Yes Deinococcus radiodurans R1 1 1
No Yes Kyrpidia tusciae DSM 2912 1 1
No Yes Belliella baltica DSM 15883 1 1
No Yes Cyclobacterium marinum DSM 745 1 1
No Yes Marivirga tractuosa DSM 4126 1 1
No Yes Fibrella aestuarina 1 1
No Yes Spirosoma linguale DSM 74 1 1
No Yes Runella slithyformis DSM 19594 1 1
No Yes Paludibacter propionicigenes WB4 1 1
No Yes Prevotella melaninogenica ATCC 25845 1 1
No Yes Prevotella intermedia 17 1 1
No Yes Prevotella denticola F0289 1 1
No Yes Prevotella ruminicola 23 1 1
No Yes Bacteroides salanitronis DSM 18170 1 1
No Yes Bacteroides helcogenes P 36-108 1 1
No Yes Bacteroides vulgatus ATCC 8482 1 1
No Yes Pedobacter saltans DSM 12145 1 1
No Yes Maribacter sp. HTCC2170 1 1
No Yes Polaribacter sp. MED152 1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550 1 1
No Yes Leptospira interrogans serovar Lai str. IPAV 1 1
No Yes Candidatus Chloracidobacterium thermophilum B 1 1
No Yes Desulfarculus baarsii DSM 2075 1 1
No Yes Desulfatibacillum alkenivorans AK-01 1 1
No Yes Desulfobacterium autotrophicum HRM2 1 1
No Yes Geobacter sulfurreducens KN400 1 1
No Yes Geobacter metallireducens GS-15 1 1
No Yes Methylibium petroleiphilum PM1 1 1
No Yes Burkholderia phytofirmans PsJN 2 2
No Yes Burkholderia phymatum STM815 1 1
No Yes Burkholderia xenovorans LB400 1 1
No Yes Ralstonia eutropha JMP134 4 4
No Yes Cupriavidus taiwanensis LMG 19424 3 3
No Yes Cupriavidus metallidurans CH34 2 2
No Yes Cupriavidus necator N-1 3 3
No Yes Ralstonia eutropha H16 3 3
No Yes Ralstonia pickettii 12D 1 1
No Yes Ralstonia solanacearum CFBP2957 1 1
No Yes Burkholderia sp. RPE64 1 1
No Yes Burkholderia sp. CCGE1002 1 1
No Yes Burkholderia thailandensis E264 1 1
No Yes Burkholderia pseudomallei 1106a 1 1
No Yes Burkholderia mallei SAVP1 1 1
No Yes Burkholderia ambifaria AMMD 1 1
No Yes Burkholderia cenocepacia HI2424 1 1
No Yes Burkholderia multivorans ATCC 17616 1 1
No Yes Burkholderia vietnamiensis G4 1 1
No Yes Burkholderia gladioli BSR3 1 1
No Yes Burkholderia glumae BGR1 1 1
No Yes Verminephrobacter eiseniae EF01-2 1 1
No Yes Ramlibacter tataouinensis TTB310 1 1
No Yes Delftia sp. Cs1-4 1 1
No Yes Delftia acidovorans SPH-1 1 1
No Yes Polaromonas sp. JS666 1 1
No Yes Polaromonas naphthalenivorans CJ2 1 1
No Yes Variovorax paradoxus S110 1 1
No Yes Rhodoferax ferrireducens T118 1 1
No Yes Acidovorax ebreus TPSY 1 1
No Yes Acidovorax sp. KKS102 1 1
No Yes Acidovorax sp. JS42 1 1
No Yes Acidovorax citrulli AAC00-1 1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860 1 1
No Yes Comamonas testosteroni CNB-2 2 2
No Yes Herminiimonas arsenicoxydans 1 1
No Yes Janthinobacterium sp. Marseille 1 1
No Yes Herbaspirillum seropedicae SmR1 1 1
No Yes Pusillimonas sp. T7-7 1 1
No Yes Advenella kashmirensis WT001 2 2
No Yes Bordetella pertussis Tohama I 1 1
No Yes Bordetella parapertussis 12822 1 1
No Yes Bordetella bronchiseptica RB50 2 2
No Yes Achromobacter xylosoxidans A8 2 2
No Yes Brevundimonas subvibrioides ATCC 15264 1 1
No Yes Caulobacter sp. K31 1 1
No Yes Caulobacter crescentus NA1000 1 1
No Yes Caulobacter segnis ATCC 21756 1 1
No Yes Phenylobacterium zucineum HLK1 2 2
No Yes Erythrobacter litoralis HTCC2594 1 1
No Yes Sphingopyxis alaskensis RB2256 1 1
No Yes Novosphingobium sp. PP1Y 1 1
No Yes Novosphingobium aromaticivorans DSM 12444 2 2
No Yes Sphingobium japonicum UT26S 1 1
No Yes Sphingobium chlorophenolicum L-1 2 2
No Yes Sphingomonas sp. MM-1 2 2
No Yes Sphingomonas wittichii RW1 1 1
No Yes Maricaulis maris MCS10 1 1
No Yes Hyphomonas neptunium ATCC 15444 1 1
No Yes Tistrella mobilis KA081020-065 2 2
No Yes Rhodospirillum centenum SW 1 1
No Yes Azospirillum sp. B510 1 1
No Yes Acidiphilium multivorum AIU301 1 1
No Yes Acidiphilium cryptum JF-5 1 1
No Yes Methylobacterium sp. 4-46 1 1
No Yes Methylobacterium nodulans ORS 2060 1 1
No Yes Parvibaculum lavamentivorans DS-1 2 2
No Yes Ochrobactrum anthropi ATCC 49188 1 1
No Yes Brucella microti CCM 4915 1 1
No Yes Brucella pinnipedialis B2/94 1 1
No Yes Brucella canis ATCC 23365 1 1
No Yes Brucella suis ATCC 23445 1 1
No Yes Brucella melitensis ATCC 23457 1 1
No Yes Brucella ovis ATCC 25840 1 1
No Yes Brucella abortus S19 1 1
No Yes Sinorhizobium fredii NGR234 1 1
No Yes Sinorhizobium medicae WSM419 1 1
No Yes Sinorhizobium meliloti AK83 2 2
No Yes Rhizobium etli CIAT 652 1 1
No Yes Rhizobium leguminosarum bv. viciae 3841 2 2
No Yes Agrobacterium vitis S4 1 1
No Yes Mesorhizobium sp. BNC1 1 1
No Yes Mesorhizobium opportunistum WSM2075 2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271 2 2
No Yes Mesorhizobium loti MAFF303099 2 2
No Yes Rhodopseudomonas palustris BisA53 1 1
No Yes Nitrobacter winogradskyi Nb-255 1 1
No Yes Bradyrhizobium japonicum USDA 110 3 3
No Yes Bradyrhizobium sp. ORS 278 2 2
No Yes Bartonella tribocorum CIP 105476 1 1
No Yes Bartonella clarridgeiae 73 1 1
No Yes Bartonella henselae str. Houston-1 1 1
No Yes Bartonella grahamii as4aup 1 1
No Yes Bartonella quintana str. Toulouse 1 1
No Yes Bartonella bacilliformis KC583 1 1
No Yes Aeromonas veronii B565 1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449 1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966 2 2
No Yes Vibrio fischeri MJ11 1 1
No Yes Vibrio harveyi ATCC BAA-1116 1 1
No Yes Vibrio parahaemolyticus RIMD 2210633 1 1
No Yes Photobacterium profundum SS9 1 1
No Yes Psychromonas ingrahamii 37 1 1
No Yes Psychromonas sp. CNPT3 1 1
No Yes Ferrimonas balearica DSM 9799 1 1
No Yes Shewanella halifaxensis HAW-EB4 2 2
No Yes Shewanella pealeana ATCC 700345 2 2
No Yes Colwellia psychrerythraea 34H 1 1
No Yes Pseudoalteromonas haloplanktis TAC125 1 1
No Yes Glaciecola sp. 4H-3-7+YE-5 1 1
No Yes Alcanivorax borkumensis SK2 2 2
No Yes gamma proteobacterium HdN1 3 3
No Yes Pseudomonas sp. TKP 1 1
No Yes Pseudomonas sp. UW4 2 2
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421 1 1
No Yes Pseudomonas entomophila L48 1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000 1 1
No Yes Pseudomonas stutzeri A1501 1 1
No Yes Pseudomonas putida F1 1 1
No Yes Pseudomonas protegens Pf-5 1 1
No Yes Pseudomonas fluorescens SBW25 1 1
No Yes Pseudomonas mendocina ymp 1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14 1 1
No Yes Pseudomonas sp. VLB120 1 1
No Yes Acinetobacter calcoaceticus PHEA-2 1 1
No Yes Cycloclasticus sp. P1 1 1
No Yes Ferroglobus placidus DSM 10642 2 2
No Yes Archaeoglobus fulgidus DSM 4304 3 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 5 3
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 2 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 1
No Yes Cryptococcus neoformans var. grubii H99 1 1
No Yes Cryptococcus neoformans B-3501A 1 1
No Yes Cryptococcus neoformans JEC21 1 1
No Yes Paracoccidioides brasiliensis Pb01 1 1
No Yes Paracoccidioides brasiliensis Pb03 1 1
No Yes Coccidioides posadasii str. Silveira 1 1
No Yes Coccidioides immitis RMSCC 3703 1 1
No Yes Coccidioides immitis RMSCC 2394 1 1
No Yes Coccidioides immitis H538.4 1 1
No Yes Ajellomyces dermatitidis ER-3 1 1
No Yes Histoplasma capsulatum H143 1 1
No Yes Histoplasma capsulatum H88 2 1
No Yes Histoplasma capsulatum G186AR 2 1
No Yes Aspergillus fumigatus A1163 1 1
No Yes Candida albicans WO-1 2 1
No Yes Saccharomyces cerevisiae UC5 1 1
No Yes Saccharomyces cerevisiae PW5 1 1
No Yes Saccharomyces cerevisiae FL100 1 1
No Yes Saccharomyces cerevisiae CBS7960 1 1
No Yes Saccharomyces cerevisiae YJM269 1 1
No Yes Saccharomyces cerevisiae T7 1 1
No Yes Saccharomyces cerevisiae FostersB 1 1
No Yes Saccharomyces cerevisiae FostersO 1 1
No Yes Saccharomyces cerevisiae VL3 1 1
No Yes Saccharomyces cerevisiae Vin13 1 1
No Yes Saccharomyces cerevisiae LalvinQA23 1 1
No Yes Saccharomyces cerevisiae AWRI796 1 1
No Yes Saccharomyces cerevisiae Sigma1278b 1 1
No Yes Saccharomyces cerevisiae W303 1 1
No Yes Saccharomyces cerevisiae JAY291 1 1
No Yes Saccharomyces cerevisiae AWRI1631 1 1
No Yes Saccharomyces cerevisiae YPS163 1 1
No Yes Saccharomyces cerevisiae CLIB215 1 1
No Yes Saccharomyces cerevisiae YJM789 1 1
No Yes Saccharomyces cerevisiae YJM789 1 1
No Yes Saccharomyces cerevisiae RM11-1a 1 1
No Yes Saccharomyces cerevisiae RM11-1a 1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Batrachochytrium dendrobatidis JEL423 1 1
No Yes Batrachochytrium dendrobatidis JAM81 1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Frankia sp. EuI1c 3 2
No Yes Nocardiopsis alba ATCC BAA-2165 1 1
No Yes Streptomyces albus J1074 2 2
No Yes Streptomyces rapamycinicus NRRL 5491 3 3
No Yes Streptomyces davawensis JCM 4913 2 2
No Yes Streptomyces fulvissimus DSM 40593 2 2
No Yes Streptomyces venezuelae ATCC 10712 2 2
No Yes Streptomyces collinus Tu 365 1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488 2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01 4 4
No Yes Saccharothrix espanaensis DSM 44229 1 1
No Yes Amycolatopsis mediterranei RB 2 2
No Yes Amycolatopsis mediterranei S699 2 2
No Yes Amycolatopsis mediterranei S699 2 2
No Yes Amycolatopsis orientalis HCCB10007 1 1
No Yes Rhodococcus pyridinivorans SB3094 3 2
No Yes Rhodococcus erythropolis CCM2595 7 6
No Yes Nocardia brasiliensis ATCC 700358 1 1
No Yes Mycobacterium sp. MOTT36Y 6 5
No Yes Mycobacterium sp. JDM601 4 3
No Yes Mycobacterium abscessus subsp. bolletii 50594 2 2
No Yes Mycobacterium liflandii 128FXT 3 2
No Yes Mycobacterium sp. KMS 4 3
No Yes Mycobacterium sp. MCS 4 3
No Yes Mycobacterium yongonense 05-1390 6 5
No Yes Mycobacterium intracellulare MOTT-64 10 8
No Yes Mycobacterium indicus pranii MTCC 9506 7 6
No Yes Mycobacterium intracellulare MOTT-02 7 6
No Yes Mycobacterium avium subsp. paratuberculosis MAP4 5 4
No Yes Mycobacterium avium subsp. paratuberculosis K-10 5 4
No Yes Mycobacterium canettii CIPT 140070017 3 2
No Yes Mycobacterium canettii CIPT 140060008 3 2
No Yes Mycobacterium canettii CIPT 140070008 3 2
No Yes Mycobacterium canettii CIPT 140070010 3 2
No Yes Mycobacterium tuberculosis EAI5/NITR206 3 2
No Yes Mycobacterium tuberculosis EAI5 3 2
No Yes Mycobacterium tuberculosis CAS/NITR204 3 2
No Yes Mycobacterium tuberculosis str. Beijing/NITR203 3 2
No Yes Mycobacterium tuberculosis UT205 3 2
No Yes Mycobacterium tuberculosis RGTB423 2 2
No Yes Mycobacterium tuberculosis RGTB327 3 2
No Yes Mycobacterium tuberculosis CTRI-2 3 2
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801 3 2
No Yes Mycobacterium tuberculosis KZN 605 3 2
No Yes Mycobacterium tuberculosis KZN 4207 3 2
No Yes Mycobacterium tuberculosis CCDC5180 3 2
No Yes Mycobacterium tuberculosis CCDC5079 3 2
No Yes Mycobacterium tuberculosis CCDC5079 3 2
No Yes Mycobacterium tuberculosis H37Ra 3 2
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202 1 1
No Yes Mycobacterium tuberculosis str. Haarlem 3 2
No Yes Mycobacterium tuberculosis F11 3 2
No Yes Mycobacterium tuberculosis H37Rv 3 2
No Yes Mycobacterium tuberculosis CDC1551 3 2
No Yes Mycobacterium bovis AF2122/97 3 2
No Yes Mycobacterium bovis BCG str. Korea 1168P 3 2
No Yes Mycobacterium bovis BCG str. Mexico 3 2
No Yes Mycobacterium bovis BCG str. Tokyo 172 3 2
No Yes Mycobacterium gilvum Spyr1 4 3
No Yes Mycobacterium smegmatis str. MC2 155 4 3
No Yes Mycobacterium leprae TN 2 1
No Yes Mycobacterium kansasii ATCC 12478 4 3
No Yes Corynebacterium glutamicum MB001 1 1
No Yes Corynebacterium glutamicum SCgG2 2 2
No Yes Corynebacterium glutamicum SCgG1 2 2
No Yes Corynebacterium glutamicum ATCC 13032 1 1
No Yes Corynebacterium glutamicum ATCC 13032 1 1
No Yes Corynebacterium glutamicum ATCC 13032 1 1
No Yes Deinococcus peraridilitoris DSM 19664 1 1
No Yes Echinicola vietnamensis DSM 17526 1 1
No Yes Emticicia oligotrophica DSM 17448 1 1
No Yes Prevotella sp. oral taxon 299 str. F0039 1 1
No Yes Prevotella dentalis DSM 3688 1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 1 1
No Yes Leptospira interrogans serovar Lai str. 56601 1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 1 1
No Yes Geobacter sulfurreducens PCA 1 1
No Yes Burkholderia phenoliruptrix BR3459a 1 1
No Yes Ralstonia pickettii 12J 1 1
No Yes Ralstonia solanacearum FQY_4 1 1
No Yes Ralstonia solanacearum Po82 1 1
No Yes Ralstonia solanacearum PSI07 1 1
No Yes Ralstonia solanacearum CMR15 1 1
No Yes Ralstonia solanacearum GMI1000 1 1
No Yes Burkholderia sp. CCGE1003 2 2
No Yes Burkholderia sp. CCGE1001 2 2
No Yes Burkholderia sp. KJ006 1 1
No Yes Burkholderia thailandensis MSMB121 1 1
No Yes Burkholderia pseudomallei MSHR305 1 1
No Yes Burkholderia pseudomallei NCTC 13179 1 1
No Yes Burkholderia pseudomallei BPC006 1 1
No Yes Burkholderia pseudomallei 1026b 1 1
No Yes Burkholderia pseudomallei MSHR346 1 1
No Yes Burkholderia pseudomallei 668 1 1
No Yes Burkholderia pseudomallei 1710b 1 1
No Yes Burkholderia pseudomallei K96243 1 1
No Yes Burkholderia mallei NCTC 10229 1 1
No Yes Burkholderia mallei NCTC 10247 1 1
No Yes Burkholderia mallei ATCC 23344 1 1
No Yes Burkholderia lata 3 3
No Yes Burkholderia ambifaria MC40-6 1 1
No Yes Burkholderia cenocepacia MC0-3 1 1
No Yes Burkholderia cenocepacia AU 1054 1 1
No Yes Burkholderia cenocepacia J2315 2 2
No Yes Burkholderia multivorans ATCC 17616 1 1
No Yes Burkholderia cepacia GG4 2 2
No Yes Variovorax paradoxus B4 1 1
No Yes Variovorax paradoxus EPS 1 1
No Yes Bordetella pertussis CS 1 1
No Yes Bordetella parapertussis 18323 1 1
No Yes Bordetella parapertussis Bpp5 2 2
No Yes Bordetella bronchiseptica MO149 2 2
No Yes Bordetella bronchiseptica 253 2 2
No Yes Caulobacter crescentus CB15 1 1
No Yes Brucella ceti TE10759-12 1 1
No Yes Brucella ceti TE28753-12 1 1
No Yes Brucella canis HSK A52141 1 1
No Yes Brucella suis VBI22 1 1
No Yes Brucella suis 1330 1 1
No Yes Brucella suis 1330 1 1
No Yes Brucella melitensis NI 1 1
No Yes Brucella melitensis M5-90 1 1
No Yes Brucella melitensis M28 1 1
No Yes Brucella melitensis bv. 1 str. 16M 1 1
No Yes Brucella abortus A13334 1 1
No Yes Brucella melitensis biovar Abortus 2308 1 1
No Yes Brucella abortus bv. 1 str. 9-941 1 1
No Yes Sinorhizobium fredii USDA 257 1 1
No Yes Sinorhizobium fredii HH103 1 1
No Yes Sinorhizobium meliloti 2011 1 1
No Yes Sinorhizobium meliloti GR4 1 1
No Yes Sinorhizobium meliloti Rm41 1 1
No Yes Sinorhizobium meliloti SM11 2 2
No Yes Sinorhizobium meliloti BL225C 2 2
No Yes Sinorhizobium meliloti 1021 2 2
No Yes Rhizobium etli CFN 42 1 1
No Yes Rhizobium etli bv. mimosae str. Mim1 1 1
No Yes Rhizobium tropici CIAT 899 1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304 2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325 2 2
No Yes Mesorhizobium australicum WSM2073 2 2
No Yes Rhodopseudomonas palustris DX-1 1 1
No Yes Rhodopseudomonas palustris TIE-1 2 2
No Yes Rhodopseudomonas palustris HaA2 1 1
No Yes Rhodopseudomonas palustris BisB5 2 2
No Yes Rhodopseudomonas palustris BisB18 1 1
No Yes Rhodopseudomonas palustris CGA009 2 2
No Yes Bradyrhizobium sp. S23321 2 2
No Yes Bradyrhizobium sp. BTAi1 2 2
No Yes Bradyrhizobium oligotrophicum S58 3 3
No Yes Bradyrhizobium japonicum USDA 6 3 3
No Yes Bartonella australis Aust/NH1 1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie 1 1
No Yes Bartonella quintana RM-11 1 1
No Yes Simiduia agarivorans SA1 = DSM 21679 1 1
No Yes Aeromonas hydrophila ML09-119 2 2
No Yes Vibrio fischeri ES114 1 1
No Yes Vibrio sp. EJY3 1 1
No Yes Vibrio parahaemolyticus BB22OP 1 1
No Yes Vibrio cholerae LMA3984-4 1 1
No Yes Alcanivorax dieselolei B5 1 1
No Yes Pseudomonas denitrificans ATCC 13867 1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A 1 1
No Yes Pseudomonas syringae pv. syringae B728a 1 1
No Yes Pseudomonas stutzeri CCUG 29243 1 1
No Yes Pseudomonas stutzeri DSM 10701 1 1
No Yes Pseudomonas stutzeri DSM 4166 1 1
No Yes Pseudomonas stutzeri RCH2 1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199 1 1
No Yes Pseudomonas monteilii SB3101 1 1
No Yes Pseudomonas monteilii SB3078 1 1
No Yes Pseudomonas putida H8234 2 2
No Yes Pseudomonas putida HB3267 1 1
No Yes Pseudomonas putida NBRC 14164 2 2
No Yes Pseudomonas putida DOT-T1E 1 1
No Yes Pseudomonas putida S16 1 1
No Yes Pseudomonas putida BIRD-1 1 1
No Yes Pseudomonas putida W619 1 1
No Yes Pseudomonas putida ND6 1 1
No Yes Pseudomonas putida KT2440 1 1
No Yes Pseudomonas putida GB-1 1 1
No Yes Pseudomonas protegens CHA0 1 1
No Yes Pseudomonas poae RE*1-1-14 1 1
No Yes Pseudomonas fluorescens F113 1 1
No Yes Pseudomonas fluorescens A506 1 1
No Yes Pseudomonas fluorescens R124 1 1
No Yes Pseudomonas fluorescens Pf0-1 1 1
No Yes Pseudomonas resinovorans NBRC 106553 3 3
No Yes Pseudomonas mendocina NK-01 1 1
No Yes Pseudomonas aeruginosa SCV20265 1 1
No Yes Pseudomonas aeruginosa MTB-1 1 1
No Yes Pseudomonas aeruginosa LES431 1 1
No Yes Pseudomonas aeruginosa RP73 1 1
No Yes Pseudomonas aeruginosa B136-33 1 1
No Yes Pseudomonas aeruginosa PA1R 1 1
No Yes Pseudomonas aeruginosa PA1 1 1
No Yes Pseudomonas aeruginosa DK2 1 1
No Yes Pseudomonas aeruginosa NCGM2.S1 1 1
No Yes Pseudomonas aeruginosa M18 1 1
No Yes Pseudomonas aeruginosa LESB58 1 1
No Yes Pseudomonas aeruginosa PA7 1 1
No Yes Pseudomonas aeruginosa PAO1 1 1
No Yes Acinetobacter genomosp. 13TU RUH2624 1 1
No Yes Acinetobacter sp. SH024 1 1
No Yes Acinetobacter calcoaceticus ruh2202 1 1
No Yes Acinetobacter baumannii ZW85-1 1 1
No Yes Acinetobacter baumannii BJAB0715 1 1
No Yes Acinetobacter baumannii D1279779 1 1
No Yes Acinetobacter baumannii ATCC 19606 1 1
No Yes Cycloclasticus zancles 7-ME 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 15 8
No Yes Homo sapiens (NCBI version) Human 6 3
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 1
No Yes Heliconius numata (Incomplete) 1 1
No Yes Loa loa v3.3 (Request) Eye worm 2 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 1
No Yes Moniliophthora perniciosa FA553 (Genome survey) 1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft) 4 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex) 3 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC) 1 1
No Yes Homo sapiens 69_37 Human 2 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 1
No Yes Macaca mulatta 69_1 Rhesus monkey 2 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 1
No Yes Otolemur garnettii 69_3 Small-eared galago 2 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 2 1
No Yes Mus musculus 69_38 House mouse 2 1
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 1
No Yes Ochotona princeps 69 American pika 2 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 2 1
No Yes Vicugna pacos 69_1 Alpaca 2 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 1
No Yes Canis familiaris 69_3.1 Dog 2 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 2 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 1
No Yes Pteropus vampyrus 69_1 Large flying fox 2 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 2 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 2 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 1
No Yes Anolis carolinensis 69_2.0 Green anole 2 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 1
No Yes Latimeria chalumnae 69_1 Coelacanth 2 1
No Yes Gadus morhua 69_1 Atlantic cod 2 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 1
No Yes Takifugu rubripes 69_4 Torafugu 2 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 2 1
No Yes Oryzias latipes 69_1 Japanese medaka 2 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 1
No Yes Danio rerio 69_9 Zebrafish 2 1
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 1
No Yes Ciona intestinalis 69 Vase tunicate 2 1
No Yes Drosophila melanogaster 69_5 Fruit fly 2 1
No Yes Caenorhabditis elegans 69_215 Roundworm 2 1
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome) 1 1
No Yes 1_Upper_euphotic (meta-genome) 1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome) 2 2
No Yes 3_Below_base_of_euphotic (meta-genome) 1 1
No Yes 4_050719Q (meta-genome) 2 2
No Yes 5_050719P (meta-genome) 1 1
No Yes 5_Below_upper_mesopelagic (meta-genome) 2 2
No Yes 7_Oxygen_minimum_layer (meta-genome) 1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome) 5 5
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome) 2 2
No Yes Combined (meta-genome) 3 3
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome) 2 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 1 1
No Yes Dump bottom (Dump bottom) (meta-genome) 17 16
No Yes Dump top (Dump top) (meta-genome) 7 7
No Yes Endophytic microbiome from Rice (meta-genome) 1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 2 2
No Yes Fungus garden combined (combined) (meta-genome) 1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 4 4
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome) 1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 11 11
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 2 2
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 3 3
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 3 3
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 3 3
No Yes NCBI 2017_08 genome 41701 34677
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 5 5
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 6 6
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 4 4
No Yes Sludge/Australian, Phrap Assembly (meta-genome) 3 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome) 1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 17 17
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 8 8
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 5 5
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 11 11
No Yes STRING v9.0.5 (STRING) 478 389
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 5 5
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 1 1
No Yes Uniprot 2018_03 genome 10907 9754
No Yes Uranium Contaminated Groundwater FW106 (meta-genome) 1 1
No Yes Global Ocean Sampling Expedition (GOS) 353 353
No Yes NCBI plasmid sequences (Plasmids) 15 15
No Yes PDB chains (SCOP 1.75 ) (PDB) 14 9
No Yes Protein Data Bank (all PDB sequenc) 73 46
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 206 206
No Yes TargetDB (Targets) 28 19