SUPERFAMILY 1.75 HMM library and genome assignments server

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AlbA-like superfamily domain assignments
in
Vanderwaltozyma polyspora DSM 70294


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Select to display   Genome       Domains   Proteins
No Yes ALL   11085 11085
No Yes Homo sapiens 76_38 Human 5 5
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 3 3
No Yes Gorilla gorilla 76_3.1 Western gorilla 3 3
No Yes Pongo abelii 76_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 2 2
No Yes Macaca mulatta 76_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 76_3 Small-eared galago 3 3
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 3 3
No Yes Mus musculus 76_38 House mouse 4 4
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 3 3
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 4
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 3 3
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 3 3
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 2
No Yes Canis familiaris 76_3.1 Dog 3 3
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 76_3 African savanna elephant 3 3
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 3 3
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus laevis African clawed frog 7 7
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Gadus morhua 76_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 76_4 Torafugu 7 7
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 76_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 5 5
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 4 4
No Yes Astyanax mexicanus 76 Mexican tetra 3 3
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2 2
No Yes Octopus bimaculoides 280   3 3
No Yes Crassostrea gigas 22 Pacific oyster 3 3
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 3
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 2
No Yes Lucilia cuprina Australian sheep blowfly 2 2
No Yes Drosophila grimshawi 1.3   3 3
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 4 4
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   1 1
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 5 5
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   2 2
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Mnemiopsis leidyi Sea walnut 2 2
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Hydra vulgaris   1 1
No Yes Trichoplax adhaerens   2 2
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Phycomyces blakesleeanus   3 3
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   1 1
No Yes Rhizomucor miehei CAU432   2 2
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Podospora anserina   1 1
No Yes Blumeria graminis 22   1 1
No Yes Dothistroma septosporum   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   2 2
No Yes Candida glabrata CBS138   2 2
No Yes Zygosaccharomyces rouxii   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   2 2
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   2 2
No Yes Dictyostelium discoideum   3 3
No Yes Dictyostelium purpureum   2 2
No Yes Selaginella moellendorffii   10 10
No Yes Pinus taeda Loblolly pine 13 13
No Yes Picea abies Norway spruce 8 8
No Yes Eucalyptus grandis v201 Rose gum 10 10
No Yes Theobroma cacao B97-61/B2 v1 Cacao 10 9
No Yes Gossypium raimondii v221   32 32
No Yes Citrus clementina v165   14 14
No Yes Citrus sinensis v154 Sweet orange 20 19
No Yes Thellungiella halophila v173   8 8
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 14 14
No Yes Capsella rubella v183   7 7
No Yes Arabidopsis lyrata Lyrate rockcress 6 6
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes Carica papaya Papaya 8 8
No Yes Medicago truncatula Barrel medic 8 8
No Yes Phaseolus vulgaris v186 French bean 9 9
No Yes Glycine max v109 Soybean 16 16
No Yes Cucumis sativus v122 Cucumber 12 12
No Yes Fragaria vesca Wild strawberry 9 9
No Yes Malus domestica v196 Apple 24 21
No Yes Prunus persica v139 Peach 8 8
No Yes Linum usitatissimum v200 Flax 15 15
No Yes Manihot esculenta v147 Cassava 14 14
No Yes Populus trichocarpa v156 Black cottonwood 12 12
No Yes Vitis vinifera Wine grape 9 9
No Yes Mimulus guttatus v140 Spotted monkey flower 6 6
No Yes Solanum lycopersicum v.2.3 Tomato 9 9
No Yes Solanum tuberosum Potato 21 21
No Yes Actinidia chinensis Hongyang   9 9
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   7 7
No Yes Triticum aestivum 22 Bread wheat 28 28
No Yes Aegilops tauschii 22   11 10
No Yes Brachypodium distachyon Stiff brome 14 14
No Yes Oryza barthii 22 African wild rice 10 10
No Yes Oryza meridionalis 22   8 8
No Yes Oryza glumaepatula 22   11 11
No Yes Oryza glaberrima African rice 8 8
No Yes Oryza punctata 22   10 10
No Yes Oryza nivara 22   12 12
No Yes Oryza brachyantha 22 Malo sina 9 9
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 14 14
No Yes Oryza sativa v193 Rice 14 14
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 15
No Yes Panicum virgatum v202 Switchgrass 19 19
No Yes Setaria italica v164 Foxtail millet 11 11
No Yes Zea mays subsp. mays Maize 22 22
No Yes Zea mays v181 Maize 30 30
No Yes Sorghum bicolor Sorghum 9 9
No Yes Musa balbisiana Balbis banana 23 22
No Yes Musa acuminata 22 Wild Malaysian banana 22 22
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   6 6
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   2 2
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Ostreococcus sp. RCC809   2 2
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   2 2
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   2 2
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Cyanophora paradoxa   3 3
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   4 4
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   4 4
No Yes Trypanosoma brucei TREU927 v4.1   4 4
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   3 3
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   2 2
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 2 2
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   2 2
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   8 8
No Yes Paramecium tetraurelia   21 21
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   2 2
No Yes Theileria annulata   2 2
No Yes Plasmodium falciparum 3D7   4 4
No Yes Plasmodium vivax SaI-1 7.0   4 4
No Yes Plasmodium knowlesi strain H   4 4
No Yes Plasmodium yoelii ssp. yoelii 1   3 3
No Yes Plasmodium chabaudi   5 5
No Yes Plasmodium berghei ANKA   5 5
No Yes Symbiodinium minutum clade B1 v1.2   11 11
No Yes Naegleria gruberi   2 2
No Yes Trichomonas vaginalis   3 3
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Nanoarchaeum equitans Kin4-M   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Cenarchaeum symbiosum A   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   3 3
No Yes Nitrosopumilus maritimus SCM1   3 3
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Acidilobus saccharovorans 345-15   3 3
No Yes Fervidicoccus fontis Kam940   2 2
No Yes Pyrolobus fumarii 1A   2 2
No Yes Hyperthermus butylicus DSM 5456   2 2
No Yes Thermogladius cellulolyticus 1633   2 2
No Yes Ignisphaera aggregans DSM 17230   3 3
No Yes Aeropyrum pernix K1   2 2
No Yes Ignicoccus hospitalis KIN4/I   2 2
No Yes Thermosphaera aggregans DSM 11486   2 2
No Yes Staphylothermus hellenicus DSM 12710   2 2
No Yes Staphylothermus marinus F1   2 2
No Yes Desulfurococcus fermentans DSM 16532   2 2
No Yes Desulfurococcus kamchatkensis 1221n   2 2
No Yes Desulfurococcus mucosus DSM 2162   2 2
No Yes Metallosphaera cuprina Ar-4   2 2
No Yes Metallosphaera sedula DSM 5348   2 2
No Yes Acidianus hospitalis W1   2 2
No Yes Sulfolobus tokodaii str. 7   2 2
No Yes Sulfolobus islandicus Y.N.15.51   2 2
No Yes Sulfolobus solfataricus P2   2 2
No Yes Sulfolobus acidocaldarius DSM 639   2 2
No Yes Thermofilum sp. 1910b   3 3
No Yes Thermofilum pendens Hrk 5   3 3
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes Thermoproteus tenax Kra 1   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella conradii HZ254   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   2 2
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Methanocorpusculum labreanum Z   1 1
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Methanopyrus kandleri AV19   2 2
No Yes Ferroglobus placidus DSM 10642   2 2
No Yes Archaeoglobus profundus DSM 5631   2 2
No Yes Archaeoglobus veneficus SNP6   2 2
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Methanococcus aeolicus Nankai-3   1 1
No Yes Methanococcus maripaludis C5   1 1
No Yes Methanococcus voltae A3   1 1
No Yes Methanococcus vannielii SB   1 1
No Yes Methanothermus fervidus DSM 2088   1 1
No Yes Methanothermobacter marburgensis str. Marburg   1 1
No Yes Methanothermobacter thermautotrophicus str. Delta H   1 1
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 7 7
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 2
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Aspergillus fumigatus A1163   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 9 9
No Yes Hordeum vulgare 22 Domesticated barley 13 13
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 10 10
No Yes Trypanosoma brucei Lister 427 v4.1   4 4
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   3 3
No Yes Candidatus Nitrososphaera gargensis Ga9.2   3 3
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   3 3
No Yes Caldisphaera lagunensis DSM 15908   3 3
No Yes Aeropyrum camini SY1 = JCM 12091   2 2
No Yes Sulfolobus islandicus LAL14/1   2 2
No Yes Sulfolobus islandicus REY15A   2 2
No Yes Sulfolobus islandicus HVE10/4   2 2
No Yes Sulfolobus islandicus Y.G.57.14   2 2
No Yes Sulfolobus islandicus L.S.2.15   2 2
No Yes Sulfolobus islandicus M.16.27   2 2
No Yes Sulfolobus islandicus M.14.25   2 2
No Yes Sulfolobus islandicus M.16.4   2 2
No Yes Sulfolobus islandicus L.D.8.5   2 2
No Yes Sulfolobus solfataricus 98/2   2 2
No Yes Sulfolobus acidocaldarius SUSAZ   2 2
No Yes Sulfolobus acidocaldarius Ron12/I   2 2
No Yes Sulfolobus acidocaldarius N8   2 2
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   2 2
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Ferroplasma acidarmanus fer1   1 1
No Yes Methanococcus maripaludis X1   1 1
No Yes Methanococcus maripaludis C6   1 1
No Yes Methanococcus maripaludis C7   1 1
No Yes Methanococcus maripaludis S2   1 1
No Yes Methanobacterium sp. SWAN-1   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 6 6
No Yes Homo sapiens (NCBI version) Human 4 4
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3 3
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 4 4
No Yes Lotus japonicus (Early assembly)   2 2
No Yes Malus x domestica (Duplicate) Apple 24 21
No Yes Ricinus communis (Early assembly) Castor bean 7 7
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   21 18
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 9 9
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 9 9
No Yes Phoenix dactylifera (Early draft) Date palm 6 6
No Yes Homo sapiens 69_37 Human 3 3
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 3 3
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 3
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 3 3
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 3 3
No Yes Mus musculus 69_38 House mouse 3 3
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 3 3
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 4
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 69_2 Rabbit 3 3
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 3 3
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 2
No Yes Canis familiaris 69_3.1 Dog 3 3
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 69_3 African savanna elephant 3 3
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 3 3
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 69_4 Torafugu 5 5
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 69_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 4 4
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes 1_050719N (meta-genome)   2 2
No Yes 2_050719S (meta-genome)   5 5
No Yes 3_050719R (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   1 1
No Yes Bath Hot Springs, filamentous community (meta-genome)   4 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   7 7
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   11 11
No Yes NCBI 2017_08 genome   3432 3431
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   9 8
No Yes Protozoadb 2010_08 (Protozoadb)   76 76
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   324 324
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   4157 4146
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   13 13
No Yes Global Ocean Sampling Expedition (GOS)   74 74
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   43 43
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   110 110
No Yes TargetDB (Targets)   21 21

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