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Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains superfamily domain assignments
in
Vibrio vulnificus YJ016

Assignment details

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Vibrio vulnificus YJ016 has 22 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|37675816|ref|NP_936212.1|   2.09e-17   177-259   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.0000000115   725-797   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37676195|ref|NP_936591.1|   0.000000000000288   187-269   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.0000000000602   711-788   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37676361|ref|NP_936757.1|   0.00000000000034   184-266   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.00000000109   708-788   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37676557|ref|NP_936953.1|   0.0000000000000314   209-290   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.00000000183   746-830   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37676738|ref|NP_937134.1|   4.32e-23   184-273   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  3.79e-20   725-809   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37676978|ref|NP_937374.1|   3.14e-18   716-800   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  4.97e-17   185-269   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37677076|ref|NP_937472.1|   0.0000000000000615   185-266   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.000000275   719-793   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37678221|ref|NP_932830.1|   1.96e-17   701-783   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  4.71e-17   182-263   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37679313|ref|NP_933922.1|   7.06e-17   704-788   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.0000000000000183   183-266   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37679581|ref|NP_934190.1|   0.000000000000837   199-282   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.000000017   729-804   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
gi|37680909|ref|NP_935518.1|   0.000000000118   184-263   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  
  0.0000405   706-788   Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains  

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Select to display   Genome       Domains   Proteins
No Yes ALL   1047658 1047658
No Yes Capitella sp. I   13 13
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 3 3
No Yes Caenorhabditis japonica   3 2
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   4 3
No Yes Thelohanellus kitauei   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 4
No Yes Amphimedon queenslandica   3 2
No Yes Aspergillus zonatus v1.0   2 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Physcomitrella patens   2 2
No Yes Phytophthora capsici   14 7
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Leptolyngbya sp. PCC 7376   7 4
No Yes Pseudanabaena sp. PCC 7367   4 2
No Yes Acaryochloris marina MBIC11017   13 7
No Yes Synechocystis sp. PCC 6803   10 5
No Yes Thermosynechococcus sp. NK55   4 2
No Yes Thermosynechococcus elongatus BP-1   4 2
No Yes Synechococcus sp. PCC 7502   6 3
No Yes Synechococcus sp. PCC 6312   6 3
No Yes Synechococcus sp. CC9311   10 5
No Yes Synechococcus elongatus PCC 7942   4 2
No Yes Microcoleus sp. PCC 7113   6 3
No Yes Trichodesmium erythraeum IMS101   6 3
No Yes Geitlerinema sp. PCC 7407   8 4
No Yes Cyanothece sp. PCC 8802   8 4
No Yes Gloeocapsa sp. PCC 7428   12 6
No Yes Halothece sp. PCC 7418   12 6
No Yes Microcystis aeruginosa NIES-843   8 4
No Yes Gloeobacter violaceus PCC 7421   26 13
No Yes Rivularia sp. PCC 7116   21 11
No Yes Calothrix sp. PCC 7507   10 5
No Yes Anabaena variabilis ATCC 29413   6 3
No Yes 'Nostoc azollae' 0708   2 1
No Yes Nostoc sp. PCC 7107   8 4
No Yes Nostoc punctiforme PCC 73102   18 9
No Yes Nostoc sp. PCC 7120   10 5
No Yes Nostoc sp. PCC 7524   10 5
No Yes Anabaena sp. 90   2 1
No Yes Thermobispora bispora DSM 43833   2 1
No Yes Nakamurella multipartita DSM 44233   2 1
No Yes Stackebrandtia nassauensis DSM 44728   2 1
No Yes Thermobifida fusca YX   2 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   2 1
No Yes Streptosporangium roseum DSM 43021   4 2
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces scabiei 87.22   3 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   2 1
No Yes Amycolatopsis mediterranei U32   2 1
No Yes Kribbella flavida DSM 17836   3 2
No Yes Microlunatus phosphovorus NM-1   2 1
No Yes Salinispora arenicola CNS-205   2 1
No Yes Salinispora tropica CNB-440   2 1
No Yes Verrucosispora maris AB-18-032   2 1
No Yes Micromonospora sp. L5   2 1
No Yes Micromonospora aurantiaca ATCC 27029   2 1
No Yes Actinoplanes sp. N902-109   2 1
No Yes Actinoplanes sp. SE50/110   2 1
No Yes Actinoplanes missouriensis 431   2 1
No Yes Kytococcus sedentarius DSM 20547   2 1
No Yes Microbacterium testaceum StLB037   2 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   2 1
No Yes Brachybacterium faecium DSM 4810   2 1
No Yes Isoptericola variabilis 225   2 1
No Yes Cellulomonas flavigena DSM 20109   2 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter arilaitensis Re117   2 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter sp. FB24   2 1
No Yes Renibacterium salmoninarum ATCC 33209   2 1
No Yes Micrococcus luteus NCTC 2665   2 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 1
No Yes Roseiflexus sp. RS-1   2 1
No Yes Roseiflexus castenholzii DSM 13941   2 1
No Yes Chloroflexus sp. MS-G   2 2
No Yes Chloroflexus sp. Y-400-fl   2 1
No Yes Chloroflexus aggregans DSM 9485   2 1
No Yes Chloroflexus aurantiacus J-10-fl   2 1
No Yes Truepera radiovictrix DSM 17093   2 1
No Yes Deinococcus gobiensis I-0   4 2
No Yes Deinococcus maricopensis DSM 21211   2 1
No Yes Deinococcus geothermalis DSM 11300   4 2
No Yes Deinococcus proteolyticus MRP   2 1
No Yes Deinococcus radiodurans R1   2 1
No Yes Marinithermus hydrothermalis DSM 14884   2 1
No Yes Meiothermus silvanus DSM 9946   2 1
No Yes Meiothermus ruber DSM 1279   2 1
No Yes Thermus sp. CCB_US3_UF1   2 1
No Yes Thermus scotoductus SA-01   2 1
No Yes Thermus thermophilus HB27   2 1
No Yes Veillonella parvula DSM 2008   4 2
No Yes Megasphaera elsdenii DSM 20460   5 3
No Yes Acidaminococcus intestini RyC-MR95   4 2
No Yes Acidaminococcus fermentans DSM 20731   2 1
No Yes Megamonas hypermegale   1 1
No Yes Selenomonas sputigena ATCC 35185   4 2
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   6 3
No Yes Natranaerobius thermophilus JW/NM-WN-LF   5 3
No Yes Symbiobacterium thermophilum IAM 14863   2 1
No Yes Ruminococcus bromii   1 1
No Yes Thermaerobacter marianensis DSM 12885   4 2
No Yes Oscillibacter valericigenes Sjm18-20   2 1
No Yes butyrate-producing bacterium SS3/4   2 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   2 1
No Yes Thermincola potens JR   6 3
No Yes Pelotomaculum thermopropionicum SI   4 2
No Yes Desulfosporosinus acidiphilus SJ4   8 4
No Yes Desulfosporosinus orientis DSM 765   12 6
No Yes Dehalobacter sp. DCA   2 1
No Yes Dehalobacter sp. CF   2 1
No Yes Syntrophobotulus glycolicus DSM 8271   2 1
No Yes Desulfitobacterium hafniense Y51   4 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   4 2
No Yes Desulfotomaculum reducens MI-1   4 2
No Yes Desulfotomaculum acetoxidans DSM 771   10 5
No Yes Desulfotomaculum kuznetsovii DSM 6115   6 3
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   4 2
No Yes Desulfotomaculum ruminis DSM 2154   4 2
No Yes Clostridium difficile 630   2 1
No Yes Clostridium sticklandii DSM 519   4 2
No Yes Clostridium saccharolyticum WM1   2 1
No Yes Eubacterium rectale M104/1   2 1
No Yes Eubacterium rectale ATCC 33656   2 1
No Yes Roseburia hominis A2-183   2 1
No Yes Syntrophothermus lipocalidus DSM 12680   2 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   4 2
No Yes Heliobacterium modesticaldum Ice1   6 3
No Yes Alkaliphilus oremlandii OhILAs   2 1
No Yes Alkaliphilus metalliredigens QYMF   12 6
No Yes Clostridium novyi NT   2 1
No Yes Clostridium ljungdahlii DSM 13528   6 3
No Yes Clostridium kluyveri DSM 555   4 2
No Yes Clostridium beijerinckii NCIMB 8052   12 6
No Yes Clostridium acetobutylicum ATCC 824   2 1
No Yes Mahella australiensis 50-1 BON   2 1
No Yes Thermosediminibacter oceani DSM 16646   2 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 1
No Yes Thermodesulfobium narugense DSM 14796   5 3
No Yes Tepidanaerobacter acetatoxydans Re1   2 1
No Yes Moorella thermoacetica ATCC 39073   2 1
No Yes Ammonifex degensii KC4   2 1
No Yes Acetohalobium arabaticum DSM 5501   2 1
No Yes Halothermothrix orenii H 168   2 1
No Yes Halanaerobium hydrogeniformans   4 2
No Yes Halanaerobium praevalens DSM 2228   2 1
No Yes Exiguobacterium sp. MH3   3 2
No Yes Exiguobacterium sp. AT1b   3 2
No Yes Exiguobacterium sibiricum 255-15   4 2
No Yes Kyrpidia tusciae DSM 2912   6 3
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   2 1
No Yes Brevibacillus brevis NBRC 100599   14 7
No Yes Paenibacillus sp. JDR-2   3 2
No Yes Paenibacillus terrae HPL-003   8 4
No Yes Paenibacillus mucilaginosus 3016   6 3
No Yes Paenibacillus polymyxa M1   6 3
No Yes Bacillus selenitireducens MLS10   5 3
No Yes Solibacillus silvestris StLB046   4 2
No Yes Geobacillus thermoglucosidasius C56-YS93   4 3
No Yes Lysinibacillus sphaericus C3-41   4 2
No Yes Oceanobacillus iheyensis HTE831   2 1
No Yes Anoxybacillus flavithermus WK1   4 2
No Yes Geobacillus thermoleovorans CCB_US3_UF5   2 1
No Yes Geobacillus kaustophilus HTA426   2 1
No Yes Geobacillus sp. GHH01   2 1
No Yes Geobacillus sp. WCH70   4 2
No Yes Geobacillus thermodenitrificans NG80-2   2 1
No Yes Halobacillus halophilus DSM 2266   6 3
No Yes Bacillus sp. JS   2 1
No Yes Bacillus sp. 1NLA3E   5 3
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   2 1
No Yes Bacillus subtilis subsp. subtilis str. 168   2 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 1
No Yes Bacillus halodurans C-125   2 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   3 2
No Yes Bacillus cereus 03BB102   3 2
No Yes Bacillus anthracis str. A0248   3 2
No Yes Bacillus pseudofirmus OF4   4 2
No Yes Bacillus clausii KSM-K16   2 1
No Yes Bacillus cellulosilyticus DSM 2522   5 3
No Yes Bacillus pumilus SAFR-032   3 2
No Yes Bacillus megaterium DSM 319   6 4
No Yes Bacillus coagulans 2-6   2 1
No Yes Macrococcus caseolyticus JCSC5402   2 1
No Yes Staphylococcus pseudintermedius HKU10-03   2 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   2 1
No Yes Staphylococcus lugdunensis HKU09-01   2 1
No Yes Staphylococcus haemolyticus JCSC1435   2 1
No Yes Staphylococcus epidermidis RP62A   2 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   2 1
No Yes Staphylococcus aureus subsp. aureus JH1   2 1
No Yes Staphylococcus aureus   2 1
No Yes Candidatus Cloacamonas acidaminovorans   2 1
No Yes Gemmatimonas aurantiaca T-27   28 14
No Yes Melioribacter roseus P3M   8 4
No Yes Ignavibacterium album JCM 16511   15 8
No Yes Pelodictyon phaeoclathratiforme BU-1   8 4
No Yes Chlorobium luteolum DSM 273   6 3
No Yes Chlorobium chlorochromatii CaD3   6 3
No Yes Chlorobium phaeobacteroides DSM 266   8 4
No Yes Chlorobium phaeovibrioides DSM 265   6 3
No Yes Chlorobium limicola DSM 245   8 4
No Yes Chlorobaculum parvum NCIB 8327   8 4
No Yes Chlorobium tepidum TLS   4 2
No Yes Chloroherpeton thalassium ATCC 35110   12 6
No Yes Prosthecochloris aestuarii DSM 271   10 5
No Yes Haliscomenobacter hydrossis DSM 1100   25 14
No Yes Saprospira grandis str. Lewin   4 2
No Yes Niastella koreensis GR20-10   36 19
No Yes Chitinophaga pinensis DSM 2588   42 21
No Yes Salinibacter ruber M8   16 8
No Yes Rhodothermus marinus DSM 4252   10 6
No Yes Flexibacter litoralis DSM 6794   12 7
No Yes Belliella baltica DSM 15883   19 10
No Yes Cyclobacterium marinum DSM 745   40 21
No Yes Marivirga tractuosa DSM 4126   22 12
No Yes Fibrella aestuarina   34 18
No Yes Leadbetterella byssophila DSM 17132   22 11
No Yes Dyadobacter fermentans DSM 18053   38 19
No Yes Cytophaga hutchinsonii ATCC 33406   22 11
No Yes Spirosoma linguale DSM 74   49 26
No Yes Runella slithyformis DSM 19594   31 17
No Yes Parabacteroides distasonis ATCC 8503   34 18
No Yes Tannerella forsythia ATCC 43037   9 6
No Yes Paludibacter propionicigenes WB4   16 8
No Yes Odoribacter splanchnicus DSM 20712   23 13
No Yes Bacteroides sp. CF50   12 6
No Yes Prevotella melaninogenica ATCC 25845   4 2
No Yes Prevotella intermedia 17   2 1
No Yes Prevotella denticola F0289   4 2
No Yes Prevotella ruminicola 23   4 2
No Yes Porphyromonas asaccharolytica DSM 20707   6 3
No Yes Porphyromonas gingivalis ATCC 33277   6 4
No Yes Alistipes finegoldii DSM 17242   13 7
No Yes Bacteroides salanitronis DSM 18170   13 7
No Yes Bacteroides helcogenes P 36-108   17 10
No Yes Bacteroides vulgatus ATCC 8482   22 12
No Yes Bacteroides thetaiotaomicron VPI-5482   32 18
No Yes Bacteroides fragilis YCH46   29 16
No Yes Pedobacter saltans DSM 12145   17 10
No Yes Solitalea canadensis DSM 3403   20 11
No Yes Pedobacter heparinus DSM 2366   22 12
No Yes Sphingobacterium sp. 21   38 21
No Yes Fluviicola taffensis DSM 16823   24 12
No Yes Owenweeksia hongkongensis DSM 17368   14 7
No Yes Zunongwangia profunda SM-A87   35 18
No Yes Krokinobacter sp. 4H-3-7-5   10 5
No Yes Gramella forsetii KT0803   22 11
No Yes Lacinutrix sp. 5H-3-7-4   10 5
No Yes Maribacter sp. HTCC2170   10 5
No Yes Robiginitalea biformata HTCC2501   16 8
No Yes Croceibacter atlanticus HTCC2559   12 6
No Yes Aequorivita sublithincola DSM 14238   12 6
No Yes Zobellia galactanivorans   12 6
No Yes Muricauda ruestringensis DSM 13258   20 10
No Yes Cellulophaga algicola DSM 14237   18 9
No Yes Cellulophaga lytica DSM 7489   8 4
No Yes Flavobacteriaceae bacterium 3519-10   4 2
No Yes Polaribacter sp. MED152   6 3
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   6 3
No Yes Ornithobacterium rhinotracheale DSM 15997   2 1
No Yes Capnocytophaga canimorsus Cc5   4 2
No Yes Capnocytophaga ochracea DSM 7271   6 3
No Yes Weeksella virosa DSM 16922   8 4
No Yes Flavobacterium indicum GPTSA100-9   14 7
No Yes Flavobacterium psychrophilum JIP02/86   8 4
No Yes Flavobacterium branchiophilum FL-15   8 4
No Yes Flavobacterium columnare ATCC 49512   6 3
No Yes Flavobacterium johnsoniae UW101   31 16
No Yes Fibrobacter succinogenes subsp. succinogenes S85   4 2
No Yes Waddlia chondrophila WSU 86-1044   4 2
No Yes Candidatus Protochlamydia amoebophila UWE25   6 3
No Yes Parachlamydia acanthamoebae UV-7   10 5
No Yes Simkania negevensis Z   6 3
No Yes Phycisphaera mikurensis NBRC 102666   14 7
No Yes Isosphaera pallida ATCC 43644   16 8
No Yes Planctomyces brasiliensis DSM 5305   23 12
No Yes Planctomyces limnophilus DSM 3776   20 10
No Yes Rhodopirellula baltica SH 1   23 12
No Yes Pirellula staleyi DSM 6068   14 7
No Yes Methylacidiphilum infernorum V4   13 8
No Yes Coraliomargarita akajimensis DSM 45221   4 2
No Yes Opitutus terrae PB90-1   24 12
No Yes Akkermansia muciniphila ATCC BAA-835   12 6
No Yes Fretibacterium fastidiosum   2 1
No Yes Thermovirga lienii DSM 17291   4 2
No Yes Aminobacterium colombiense DSM 12261   8 4
No Yes Thermanaerovibrio acidaminovorans DSM 6589   4 2
No Yes Anaerobaculum mobile DSM 13181   2 1
No Yes Turneriella parva DSM 21527   9 5
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   12 6
No Yes Leptospira interrogans serovar Lai str. IPAV   22 12
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   22 12
No Yes Brachyspira murdochii DSM 12563   14 7
No Yes Brachyspira intermedia PWS/A   14 7
No Yes Brachyspira pilosicoli 95/1000   10 5
No Yes Brachyspira hyodysenteriae WA1   14 7
No Yes Borrelia garinii PBi   2 1
No Yes Borrelia bissettii DN127   2 1
No Yes Borrelia afzelii PKo   2 1
No Yes Borrelia recurrentis A1   2 1
No Yes Borrelia duttonii Ly   2 1
No Yes Borrelia crocidurae str. Achema   2 1
No Yes Borrelia turicatae 91E135   2 1
No Yes Borrelia hermsii DAH   2 1
No Yes Spirochaeta smaragdinae DSM 11293   11 6
No Yes Sphaerochaeta pleomorpha str. Grapes   6 3
No Yes Sphaerochaeta globus str. Buddy   6 3
No Yes Spirochaeta caldaria DSM 7334   7 5
No Yes Treponema azotonutricium ZAS-9   7 4
No Yes Treponema primitia ZAS-2   7 4
No Yes Treponema brennaborense DSM 12168   2 1
No Yes Treponema succinifaciens DSM 2489   4 2
No Yes Spirochaeta africana DSM 8902   7 4
No Yes Spirochaeta thermophila DSM 6192   5 3
No Yes Thermodesulfatator indicus DSM 15286   4 2
No Yes Thermodesulfobacterium sp. OPB45   2 1
No Yes Desulfurispirillum indicum S5   16 8
No Yes Calditerrivibrio nitroreducens DSM 19672   6 3
No Yes Denitrovibrio acetiphilus DSM 12809   11 6
No Yes Deferribacter desulfuricans SSM1   6 3
No Yes Flexistipes sinusarabici DSM 4947   7 4
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermotoga sp. RQ2   1 1
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga neapolitana DSM 4359   1 1
No Yes Thermotoga maritima MSB8   2 1
No Yes Thermovibrio ammonificans HB-1   4 2
No Yes Desulfurobacterium thermolithotrophum DSM 11699   6 3
No Yes Sulfurihydrogenibium sp. YO3AOP1   11 6
No Yes Sulfurihydrogenibium azorense Az-Fu1   12 6
No Yes Persephonella marina EX-H1   6 3
No Yes Hydrogenobaculum sp. SN   7 4
No Yes Hydrogenobaculum sp. HO   7 4
No Yes Hydrogenobaculum sp. Y04AAS1   7 4
No Yes Thermocrinis albus DSM 14484   8 4
No Yes Aquifex aeolicus VF5   8 4
No Yes Hydrogenobacter thermophilus TK-6   10 5
No Yes Elusimicrobium minutum Pei191   2 1
No Yes Candidatus Chloracidobacterium thermophilum B   12 6
No Yes Candidatus Solibacter usitatus Ellin6076   38 20
No Yes Granulicella tundricola MP5ACTX9   24 12
No Yes Granulicella mallensis MP5ACTX8   34 17
No Yes Candidatus Koribacter versatilis Ellin345   18 9
No Yes Terriglobus saanensis SP1PR4   36 18
No Yes Terriglobus roseus DSM 18391   40 20
No Yes Acidobacterium capsulatum ATCC 51196   26 13
No Yes Thermodesulfovibrio yellowstonii DSM 11347   6 3
No Yes Candidatus Nitrospira defluvii   25 13
No Yes Leptospirillum ferrooxidans C2-3   19 11
No Yes Sebaldella termitidis ATCC 33386   2 1
No Yes Leptotrichia buccalis C-1013-b   2 1
No Yes Ilyobacter polytropus DSM 2926   8 4
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   5 3
No Yes Candidatus Methylomirabilis oxyfera   10 5
No Yes candidate division SR1 bacterium RAAC1_SR1_1   1 1
No Yes Acidithiobacillus ferrivorans SS3   22 11
No Yes Acidithiobacillus caldus SM-1   24 12
No Yes Acidithiobacillus ferrooxidans ATCC 53993   21 11
No Yes Bacteriovorax marinus SJ   17 9
No Yes Bdellovibrio bacteriovorus HD100   14 7
No Yes Nautilia profundicola AmH   5 3
No Yes Nitratifractor salsuginis DSM 16511   3 3
No Yes Sulfurospirillum deleyianum DSM 6946   7 4
No Yes Sulfurospirillum barnesii SES-3   11 6
No Yes Arcobacter sp. L   13 8
No Yes Arcobacter nitrofigilis DSM 7299   14 9
No Yes Arcobacter butzleri RM4018   13 7
No Yes Campylobacter hominis ATCC BAA-381   2 1
No Yes Campylobacter lari RM2100   4 2
No Yes Campylobacter curvus 525.92   2 1
No Yes Campylobacter concisus 13826   4 2
No Yes Campylobacter jejuni subsp. doylei 269.97   4 2
No Yes Campylobacter sp. 03-427   2 1
No Yes Campylobacter fetus subsp. fetus 82-40   2 1
No Yes uncultured Sulfuricurvum sp. RIFRC-1   11 6
No Yes Sulfuricurvum kujiense DSM 16994   11 7
No Yes Sulfurimonas autotrophica DSM 16294   10 6
No Yes Sulfurimonas denitrificans DSM 1251   12 8
No Yes Wolinella succinogenes DSM 1740   9 5
No Yes Helicobacter cetorum MIT 00-7128   6 3
No Yes Helicobacter bizzozeronii CIII-1   6 3
No Yes Helicobacter hepaticus ATCC 51449   6 3
No Yes Helicobacter mustelae 12198   7 4
No Yes Helicobacter felis ATCC 49179   6 3
No Yes Helicobacter cinaedi PAGU611   6 3
No Yes Helicobacter acinonychis str. Sheeba   6 3
No Yes Helicobacter pylori B38   6 3
No Yes Nitratiruptor sp. SB155-2   8 5
No Yes Sulfurovum sp. NBC37-1   14 9
No Yes Desulfarculus baarsii DSM 2075   14 7
No Yes Desulfobacca acetoxidans DSM 11109   12 6
No Yes Syntrophus aciditrophicus SB   4 2
No Yes Desulfomonile tiedjei DSM 6799   32 16
No Yes Syntrophobacter fumaroxidans MPOB   19 10
No Yes Desulfurivibrio alkaliphilus AHT2   12 6
No Yes Desulfotalea psychrophila LSv54   8 4
No Yes Desulfobulbus propionicus DSM 2032   10 5
No Yes Desulfatibacillum alkenivorans AK-01   10 5
No Yes Desulfobacterium autotrophicum HRM2   19 10
No Yes Desulfococcus oleovorans Hxd3   4 2
No Yes Desulfohalobium retbaense DSM 5692   12 6
No Yes Desulfomicrobium baculatum DSM 4028   14 7
No Yes Desulfovibrio piezophilus   14 7
No Yes Desulfovibrio aespoeensis Aspo-2   16 8
No Yes Lawsonia intracellularis PHE/MN1-00   2 1
No Yes Desulfovibrio magneticus RS-1   16 8
No Yes Desulfovibrio alaskensis G20   12 6
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   10 5
No Yes Desulfovibrio salexigens DSM 2638   20 10
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   8 4
No Yes Desulfovibrio africanus str. Walvis Bay   14 7
No Yes Hippea maritima DSM 10411   4 2
No Yes Geobacter daltonii FRC-32   18 9
No Yes Geobacter sp. M21   8 4
No Yes Geobacter uraniireducens Rf4   20 11
No Yes Geobacter lovleyi SZ   14 7
No Yes Geobacter bemidjiensis Bem   12 6
No Yes Geobacter sulfurreducens KN400   16 8
No Yes Geobacter metallireducens GS-15   14 7
No Yes Pelobacter propionicus DSM 2379   14 7
No Yes Pelobacter carbinolicus DSM 2380   14 7
No Yes Haliangium ochraceum DSM 14365   24 12
No Yes Sorangium cellulosum 'So ce 56'   18 9
No Yes Anaeromyxobacter sp. Fw109-5   18 9
No Yes Anaeromyxobacter dehalogenans 2CP-1   20 10
No Yes Stigmatella aurantiaca DW4/3-1   18 9
No Yes Corallococcus coralloides DSM 2259   20 10
No Yes Myxococcus xanthus DK 1622   28 14
No Yes Myxococcus fulvus HW-1   22 11
No Yes Dechloromonas aromatica RCB   30 15
No Yes Thauera sp. MZ1T   24 12
No Yes Azoarcus sp. KH32C   18 9
No Yes Azoarcus sp. BH72   22 11
No Yes Aromatoleum aromaticum EbN1   12 6
No Yes Dechlorosoma suillum PS   26 13
No Yes Pseudogulbenkiania sp. NH8B   14 7
No Yes Laribacter hongkongensis HLHK9   18 10
No Yes Chromobacterium violaceum ATCC 12472   15 8
No Yes Neisseria meningitidis alpha14   2 1
No Yes Neisseria meningitidis FAM18   2 1
No Yes Neisseria lactamica 020-06   2 1
No Yes Neisseria gonorrhoeae NCCP11945   2 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   32 16
No Yes beta proteobacterium CB   12 6
No Yes Methylibium petroleiphilum PM1   22 12
No Yes Thiomonas arsenitoxydans   16 8
No Yes Thiomonas intermedia K12   16 8
No Yes Rubrivivax gelatinosus IL144   24 12
No Yes Leptothrix cholodnii SP-6   14 7
No Yes Burkholderia rhizoxinica HKI 454   9 5
No Yes Burkholderia phytofirmans PsJN   32 16
No Yes Burkholderia phymatum STM815   32 16
No Yes Burkholderia xenovorans LB400   34 17
No Yes Ralstonia eutropha JMP134   31 16
No Yes Cupriavidus taiwanensis LMG 19424   28 14
No Yes Cupriavidus metallidurans CH34   42 21
No Yes Cupriavidus necator N-1   35 18
No Yes Ralstonia eutropha H16   32 16
No Yes Ralstonia pickettii 12D   31 16
No Yes Ralstonia solanacearum CFBP2957   30 15
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   10 5
No Yes Burkholderia sp. RPE64   26 13
No Yes Burkholderia sp. CCGE1002   38 19
No Yes Burkholderia thailandensis E264   22 11
No Yes Burkholderia pseudomallei 1106a   20 10
No Yes Burkholderia mallei SAVP1   12 6
No Yes Burkholderia ambifaria AMMD   21 11
No Yes Burkholderia cenocepacia HI2424   35 18
No Yes Burkholderia multivorans ATCC 17616   23 12
No Yes Burkholderia vietnamiensis G4   22 11
No Yes Burkholderia gladioli BSR3   36 18
No Yes Burkholderia glumae BGR1   20 10
No Yes Verminephrobacter eiseniae EF01-2   14 7
No Yes Alicycliphilus denitrificans K601   28 14
No Yes Ramlibacter tataouinensis TTB310   13 7
No Yes Delftia sp. Cs1-4   28 14
No Yes Delftia acidovorans SPH-1   46 23
No Yes Polaromonas sp. JS666   20 10
No Yes Polaromonas naphthalenivorans CJ2   27 15
No Yes Variovorax paradoxus S110   20 10
No Yes Rhodoferax ferrireducens T118   14 7
No Yes Acidovorax ebreus TPSY   22 11
No Yes Acidovorax sp. KKS102   26 13
No Yes Acidovorax sp. JS42   18 9
No Yes Acidovorax citrulli AAC00-1   20 10
No Yes Acidovorax avenae subsp. avenae ATCC 19860   24 12
No Yes Comamonas testosteroni CNB-2   32 16
No Yes Herminiimonas arsenicoxydans   20 10
No Yes Collimonas fungivorans Ter331   24 12
No Yes Janthinobacterium sp. Marseille   32 16
No Yes Herbaspirillum seropedicae SmR1   22 11
No Yes Pusillimonas sp. T7-7   12 6
No Yes Advenella kashmirensis WT001   8 4
No Yes Taylorella asinigenitalis MCE3   4 2
No Yes Taylorella equigenitalis MCE9   6 3
No Yes Bordetella petrii DSM 12804   18 10
No Yes Bordetella avium 197N   12 6
No Yes Bordetella pertussis Tohama I   10 5
No Yes Bordetella parapertussis 12822   10 5
No Yes Bordetella bronchiseptica RB50   14 7
No Yes Achromobacter xylosoxidans A8   30 15
No Yes Achromobacter xylosoxidans   26 13
No Yes Thiobacillus denitrificans ATCC 25259   18 9
No Yes Nitrosospira multiformis ATCC 25196   22 11
No Yes Nitrosomonas sp. Is79A3   10 5
No Yes Nitrosomonas eutropha C91   12 6
No Yes Nitrosomonas europaea ATCC 19718   18 9
No Yes Sideroxydans lithotrophicus ES-1   10 5
No Yes Gallionella capsiferriformans ES-2   26 13
No Yes Methylotenera versatilis 301   16 8
No Yes Methylotenera mobilis JLW8   20 10
No Yes Methylovorus sp. MP688   22 11
No Yes Methylovorus glucosetrophus SIP3-4   24 12
No Yes Methylobacillus flagellatus KT   28 15
No Yes Magnetococcus marinus MC-1   18 9
No Yes Parvularcula bermudensis HTCC2503   24 12
No Yes Asticcacaulis excentricus CB 48   16 8
No Yes Brevundimonas subvibrioides ATCC 15264   8 4
No Yes Caulobacter sp. K31   32 16
No Yes Caulobacter crescentus NA1000   14 7
No Yes Caulobacter segnis ATCC 21756   24 12
No Yes Phenylobacterium zucineum HLK1   24 12
No Yes Erythrobacter litoralis HTCC2594   6 3
No Yes Sphingopyxis alaskensis RB2256   18 9
No Yes Novosphingobium sp. PP1Y   16 8
No Yes Novosphingobium aromaticivorans DSM 12444   6 3
No Yes Sphingobium sp. SYK-6   24 12
No Yes Sphingobium japonicum UT26S   17 9
No Yes Sphingobium chlorophenolicum L-1   16 8
No Yes Sphingomonas sp. MM-1   27 14
No Yes Sphingomonas wittichii RW1   16 8
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   8 4
No Yes Maricaulis maris MCS10   20 10
No Yes Hirschia baltica ATCC 49814   14 7
No Yes Hyphomonas neptunium ATCC 15444   20 10
No Yes Dinoroseobacter shibae DFL 12   13 7
No Yes Phaeobacter gallaeciensis 2.10   4 3
No Yes Pseudovibrio sp. FO-BEG1   15 8
No Yes Jannaschia sp. CCS1   8 4
No Yes Ruegeria sp. TM1040   8 4
No Yes Ruegeria pomeroyi DSS-3   7 4
No Yes Ketogulonicigenium vulgare Y25   6 3
No Yes Ketogulonigenium vulgarum WSH-001   8 4
No Yes Roseobacter litoralis Och 149   15 8
No Yes Roseobacter denitrificans OCh 114   9 5
No Yes Rhodobacter sphaeroides ATCC 17029   9 5
No Yes Rhodobacter capsulatus SB 1003   9 5
No Yes Paracoccus denitrificans PD1222   16 9
No Yes Rhodospirillum photometricum DSM 122   10 5
No Yes Tistrella mobilis KA081020-065   19 10
No Yes Magnetospirillum magneticum AMB-1   12 6
No Yes Rhodospirillum centenum SW   22 11
No Yes Rhodospirillum rubrum F11   12 6
No Yes Azospirillum lipoferum 4B   25 13
No Yes Azospirillum sp. B510   22 11
No Yes Azospirillum brasilense Sp245   27 15
No Yes Gluconacetobacter xylinus NBRC 3288   18 10
No Yes Granulibacter bethesdensis CGDNIH1   11 6
No Yes Gluconacetobacter diazotrophicus PAl 5   21 12
No Yes Acidiphilium multivorum AIU301   16 8
No Yes Acidiphilium cryptum JF-5   16 8
No Yes Gluconobacter oxydans 621H   15 8
No Yes Acetobacter pasteurianus IFO 3283-01   14 8
No Yes Polymorphum gilvum SL003B-26A1   12 7
No Yes Micavibrio aeruginosavorus ARL-13   8 4
No Yes Candidatus Puniceispirillum marinum IMCC1322   4 2
No Yes alpha proteobacterium HIMB5   2 1
No Yes alpha proteobacterium HIMB59   2 1
No Yes Candidatus Pelagibacter sp. IMCC9063   2 2
No Yes Neorickettsia sennetsu str. Miyayama   2 1
No Yes Neorickettsia risticii str. Illinois   2 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   1 1
No Yes Wolbachia sp. wRi   1 1
No Yes Ehrlichia chaffeensis str. Arkansas   2 1
No Yes Ehrlichia canis str. Jake   2 1
No Yes Ehrlichia ruminantium str. Gardel   2 1
No Yes Anaplasma phagocytophilum HZ   1 1
No Yes Anaplasma marginale str. Florida   1 1
No Yes Anaplasma centrale str. Israel   1 1
No Yes Rickettsia bellii OSU 85-389   4 2
No Yes Rickettsia canadensis str. McKiel   2 1
No Yes Rickettsia typhi str. Wilmington   2 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   2 1
No Yes Rickettsia philipii str. 364D   4 3
No Yes Rickettsia heilongjiangensis 054   4 3
No Yes Rickettsia peacockii str. Rustic   2 1
No Yes Rickettsia felis URRWXCal2   4 3
No Yes Rickettsia slovaca 13-B   2 1
No Yes Rickettsia parkeri str. Portsmouth   3 2
No Yes Rickettsia massiliae MTU5   2 1
No Yes Rickettsia japonica YH   2 1
No Yes Rickettsia africae ESF-5   2 1
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   2 1
No Yes Rickettsia montanensis str. OSU 85-930   2 1
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   2 1
No Yes Rickettsia australis str. Cutlack   2 1
No Yes Rickettsia akari str. Hartford   1 1
No Yes Rickettsia rickettsii str. 'Sheila Smith'   4 3
No Yes Rickettsia conorii str. Malish 7   4 3
No Yes Starkeya novella DSM 506   18 9
No Yes Xanthobacter autotrophicus Py2   41 21
No Yes Azorhizobium caulinodans ORS 571   22 11
No Yes Methylobacterium chloromethanicum CM4   46 23
No Yes Methylobacterium extorquens AM1   50 25
No Yes Methylobacterium sp. 4-46   32 16
No Yes Methylobacterium populi BJ001   44 22
No Yes Methylobacterium nodulans ORS 2060   40 20
No Yes Methylobacterium radiotolerans JCM 2831   42 21
No Yes Parvibaculum lavamentivorans DS-1   17 9
No Yes Ochrobactrum anthropi ATCC 49188   14 7
No Yes Brucella microti CCM 4915   12 6
No Yes Brucella pinnipedialis B2/94   12 6
No Yes Brucella canis ATCC 23365   10 5
No Yes Brucella suis ATCC 23445   8 4
No Yes Brucella melitensis ATCC 23457   12 6
No Yes Brucella ovis ATCC 25840   8 4
No Yes Brucella abortus S19   10 6
No Yes Sinorhizobium fredii NGR234   26 13
No Yes Sinorhizobium medicae WSM419   16 8
No Yes Sinorhizobium meliloti AK83   18 9
No Yes Genome sequence of Rhizobium sp. strain IRBG74   16 8
No Yes Rhizobium etli CIAT 652   22 11
No Yes Rhizobium leguminosarum bv. viciae 3841   22 11
No Yes Agrobacterium tumefaciens str. C58   20 10
No Yes Agrobacterium radiobacter K84   32 16
No Yes Agrobacterium sp. H13-3   18 9
No Yes Agrobacterium vitis S4   24 12
No Yes Mesorhizobium sp. BNC1   10 5
No Yes Mesorhizobium opportunistum WSM2075   16 8
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   16 8
No Yes Mesorhizobium loti MAFF303099   20 10
No Yes Methylocella silvestris BL2   26 14
No Yes Beijerinckia indica subsp. indica ATCC 9039   20 11
No Yes Pelagibacterium halotolerans B2   7 4
No Yes Rhodomicrobium vannielii ATCC 17100   21 11
No Yes Hyphomicrobium sp. MC1   37 19
No Yes Hyphomicrobium denitrificans ATCC 51888   25 13
No Yes Oligotropha carboxidovorans OM4   36 18
No Yes Rhodopseudomonas palustris BisA53   26 13
No Yes Nitrobacter winogradskyi Nb-255   18 9
No Yes Nitrobacter hamburgensis X14   36 18
No Yes Bradyrhizobium japonicum USDA 110   48 24
No Yes Bradyrhizobium sp. ORS 278   38 20
No Yes Methylocystis sp. SC2   19 10
No Yes Bartonella tribocorum CIP 105476   2 1
No Yes Bartonella clarridgeiae 73   2 1
No Yes Bartonella henselae str. Houston-1   2 1
No Yes Bartonella grahamii as4aup   2 1
No Yes Bartonella quintana str. Toulouse   2 1
No Yes Bartonella bacilliformis KC583   2 1
No Yes Saccharophagus degradans 2-40   18 9
No Yes Teredinibacter turnerae T7901   24 12
No Yes Cellvibrio japonicus Ueda107   16 8
No Yes Aggregatibacter aphrophilus NJ8700   2 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   2 1
No Yes Haemophilus somnus 129PT   2 1
No Yes Gallibacterium anatis UMN179   2 1
No Yes Pasteurella multocida subsp. multocida str. 3480   2 1
No Yes Haemophilus parasuis SH0165   2 1
No Yes Haemophilus ducreyi 35000HP   2 1
No Yes Haemophilus parainfluenzae T3T1   2 1
No Yes Haemophilus influenzae PittEE   2 1
No Yes Actinobacillus succinogenes 130Z   2 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   2 1
No Yes Oceanimonas sp. GK1   12 6
No Yes Tolumonas auensis DSM 9187   10 5
No Yes Aeromonas veronii B565   18 9
No Yes Aeromonas salmonicida subsp. salmonicida A449   14 7
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   16 8
No Yes Aliivibrio salmonicida LFI1238   10 5
No Yes Vibrio fischeri MJ11   20 10
No Yes Vibrio sp. Ex25   24 12
No Yes Vibrio harveyi ATCC BAA-1116   18 9
No Yes Vibrio parahaemolyticus RIMD 2210633   24 12
No Yes Vibrio splendidus LGP32   26 13
No Yes Vibrio anguillarum 775   10 5
No Yes Vibrio furnissii NCTC 11218   18 9
No Yes Vibrio vulnificus MO6-24/O   22 11
No Yes Vibrio cholerae O395   12 6
No Yes Photobacterium profundum SS9   21 11
No Yes Psychromonas ingrahamii 37   11 6
No Yes Psychromonas sp. CNPT3   4 2
No Yes Idiomarina loihiensis L2TR   24 12
No Yes Ferrimonas balearica DSM 9799   29 15
No Yes Shewanella piezotolerans WP3   51 26
No Yes Shewanella loihica PV-4   34 17
No Yes Shewanella halifaxensis HAW-EB4   40 20
No Yes Shewanella sediminis HAW-EB3   44 22
No Yes Shewanella denitrificans OS217   32 17
No Yes Shewanella pealeana ATCC 700345   38 19
No Yes Shewanella oneidensis MR-1   28 14
No Yes Shewanella baltica OS185   30 15
No Yes Shewanella woodyi ATCC 51908   32 16
No Yes Shewanella sp. MR-4   30 15
No Yes Shewanella amazonensis SB2B   26 13
No Yes Shewanella violacea DSS12   32 16
No Yes Shewanella frigidimarina NCIMB 400   30 15
No Yes Shewanella putrefaciens CN-32   40 20
No Yes Colwellia psychrerythraea 34H   38 19
No Yes Pseudoalteromonas sp. SM9913   31 16
No Yes Pseudoalteromonas atlantica T6c   25 13
No Yes Pseudoalteromonas haloplanktis TAC125   21 11
No Yes Glaciecola sp. 4H-3-7+YE-5   31 16
No Yes Glaciecola nitratireducens FR1064   29 15
No Yes Marinobacter adhaerens HP15   22 11
No Yes Marinobacter sp. BSs20148   16 8
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   22 11
No Yes Marinobacter aquaeolei VT8   28 14
No Yes Alteromonas sp. SN2   38 20
No Yes Alteromonas macleodii str. 'Deep ecotype'   34 17
No Yes Kangiella koreensis DSM 16069   14 7
No Yes Hahella chejuensis KCTC 2396   24 12
No Yes Alcanivorax borkumensis SK2   18 9
No Yes Marinomonas posidonica IVIA-Po-181   8 4
No Yes Marinomonas sp. MWYL1   12 6
No Yes Marinomonas mediterranea MMB-1   14 7
No Yes Chromohalobacter salexigens DSM 3043   12 6
No Yes Halomonas elongata DSM 2581   10 5
No Yes Methylomicrobium alcaliphilum   17 9
No Yes Methylomonas methanica MC09   29 15
No Yes Methylococcus capsulatus str. Bath   33 17
No Yes Dichelobacter nodosus VCS1703A   2 1
No Yes Rhodanobacter denitrificans   32 16
No Yes Frateuria aurantia DSM 6220   18 9
No Yes Pseudoxanthomonas spadix BD-a59   16 8
No Yes Pseudoxanthomonas suwonensis 11-1   18 9
No Yes Stenotrophomonas maltophilia K279a   32 16
No Yes Xylella fastidiosa M23   8 4
No Yes Xanthomonas axonopodis pv. citri str. 306   26 13
No Yes Xanthomonas albilineans GPE PC73   18 9
No Yes Xanthomonas oryzae pv. oryzae PXO99A   18 9
No Yes Xanthomonas campestris pv. campestris str. B100   20 10
No Yes Halothiobacillus neapolitanus c2   14 7
No Yes Spiribacter sp. UAH-SP71   7 4
No Yes Alkalilimnicola ehrlichii MLHE-1   16 8
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   21 11
No Yes Thioalkalivibrio sp. K90mix   18 9
No Yes Halorhodospira halophila SL1   10 5
No Yes Allochromatium vinosum DSM 180   22 11
No Yes Thiocystis violascens DSM 198   22 11
No Yes Nitrosococcus watsonii C-113   19 10
No Yes Nitrosococcus halophilus Nc4   20 10
No Yes Nitrosococcus oceani ATCC 19707   23 12
No Yes Coxiella burnetii Dugway 5J108-111   8 4
No Yes Legionella longbeachae NSW150   18 9
No Yes Legionella pneumophila str. Corby   18 9
No Yes gamma proteobacterium HdN1   22 11
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   4 2
No Yes Candidatus Vesicomyosocius okutanii HA   4 2
No Yes Photorhabdus asymbiotica   6 3
No Yes Photorhabdus luminescens subsp. laumondii TTO1   8 4
No Yes Xenorhabdus bovienii SS-2004   8 4
No Yes Xenorhabdus nematophila ATCC 19061   6 3
No Yes Providencia stuartii MRSN 2154   10 5
No Yes Proteus mirabilis HI4320   10 5
No Yes Edwardsiella ictaluri 93-146   8 4
No Yes Edwardsiella tarda EIB202   10 5
No Yes Rahnella sp. Y9602   24 12
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   22 11
No Yes Yersinia pseudotuberculosis IP 31758   14 7
No Yes Yersinia pestis Pestoides F   10 5
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   16 8
No Yes Serratia sp. AS12   16 8
No Yes Serratia sp. ATCC 39006   18 9
No Yes Serratia plymuthica AS9   16 8
No Yes Serratia proteamaculans 568   18 10
No Yes Dickeya dadantii Ech703   12 6
No Yes Dickeya zeae Ech1591   14 7
No Yes Pectobacterium wasabiae WPP163   12 6
No Yes Pectobacterium sp. SCC3193   12 6
No Yes Pectobacterium atrosepticum SCRI1043   14 7
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   14 7
No Yes Sodalis glossinidius str. 'morsitans'   2 1
No Yes Pantoea sp. At-9b   24 12
No Yes Pantoea vagans C9-1   24 12
No Yes Pantoea ananatis LMG 20103   20 10
No Yes Erwinia tasmaniensis Et1/99   12 6
No Yes Erwinia sp. Ejp617   12 6
No Yes Erwinia billingiae Eb661   24 12
No Yes Erwinia pyrifoliae Ep1/96   12 6
No Yes Erwinia amylovora ATCC 49946   12 6
No Yes Escherichia blattae DSM 4481   10 5
No Yes Cronobacter turicensis z3032   12 6
No Yes Cronobacter sakazakii ES15   10 5
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 1
No Yes Enterobacteriaceae bacterium strain FGI 57   16 8
No Yes Shigella sonnei Ss046   12 6
No Yes Shigella flexneri 5 str. 8401   12 6
No Yes Shigella dysenteriae Sd197   10 6
No Yes Shigella boydii CDC 3083-94   8 4
No Yes Salmonella bongori NCTC 12419   14 7
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   10 5
No Yes Klebsiella oxytoca E718   26 13
No Yes Klebsiella variicola At-22   24 12
No Yes Klebsiella pneumoniae NTUH-K2044   24 12
No Yes Enterobacter aerogenes KCTC 2190   18 9
No Yes Escherichia fergusonii ATCC 35469   14 7
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   14 7
No Yes Enterobacter sp. R4-368   18 9
No Yes Enterobacter sp. 638   22 11
No Yes Enterobacter asburiae LF7a   22 11
No Yes Enterobacter cloacae subsp. dissolvens SDM   26 13
No Yes Citrobacter rodentium ICC168   8 4
No Yes Citrobacter koseri ATCC BAA-895   14 7
No Yes Azotobacter vinelandii DJ   20 10
No Yes Pseudomonas sp. TKP   34 17
No Yes Pseudomonas sp. UW4   22 11
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   24 12
No Yes Pseudomonas entomophila L48   24 12
No Yes Pseudomonas syringae pv. tomato str. DC3000   19 10
No Yes Pseudomonas stutzeri A1501   18 9
No Yes Pseudomonas fulva 12-X   14 7
No Yes Pseudomonas putida F1   28 14
No Yes Pseudomonas protegens Pf-5   24 12
No Yes Pseudomonas fluorescens SBW25   30 15
No Yes Pseudomonas mendocina ymp   24 12
No Yes Pseudomonas aeruginosa UCBPP-PA14   28 14
No Yes Pseudomonas sp. VLB120   24 12
No Yes Psychrobacter sp. G   4 2
No Yes Psychrobacter sp. PRwf-1   4 2
No Yes Psychrobacter arcticus 273-4   4 2
No Yes Psychrobacter cryohalolentis K5   4 2
No Yes Moraxella catarrhalis RH4   2 1
No Yes Acinetobacter oleivorans DR1   22 11
No Yes Acinetobacter calcoaceticus PHEA-2   16 9
No Yes Acinetobacter baumannii ATCC 17978   16 9
No Yes Acinetobacter sp. ADP1   18 9
No Yes Methylophaga sp. JAM1   18 9
No Yes Cycloclasticus sp. P1   14 7
No Yes Thiomicrospira crunogena XCL-2   22 11
No Yes Thioalkalimicrobium cyclicum ALM1   10 5
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   2 1
No Yes Francisella sp. TX077308   2 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   2 1
No Yes Francisella tularensis subsp. tularensis WY96-3418   2 1
No Yes Francisella cf. novicida 3523   2 1
No Yes Francisella novicida U112   2 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 14 10
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Batrachochytrium dendrobatidis JAM81   2 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   22 11
No Yes Chamaesiphon minutus PCC 6605   14 7
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   8 4
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   8 4
No Yes Synechocystis sp. PCC 6803 substr. GT-I   8 4
No Yes Synechocystis sp. PCC 6803   10 5
No Yes Cyanobium gracile PCC 6307   10 5
No Yes Dactylococcopsis salina PCC 8305   4 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   2 1
No Yes Synechococcus sp. JA-3-3Ab   2 1
No Yes Synechococcus sp. CC9902   4 2
No Yes Synechococcus sp. RCC307   8 4
No Yes Synechococcus sp. CC9605   4 2
No Yes Synechococcus sp. WH 8102   4 2
No Yes Synechococcus sp. WH 7803   6 3
No Yes Synechococcus sp. PCC 7002   6 3
No Yes Synechococcus elongatus PCC 6301   4 2
No Yes Prochlorococcus marinus str. MIT 9313   4 2
No Yes Prochlorococcus marinus str. MIT 9303   4 2
No Yes Crinalium epipsammum PCC 9333   4 2
No Yes Oscillatoria nigro-viridis PCC 7112   18 9
No Yes Oscillatoria acuminata PCC 6304   11 6
No Yes Arthrospira platensis NIES-39   7 4
No Yes Cyanothece sp. PCC 7822   8 4
No Yes Cyanothece sp. PCC 7425   10 5
No Yes Cyanothece sp. PCC 7424   8 4
No Yes Cyanothece sp. ATCC 51142   13 7
No Yes Cyanothece sp. PCC 8801   10 5
No Yes Cyanobacterium aponinum PCC 10605   10 5
No Yes Cyanobacterium stanieri PCC 7202   4 2
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   32 16
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   10 5
No Yes Stanieria cyanosphaera PCC 7437   12 6
No Yes Calothrix parietina Calothrix sp. PCC 6303   6 3
No Yes Cylindrospermum stagnale PCC 7417   10 5
No Yes Anabaena cylindrica PCC 7122   9 5
No Yes Nocardiopsis alba ATCC BAA-2165   2 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   3 2
No Yes Amycolatopsis mediterranei RB   2 1
No Yes Amycolatopsis mediterranei S699   2 1
No Yes Amycolatopsis mediterranei S699   2 1
No Yes Amycolatopsis orientalis HCCB10007   2 1
No Yes Actinoplanes friuliensis DSM 7358   2 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   2 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   2 1
No Yes Chthonomonas calidirosea T49   12 6
No Yes Thermus oshimai JL-2   4 2
No Yes Thermus thermophilus JL-18   2 1
No Yes Thermus thermophilus SG0.5JP17-16   2 1
No Yes Thermus thermophilus HB8   2 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 1
No Yes Clostridium acidurici 9a   4 2
No Yes Desulfosporosinus meridiei DSM 13257   12 6
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   6 3
No Yes Desulfitobacterium hafniense DCB-2   4 2
No Yes Desulfotomaculum gibsoniae DSM 7213   4 2
No Yes Clostridium difficile BI1   2 1
No Yes Clostridium difficile R20291   2 1
No Yes Clostridium difficile CD196   2 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   4 2
No Yes Roseburia intestinalis XB6B4   2 1
No Yes Clostridium saccharobutylicum DSM 13864   6 3
No Yes Clostridium autoethanogenum DSM 10061   6 4
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   8 4
No Yes Clostridium kluyveri NBRC 12016   4 2
No Yes Clostridium botulinum BKT015925   2 1
No Yes Clostridium botulinum E3 str. Alaska E43   2 1
No Yes Clostridium acetobutylicum DSM 1731   2 1
No Yes Clostridium acetobutylicum EA 2018   2 1
No Yes Thermacetogenium phaeum DSM 12270   2 1
No Yes Halobacteroides halobius DSM 5150   4 2
No Yes Exiguobacterium antarcticum B7   4 2
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   2 1
No Yes Thermobacillus composti KWC4   2 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   8 4
No Yes Paenibacillus mucilaginosus K02   6 3
No Yes Paenibacillus polymyxa CR1   8 4
No Yes Paenibacillus polymyxa SC2   6 3
No Yes Paenibacillus polymyxa E681   4 2
No Yes Geobacillus sp. C56-T3   2 1
No Yes Geobacillus sp. Y4.1MC1   4 2
No Yes Geobacillus sp. Y412MC52   2 1
No Yes Geobacillus sp. Y412MC61   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   3 2
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   2 1
No Yes Bacillus amyloliquefaciens LFB112   2 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   2 1
No Yes Bacillus amyloliquefaciens IT-45   2 1
No Yes Bacillus amyloliquefaciens XH7   2 1
No Yes Bacillus amyloliquefaciens LL3   2 1
No Yes Bacillus amyloliquefaciens TA208   2 1
No Yes Bacillus amyloliquefaciens DSM 7   2 1
No Yes Bacillus licheniformis 9945A   2 1
No Yes Bacillus subtilis PY79   2 1
No Yes Bacillus subtilis XF-1   2 1
No Yes Bacillus subtilis QB928   2 1
No Yes Bacillus subtilis BSn5   2 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   2 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   2 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   2 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   2 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   2 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   2 1
No Yes Bacillus subtilis subsp. natto BEST195   2 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 1
No Yes Bacillus infantis NRRL B-14911   6 4
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   3 2
No Yes Bacillus toyonensis BCT-7112   3 2
No Yes Bacillus thuringiensis HD-771   3 2
No Yes Bacillus thuringiensis HD-789   3 2
No Yes Bacillus thuringiensis MC28   3 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   3 2
No Yes Bacillus thuringiensis YBT-1518   3 2
No Yes Bacillus thuringiensis Bt407   3 2
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 2
No Yes Bacillus thuringiensis BMB171   3 2
No Yes Bacillus thuringiensis serovar finitimus YBT-020   4 3
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   3 2
No Yes Bacillus cereus FRI-35   3 2
No Yes Bacillus cereus biovar anthracis str. CI   3 2
No Yes Bacillus cereus AH820   3 2
No Yes Bacillus cereus AH187   3 2
No Yes Bacillus cereus B4264   3 2
No Yes Bacillus cereus G9842   3 2
No Yes Bacillus cereus Q1   3 2
No Yes Bacillus cereus F837/76   3 2
No Yes Bacillus cereus NC7401   3 2
No Yes Bacillus cereus E33L   3 2
No Yes Bacillus cereus ATCC 14579   3 2
No Yes Bacillus cereus ATCC 10987   3 2
No Yes Bacillus anthracis str. H9401   3 2
No Yes Bacillus anthracis str. CDC 684   3 2
No Yes Bacillus anthracis str. 'Ames Ancestor'   3 2
No Yes Bacillus anthracis str. Sterne   3 2
No Yes Bacillus anthracis str. Ames   3 2
No Yes Bacillus megaterium WSH-002   4 2
No Yes Bacillus megaterium QM B1551   5 3
No Yes Bacillus coagulans 36D1   2 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   2 1
No Yes Staphylococcus pseudintermedius ED99   2 1
No Yes Staphylococcus pasteuri SP1   2 1
No Yes Staphylococcus lugdunensis N920143   2 1
No Yes Staphylococcus warneri SG1   2 1
No Yes Staphylococcus epidermidis ATCC 12228   2 1
No Yes Staphylococcus aureus CA-347   2 1
No Yes Staphylococcus aureus Bmb9393   2 1
No Yes Staphylococcus aureus M1   2 1
No Yes Staphylococcus aureus 08BA02176   2 1
No Yes Staphylococcus aureus ST228/18412   2 1
No Yes Staphylococcus aureus ST228/18341   2 1
No Yes Staphylococcus aureus ST228/16125   2 1
No Yes Staphylococcus aureus ST228/16035   2 1
No Yes Staphylococcus aureus ST228/15532   2 1
No Yes Staphylococcus aureus ST228/10497   2 1
No Yes Staphylococcus aureus ST228/10388   2 1
No Yes Staphylococcus aureus 04-02981   2 1
No Yes Staphylococcus aureus RF122   2 1
No Yes Staphylococcus aureus subsp. aureus Z172   2 1
No Yes Staphylococcus aureus subsp. aureus 6850   2 1
No Yes Staphylococcus aureus subsp. aureus SA957   2 1
No Yes Staphylococcus aureus subsp. aureus CN1   2 1
No Yes Staphylococcus aureus subsp. aureus SA40   2 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   2 1
No Yes Staphylococcus aureus subsp. aureus M013   2 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   2 1
No Yes Staphylococcus aureus subsp. aureus VC40   2 1
No Yes Staphylococcus aureus subsp. aureus T0131   2 1
No Yes Staphylococcus aureus subsp. aureus LGA251   2 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   2 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   2 1
No Yes Staphylococcus aureus subsp. aureus ED133   2 1
No Yes Staphylococcus aureus subsp. aureus TW20   2 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   2 1
No Yes Staphylococcus aureus subsp. aureus TCH60   2 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   2 1
No Yes Staphylococcus aureus subsp. aureus 71193   2 1
No Yes Staphylococcus aureus subsp. aureus S0385   2 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   2 1
No Yes Staphylococcus aureus subsp. aureus Mu3   2 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   2 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   2 1
No Yes Staphylococcus aureus subsp. aureus JH9   2 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   2 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   2 1
No Yes Staphylococcus aureus subsp. aureus MW2   2 1
No Yes Staphylococcus aureus subsp. aureus N315   2 1
No Yes Staphylococcus aureus subsp. aureus Mu50   2 1
No Yes Staphylococcus aureus subsp. aureus COL   2 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   2 1
No Yes Chlorobium phaeobacteroides BS1   10 5
No Yes Salinibacter ruber DSM 13855   16 8
No Yes Rhodothermus marinus SG0.5JP17-172   10 6
No Yes Echinicola vietnamensis DSM 17526   36 19
No Yes Emticicia oligotrophica DSM 17448   24 12
No Yes Prevotella sp. oral taxon 299 str. F0039   6 3
No Yes Prevotella dentalis DSM 3688   4 2
No Yes Porphyromonas gingivalis TDC60   6 4
No Yes Porphyromonas gingivalis W83   4 2
No Yes Alistipes shahii WAL 8301   11 6
No Yes Bacteroides xylanisolvens XB1A   24 12
No Yes Bacteroides fragilis 638R   29 16
No Yes Bacteroides fragilis NCTC 9343   31 17
No Yes Nonlabens dokdonensis DSW-6   8 4
No Yes Psychroflexus torquis ATCC 700755   16 8
No Yes Riemerella anatipestifer RA-CH-2   6 3
No Yes Riemerella anatipestifer RA-CH-1   6 3
No Yes Riemerella anatipestifer RA-GD   6 3
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   6 3
No Yes Fibrobacter succinogenes subsp. succinogenes S85   4 2
No Yes Singulisphaera acidiphila DSM 18658   53 27
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   9 5
No Yes Leptospira interrogans serovar Lai str. 56601   22 12
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   22 11
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   22 12
No Yes Brachyspira pilosicoli WesB   8 4
No Yes Brachyspira pilosicoli B2904   8 4
No Yes Brachyspira pilosicoli P43/6/78   8 4
No Yes Borrelia garinii NMJW1   2 1
No Yes Borrelia garinii BgVir   2 1
No Yes Borrelia afzelii HLJ01   2 1
No Yes Borrelia afzelii PKo   2 1
No Yes Borrelia burgdorferi CA382   2 1
No Yes Borrelia burgdorferi N40   2 1
No Yes Borrelia burgdorferi ZS7   2 1
No Yes Spirochaeta thermophila DSM 6578   2 1
No Yes Thermotoga maritima MSB8   2 1
No Yes Hydrogenobacter thermophilus TK-6   10 5
No Yes Leptospirillum ferriphilum ML-04   26 14
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   5 3
No Yes Fusobacterium nucleatum subsp. animalis 4_8   5 3
No Yes Acidithiobacillus ferrooxidans ATCC 23270   15 8
No Yes Bdellovibrio exovorus JSS   9 5
No Yes Bdellovibrio bacteriovorus str. Tiberius   14 7
No Yes Arcobacter butzleri 7h1h   10 5
No Yes Arcobacter butzleri ED-1   12 7
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   4 2
No Yes Campylobacter jejuni RM1221   4 2
No Yes Campylobacter jejuni subsp. jejuni 00-2544   4 2
No Yes Campylobacter jejuni subsp. jejuni 00-2538   4 2
No Yes Campylobacter jejuni subsp. jejuni 00-2426   4 2
No Yes Campylobacter jejuni subsp. jejuni 00-2425   4 2
No Yes Campylobacter jejuni subsp. jejuni PT14   4 2
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   2 2
No Yes Campylobacter jejuni subsp. jejuni S3   4 2
No Yes Campylobacter jejuni subsp. jejuni M1   4 2
No Yes Campylobacter jejuni subsp. jejuni IA3902   4 2
No Yes Campylobacter jejuni subsp. jejuni 81116   4 2
No Yes Campylobacter jejuni subsp. jejuni 81-176   4 2
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   4 2
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   4 2
No Yes Campylobacter coli 76339   4 2
No Yes Campylobacter coli 15-537360   4 2
No Yes Campylobacter coli CVM N29710   4 2
No Yes Helicobacter cetorum MIT 99-5656   6 3
No Yes Helicobacter pylori BM012S   6 3
No Yes Helicobacter pylori BM012A   6 3
No Yes Helicobacter pylori SouthAfrica20   6 3
No Yes Helicobacter pylori UM298   6 3
No Yes Helicobacter pylori UM066   6 3
No Yes Helicobacter pylori UM037   6 3
No Yes Helicobacter pylori UM299   6 3
No Yes Helicobacter pylori UM032   6 3
No Yes Helicobacter pylori OK310   6 3
No Yes Helicobacter pylori OK113   6 3
No Yes Helicobacter pylori Rif2   6 3
No Yes Helicobacter pylori Rif1   6 3
No Yes Helicobacter pylori HUP-B14   6 3
No Yes Helicobacter pylori PeCan18   6 3
No Yes Helicobacter pylori Shi169   6 3
No Yes Helicobacter pylori Shi112   6 3
No Yes Helicobacter pylori Shi417   6 3
No Yes Helicobacter pylori XZ274   2 1
No Yes Helicobacter pylori Aklavik86   6 3
No Yes Helicobacter pylori Aklavik117   6 3
No Yes Helicobacter pylori SNT49   6 3
No Yes Helicobacter pylori Puno135   6 3
No Yes Helicobacter pylori Puno120   6 3
No Yes Helicobacter pylori ELS37   6 3
No Yes Helicobacter pylori Gambia94/24   6 3
No Yes Helicobacter pylori SouthAfrica7   6 3
No Yes Helicobacter pylori India7   6 3
No Yes Helicobacter pylori Lithuania75   6 3
No Yes Helicobacter pylori 2017   6 3
No Yes Helicobacter pylori 2018   6 3
No Yes Helicobacter pylori 908   6 3
No Yes Helicobacter pylori F57   6 3
No Yes Helicobacter pylori F30   6 3
No Yes Helicobacter pylori F16   6 3
No Yes Helicobacter pylori Sat464   4 2
No Yes Helicobacter pylori Cuz20   6 3
No Yes Helicobacter pylori PeCan4   6 3
No Yes Helicobacter pylori SJM180   6 3
No Yes Helicobacter pylori B8   6 3
No Yes Helicobacter pylori 52   6 3
No Yes Helicobacter pylori v225d   6 3
No Yes Helicobacter pylori 83   6 3
No Yes Helicobacter pylori 35A   6 3
No Yes Helicobacter pylori P12   6 3
No Yes Helicobacter pylori G27   6 3
No Yes Helicobacter pylori Shi470   6 3
No Yes Helicobacter pylori HPAG1   6 3
No Yes Helicobacter pylori 51   6 3
No Yes Helicobacter pylori F32   6 3
No Yes Helicobacter pylori J99   6 3
No Yes Helicobacter pylori 26695   6 3
No Yes Helicobacter pylori 26695   6 3
No Yes Desulfocapsa sulfexigens DSM 10523   14 7
No Yes Desulfobacula toluolica Tol2   20 10
No Yes Lawsonia intracellularis N343   2 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   32 16
No Yes Desulfovibrio vulgaris RCH1   10 5
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   6 3
No Yes Desulfovibrio vulgaris str. Hildenborough   10 5
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   14 7
No Yes Desulfovibrio desulfuricans ND132   16 8
No Yes Geobacter sp. M18   14 7
No Yes Geobacter sulfurreducens PCA   18 9
No Yes Sorangium cellulosum So0157-2   22 11
No Yes Anaeromyxobacter sp. K   20 10
No Yes Anaeromyxobacter dehalogenans 2CP-C   22 11
No Yes Myxococcus stipitatus DSM 14675   32 16
No Yes Neisseria meningitidis WUE 2594   2 1
No Yes Neisseria meningitidis G2136   2 1
No Yes Neisseria meningitidis M04-240196   2 1
No Yes Neisseria meningitidis M01-240149   2 1
No Yes Neisseria meningitidis NZ-05/33   2 1
No Yes Neisseria meningitidis M01-240355   2 1
No Yes Neisseria meningitidis 8013   2 1
No Yes Neisseria meningitidis 053442   2 1
No Yes Neisseria meningitidis Z2491   2 1
No Yes Neisseria meningitidis H44/76   2 1
No Yes Neisseria meningitidis alpha710   2 1
No Yes Neisseria meningitidis MC58   2 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   2 1
No Yes Neisseria gonorrhoeae FA 1090   2 1
No Yes Burkholderia phenoliruptrix BR3459a   24 12
No Yes Pandoraea pnomenusa 3kgm   14 7
No Yes Ralstonia pickettii 12J   33 17
No Yes Ralstonia solanacearum FQY_4   27 14
No Yes Ralstonia solanacearum Po82   32 17
No Yes Ralstonia solanacearum PSI07   33 17
No Yes Ralstonia solanacearum CMR15   23 12
No Yes Ralstonia solanacearum GMI1000   29 15
No Yes Burkholderia sp. YI23   28 14
No Yes Burkholderia sp. CCGE1003   20 10
No Yes Burkholderia sp. CCGE1001   22 11
No Yes Burkholderia sp. KJ006   18 9
No Yes Burkholderia thailandensis MSMB121   21 11
No Yes Burkholderia pseudomallei MSHR305   20 10
No Yes Burkholderia pseudomallei NCTC 13179   20 10
No Yes Burkholderia pseudomallei BPC006   20 10
No Yes Burkholderia pseudomallei 1026b   20 10
No Yes Burkholderia pseudomallei MSHR346   14 7
No Yes Burkholderia pseudomallei 668   20 10
No Yes Burkholderia pseudomallei 1710b   20 10
No Yes Burkholderia pseudomallei K96243   20 10
No Yes Burkholderia mallei NCTC 10229   13 7
No Yes Burkholderia mallei NCTC 10247   13 7
No Yes Burkholderia mallei ATCC 23344   14 7
No Yes Burkholderia lata   25 13
No Yes Burkholderia ambifaria MC40-6   25 13
No Yes Burkholderia cenocepacia MC0-3   35 18
No Yes Burkholderia cenocepacia AU 1054   33 17
No Yes Burkholderia cenocepacia J2315   31 16
No Yes Burkholderia multivorans ATCC 17616   23 12
No Yes Burkholderia cepacia GG4   21 11
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   8 4
No Yes Alicycliphilus denitrificans BC   24 12
No Yes Variovorax paradoxus B4   28 14
No Yes Variovorax paradoxus EPS   26 13
No Yes Taylorella asinigenitalis 14/45   4 2
No Yes Taylorella equigenitalis 14/56   6 3
No Yes Taylorella equigenitalis ATCC 35865   6 3
No Yes Bordetella pertussis CS   10 5
No Yes Bordetella parapertussis 18323   8 4
No Yes Bordetella parapertussis Bpp5   10 5
No Yes Bordetella bronchiseptica MO149   14 7
No Yes Bordetella bronchiseptica 253   14 7
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   26 13
No Yes Nitrosomonas sp. AL212   20 10
No Yes Sulfuricella denitrificans skB26   20 11
No Yes Caulobacter crescentus CB15   14 7
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   8 4
No Yes Zymomonas mobilis subsp. mobilis CP4   10 5
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   8 4
No Yes Zymomonas mobilis subsp. mobilis ZM4   8 4
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   10 6
No Yes Phaeobacter gallaeciensis DSM 17395   4 3
No Yes Phaeobacter gallaeciensis DSM 26640   4 3
No Yes Leisingera methylohalidivorans DSM 14336   8 6
No Yes Octadecabacter antarcticus 307   13 7
No Yes Octadecabacter arcticus 238   8 4
No Yes Rhodobacter sphaeroides KD131   9 5
No Yes Rhodobacter sphaeroides ATCC 17025   11 6
No Yes Rhodobacter sphaeroides 2.4.1   9 5
No Yes Paracoccus aminophilus JCM 7686   14 7
No Yes Candidatus Endolissoclinum faulkneri L2   2 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   10 5
No Yes Rhodospirillum rubrum ATCC 11170   12 6
No Yes Gluconacetobacter diazotrophicus PAl 5   21 12
No Yes Gluconobacter oxydans H24   20 11
No Yes Acetobacter pasteurianus 386B   10 6
No Yes Acetobacter pasteurianus IFO 3283-12   14 8
No Yes Acetobacter pasteurianus IFO 3283-01-42C   14 8
No Yes Acetobacter pasteurianus IFO 3283-32   14 8
No Yes Acetobacter pasteurianus IFO 3283-26   14 8
No Yes Acetobacter pasteurianus IFO 3283-22   14 8
No Yes Acetobacter pasteurianus IFO 3283-07   14 8
No Yes Acetobacter pasteurianus IFO 3283-03   14 8
No Yes Micavibrio aeruginosavorus EPB   8 4
No Yes Candidatus Pelagibacter ubique HTCC1062   2 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   1 1
No Yes Ehrlichia muris AS145   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   2 1
No Yes Ehrlichia ruminantium str. Welgevonden   2 1
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Anaplasma marginale str. Dawn   1 1
No Yes Anaplasma marginale str. Gypsy Plains   1 1
No Yes Anaplasma marginale str. St. Maries   1 1
No Yes Rickettsia bellii RML369-C   4 2
No Yes Rickettsia canadensis str. CA410   2 1
No Yes Rickettsia typhi str. B9991CWPP   2 1
No Yes Rickettsia typhi str. TH1527   2 1
No Yes Rickettsia prowazekii str. Breinl   2 2
No Yes Rickettsia prowazekii str. NMRC Madrid E   2 2
No Yes Rickettsia prowazekii str. RpGvF24   2 1
No Yes Rickettsia prowazekii str. GvV257   2 1
No Yes Rickettsia prowazekii str. Dachau   2 1
No Yes Rickettsia prowazekii str. Katsinyian   2 1
No Yes Rickettsia prowazekii str. Chernikova   2 1
No Yes Rickettsia prowazekii Rp22   2 1
No Yes Rickettsia prowazekii str. Madrid E   2 1
No Yes Rickettsia slovaca str. D-CWPP   4 3
No Yes Rickettsia massiliae str. AZT80   2 1
No Yes Rickettsia rickettsii str. Arizona   4 3
No Yes Rickettsia rickettsii str. Brazil   4 3
No Yes Rickettsia rickettsii str. Hauke   4 3
No Yes Rickettsia rickettsii str. Colombia   4 3
No Yes Rickettsia rickettsii str. Hlp#2   4 3
No Yes Rickettsia rickettsii str. Hino   4 3
No Yes Rickettsia rickettsii str. Iowa   4 3
No Yes Methylobacterium extorquens DM4   52 26
No Yes Methylobacterium extorquens PA1   31 16
No Yes Brucella ceti TE10759-12   10 5
No Yes Brucella ceti TE28753-12   3 2
No Yes Brucella canis HSK A52141   12 7
No Yes Brucella suis VBI22   10 5
No Yes Brucella suis 1330   10 5
No Yes Brucella suis 1330   10 5
No Yes Brucella melitensis NI   12 6
No Yes Brucella melitensis M5-90   12 6
No Yes Brucella melitensis M28   12 6
No Yes Brucella melitensis bv. 1 str. 16M   12 7
No Yes Brucella abortus A13334   12 8
No Yes Brucella melitensis biovar Abortus 2308   8 4
No Yes Brucella abortus bv. 1 str. 9-941   8 4
No Yes Sinorhizobium fredii USDA 257   18 9
No Yes Sinorhizobium fredii HH103   24 12
No Yes Sinorhizobium meliloti 2011   14 7
No Yes Sinorhizobium meliloti GR4   24 12
No Yes Sinorhizobium meliloti Rm41   18 9
No Yes Sinorhizobium meliloti SM11   20 10
No Yes Sinorhizobium meliloti BL225C   18 9
No Yes Sinorhizobium meliloti 1021   20 10
No Yes Rhizobium etli CFN 42   22 11
No Yes Rhizobium etli bv. mimosae str. Mim1   24 12
No Yes Rhizobium tropici CIAT 899   32 16
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   20 10
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   22 11
No Yes Liberibacter crescens BT-1   4 2
No Yes Mesorhizobium australicum WSM2073   18 9
No Yes Hyphomicrobium nitrativorans NL23   22 11
No Yes Hyphomicrobium denitrificans 1NES1   30 15
No Yes Oligotropha carboxidovorans OM5   36 18
No Yes Oligotropha carboxidovorans OM5   36 18
No Yes Rhodopseudomonas palustris DX-1   40 20
No Yes Rhodopseudomonas palustris TIE-1   44 22
No Yes Rhodopseudomonas palustris HaA2   32 16
No Yes Rhodopseudomonas palustris BisB5   38 19
No Yes Rhodopseudomonas palustris BisB18   36 18
No Yes Rhodopseudomonas palustris CGA009   42 21
No Yes Bradyrhizobium sp. S23321   40 20
No Yes Bradyrhizobium sp. BTAi1   54 28
No Yes Bradyrhizobium oligotrophicum S58   34 17
No Yes Bradyrhizobium japonicum USDA 6   43 22
No Yes Bartonella australis Aust/NH1   2 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   2 1
No Yes Bartonella quintana RM-11   2 1
No Yes Simiduia agarivorans SA1 = DSM 21679   26 13
No Yes Mannheimia succiniciproducens MBEL55E   4 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   2 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   2 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   2 1
No Yes Haemophilus somnus 2336   2 1
No Yes Mannheimia haemolytica USMARC_2286   2 1
No Yes Mannheimia haemolytica M42548   2 1
No Yes Mannheimia haemolytica D174   2 1
No Yes Mannheimia haemolytica D171   2 1
No Yes Mannheimia haemolytica D153   2 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   2 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   2 1
No Yes Pasteurella multocida 36950   2 1
No Yes Pasteurella multocida subsp. multocida str. HN06   2 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   2 1
No Yes Haemophilus parasuis ZJ0906   2 1
No Yes Haemophilus influenzae KR494   2 1
No Yes Haemophilus influenzae F3047   2 1
No Yes Haemophilus influenzae F3031   2 1
No Yes Haemophilus influenzae 10810   2 1
No Yes Haemophilus influenzae PittGG   2 1
No Yes Haemophilus influenzae 86-028NP   2 1
No Yes Haemophilus influenzae R2866   2 1
No Yes Haemophilus influenzae R2846   2 1
No Yes Haemophilus influenzae Rd KW20   2 1
No Yes Actinobacillus suis H91-0380   2 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   2 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   14 7
No Yes Vibrio fischeri ES114   20 10
No Yes Vibrio sp. EJY3   21 11
No Yes Vibrio parahaemolyticus BB22OP   24 12
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   24 13
No Yes Vibrio anguillarum Listonella anguillarum M3   10 5
No Yes Vibrio nigripulchritudo VibrioScope   20 10
No Yes Vibrio vulnificus CMCP6   22 11
No Yes Vibrio vulnificus YJ016   22 11
No Yes Vibrio cholerae LMA3984-4   8 4
No Yes Vibrio cholerae M66-2   12 6
No Yes Vibrio cholerae O395   12 6
No Yes Vibrio cholerae IEC224   12 6
No Yes Vibrio cholerae O1 str. 2010EL-1786   12 6
No Yes Vibrio cholerae MJ-1236   12 6
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   12 6
No Yes Idiomarina loihiensis GSL 199   24 12
No Yes Shewanella sp. W3-18-1   34 17
No Yes Shewanella sp. ANA-3   42 21
No Yes Shewanella baltica BA175   28 14
No Yes Shewanella baltica OS678   30 15
No Yes Shewanella baltica OS117   30 15
No Yes Shewanella baltica OS223   28 14
No Yes Shewanella baltica OS195   30 15
No Yes Shewanella baltica OS155   28 14
No Yes Shewanella sp. MR-7   30 15
No Yes Shewanella putrefaciens 200   36 18
No Yes Glaciecola psychrophila 170   33 20
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   30 15
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   37 19
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   36 18
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   34 17
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   38 19
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   39 20
No Yes Alteromonas macleodii str. 'English Channel 615'   23 12
No Yes Alteromonas macleodii AltDE1   36 18
No Yes Alteromonas macleodii str. 'English Channel 673'   30 15
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   34 17
No Yes Alteromonas macleodii str. 'Black Sea 11'   34 17
No Yes Alteromonas macleodii ATCC 27126   24 12
No Yes Alcanivorax dieselolei B5   26 13
No Yes Thalassolituus oleivorans MIL-1   26 13
No Yes Stenotrophomonas maltophilia D457   38 19
No Yes Stenotrophomonas maltophilia JV3   32 16
No Yes Stenotrophomonas maltophilia R551-3   34 17
No Yes Xylella fastidiosa subsp. fastidiosa GB514   8 4
No Yes Xylella fastidiosa M12   9 5
No Yes Xylella fastidiosa Temecula1   8 4
No Yes Xylella fastidiosa 9a5c   10 5
No Yes Xanthomonas citri subsp. citri Aw12879   26 13
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   28 14
No Yes Xanthomonas axonopodis pv. citrumelo F1   28 14
No Yes Xanthomonas axonopodis Xac29-1   26 13
No Yes Xanthomonas oryzae pv. oryzicola BLS256   18 9
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   18 9
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   16 8
No Yes Xanthomonas campestris pv. raphani 756C   20 10
No Yes Xanthomonas campestris pv. campestris str. 8004   20 10
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   20 10
No Yes Spiribacter salinus M19-40   6 3
No Yes Thioalkalivibrio nitratireducens DSM 14787   14 7
No Yes Thioflavicoccus mobilis 8321   22 11
No Yes Coxiella burnetii CbuK_Q154   6 3
No Yes Coxiella burnetii CbuG_Q212   6 3
No Yes Coxiella burnetii RSA 331   6 3
No Yes Coxiella burnetii RSA 493   6 3
No Yes Legionella pneumophila str. Paris   18 9
No Yes Legionella pneumophila str. Lens   10 5
No Yes Legionella pneumophila subsp. pneumophila LPE509   22 11
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   18 9
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   16 8
No Yes Legionella pneumophila subsp. pneumophila   22 11
No Yes Legionella pneumophila subsp. pneumophila   12 6
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   12 6
No Yes Legionella pneumophila 2300/99 Alcoy   18 9
No Yes Proteus mirabilis BB2000   10 5
No Yes Morganella morganii subsp. morganii KT   8 4
No Yes Edwardsiella tarda C07-087   10 5
No Yes Edwardsiella tarda FL6-60   10 5
No Yes Rahnella aquatilis HX2   24 12
No Yes Yersinia pseudotuberculosis PB1/+   14 7
No Yes Yersinia pseudotuberculosis YPIII   14 7
No Yes Yersinia pseudotuberculosis IP 32953   14 7
No Yes Yersinia pestis biovar Microtus str. 91001   14 7
No Yes Yersinia pestis A1122   14 7
No Yes Yersinia pestis Z176003   14 7
No Yes Yersinia pestis D182038   14 7
No Yes Yersinia pestis D106004   14 7
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   9 5
No Yes Yersinia pestis Nepal516   14 7
No Yes Yersinia pestis Antiqua   14 7
No Yes Yersinia pestis Angola   12 6
No Yes Yersinia pestis CO92   14 7
No Yes Yersinia pestis KIM10+   14 7
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   12 6
No Yes Yersinia enterocolitica subsp. palearctica Y11   12 6
No Yes Serratia sp. AS13   16 8
No Yes Serratia plymuthica S13   18 9
No Yes Serratia plymuthica 4Rx13   16 8
No Yes Serratia marcescens FGI94   12 6
No Yes Serratia marcescens WW4   16 8
No Yes Serratia liquefaciens ATCC 27592   18 9
No Yes Dickeya dadantii Ech586   18 9
No Yes Dickeya dadantii 3937   18 9
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   16 8
No Yes Pantoea ananatis LMG 5342   20 10
No Yes Pantoea ananatis PA13   20 10
No Yes Pantoea ananatis AJ13355   20 10
No Yes Erwinia pyrifoliae DSM 12163   12 6
No Yes Erwinia amylovora CFBP1430   12 6
No Yes Cronobacter sakazakii CMCC 45402   12 6
No Yes Cronobacter sakazakii SP291   14 7
No Yes Cronobacter sakazakii ATCC BAA-894   12 6
No Yes Raoultella ornithinolytica B6   22 11
No Yes Shigella sonnei 53G   14 7
No Yes Shigella flexneri 2002017   8 4
No Yes Shigella flexneri 2a str. 2457T   8 4
No Yes Shigella flexneri 2a str. 301   8 4
No Yes Shigella dysenteriae 1617   10 8
No Yes Shigella boydii Sb227   12 6
No Yes Salmonella bongori N268-08   14 7
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   10 5
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   12 6
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   9 5
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   12 6
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   14 7
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   12 6
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   10 5
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   12 6
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   12 6
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   12 6
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   12 6
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   8 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   8 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   8 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   8 4
No Yes Salmonella enterica serovar Bovismorbificans genomics   12 6
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   12 6
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   12 6
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   12 6
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   11 6
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   12 6
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   10 5
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   10 5
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   14 7
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   10 5
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   12 6
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   12 6
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   10 5
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   10 5
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   10 5
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   12 6
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   8 4
No Yes Klebsiella oxytoca KCTC 1686   28 14
No Yes Klebsiella pneumoniae JM45   24 12
No Yes Klebsiella pneumoniae CG43   22 11
No Yes Klebsiella pneumoniae KCTC 2242   26 13
No Yes Klebsiella pneumoniae 342   26 13
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   22 11
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   20 10
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   24 12
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   23 12
No Yes Enterobacter aerogenes EA1509E   16 8
No Yes Escherichia coli E24377A   14 7
No Yes Escherichia coli E. coli PMV-1   16 8
No Yes Escherichia coli JJ1886   16 8
No Yes Escherichia coli LY180   14 7
No Yes Escherichia coli APEC O78   14 7
No Yes Escherichia coli O7:K1 str. CE10   14 7
No Yes Escherichia coli O104:H4 str. 2009EL-2050   16 8
No Yes Escherichia coli O104:H4 str. 2009EL-2071   16 8
No Yes Escherichia coli O104:H4 str. 2011C-3493   16 8
No Yes Escherichia coli NA114   16 8
No Yes Escherichia coli P12b   14 7
No Yes Escherichia coli str. 'clone D i2'   14 7
No Yes Escherichia coli str. 'clone D i14'   14 7
No Yes Escherichia coli UM146   16 8
No Yes Escherichia coli 042   14 7
No Yes Escherichia coli Xuzhou21   16 9
No Yes Escherichia coli IHE3034   16 8
No Yes Escherichia coli UMNK88   14 8
No Yes Escherichia coli O83:H1 str. NRG 857C   16 8
No Yes Escherichia coli ABU 83972   16 8
No Yes Escherichia coli KO11FL   14 7
No Yes Escherichia coli KO11FL   14 7
No Yes Escherichia coli LF82   16 8
No Yes Escherichia coli ED1a   17 9
No Yes Escherichia coli IAI39   12 6
No Yes Escherichia coli UMN026   14 7
No Yes Escherichia coli 55989   16 8
No Yes Escherichia coli S88   17 9
No Yes Escherichia coli IAI1   14 7
No Yes Escherichia coli W   14 7
No Yes Escherichia coli W   14 7
No Yes Escherichia coli DH1   14 7
No Yes Escherichia coli DH1   14 7
No Yes Escherichia coli ATCC 8739   16 8
No Yes Escherichia coli BL21(DE3)   14 7
No Yes Escherichia coli BL21(DE3)   14 7
No Yes Escherichia coli SMS-3-5   14 7
No Yes Escherichia coli SE15   16 8
No Yes Escherichia coli SE11   14 7
No Yes Escherichia coli APEC O1   19 10
No Yes Escherichia coli O103:H2 str. 12009   14 7
No Yes Escherichia coli UTI89   16 8
No Yes Escherichia coli 536   16 8
No Yes Escherichia coli HS   14 7
No Yes Escherichia coli ETEC H10407   16 8
No Yes Escherichia coli O55:H7 str. RM12579   16 8
No Yes Escherichia coli O55:H7 str. CB9615   16 8
No Yes Escherichia coli O26:H11 str. 11368   14 7
No Yes Escherichia coli CFT073   17 9
No Yes Escherichia coli O111:H- str. 11128   14 7
No Yes Escherichia coli O127:H6 str. E2348/69   16 8
No Yes Escherichia coli O157:H7 str. TW14359   14 7
No Yes Escherichia coli O157:H7 str. EC4115   12 6
No Yes Escherichia coli O157:H7 str. Sakai   14 7
No Yes Escherichia coli O157:H7 str. EDL933   16 9
No Yes Escherichia coli str. K-12 substr. MDS42   14 7
No Yes Escherichia coli BW2952   14 7
No Yes Escherichia coli str. K-12 substr. MG1655   14 7
No Yes Escherichia coli str. K-12 substr. W3110   14 7
No Yes Escherichia coli str. K-12 substr. DH10B   16 8
No Yes Escherichia coli B str. REL606   14 7
No Yes Enterobacter cloacae SCF1   16 8
No Yes Enterobacter cloacae EcWSU1   22 11
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   22 11
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   11 7
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   26 13
No Yes Azotobacter vinelandii CA6   20 10
No Yes Azotobacter vinelandii CA   20 10
No Yes Pseudomonas denitrificans ATCC 13867   22 11
No Yes Pseudomonas syringae pv. phaseolicola 1448A   22 11
No Yes Pseudomonas syringae pv. syringae B728a   24 12
No Yes Pseudomonas stutzeri CCUG 29243   20 10
No Yes Pseudomonas stutzeri DSM 10701   16 8
No Yes Pseudomonas stutzeri DSM 4166   24 12
No Yes Pseudomonas stutzeri RCH2   20 10
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   20 10
No Yes Pseudomonas monteilii SB3101   28 14
No Yes Pseudomonas monteilii SB3078   26 13
No Yes Pseudomonas putida H8234   28 14
No Yes Pseudomonas putida HB3267   30 15
No Yes Pseudomonas putida NBRC 14164   24 12
No Yes Pseudomonas putida DOT-T1E   28 14
No Yes Pseudomonas putida S16   26 13
No Yes Pseudomonas putida BIRD-1   20 10
No Yes Pseudomonas putida W619   22 11
No Yes Pseudomonas putida ND6   24 12
No Yes Pseudomonas putida KT2440   26 13
No Yes Pseudomonas putida GB-1   30 15
No Yes Pseudomonas protegens CHA0   24 12
No Yes Pseudomonas poae RE*1-1-14   22 11
No Yes Pseudomonas fluorescens F113   22 11
No Yes Pseudomonas fluorescens A506   24 12
No Yes Pseudomonas fluorescens R124   28 14
No Yes Pseudomonas fluorescens Pf0-1   28 14
No Yes Pseudomonas resinovorans NBRC 106553   26 13
No Yes Pseudomonas mendocina NK-01   22 11
No Yes Pseudomonas aeruginosa SCV20265   30 15
No Yes Pseudomonas aeruginosa MTB-1   28 14
No Yes Pseudomonas aeruginosa LES431   26 13
No Yes Pseudomonas aeruginosa RP73   26 13
No Yes Pseudomonas aeruginosa B136-33   28 14
No Yes Pseudomonas aeruginosa PA1R   22 11
No Yes Pseudomonas aeruginosa PA1   24 12
No Yes Pseudomonas aeruginosa DK2   28 14
No Yes Pseudomonas aeruginosa NCGM2.S1   30 15
No Yes Pseudomonas aeruginosa M18   26 13
No Yes Pseudomonas aeruginosa LESB58   28 14
No Yes Pseudomonas aeruginosa PA7   28 14
No Yes Pseudomonas aeruginosa PAO1   26 13
No Yes Acinetobacter genomosp. 13TU RUH2624   22 11
No Yes Acinetobacter sp. SH024   18 9
No Yes Acinetobacter calcoaceticus ruh2202   18 9
No Yes Acinetobacter baumannii ZW85-1   14 7
No Yes Acinetobacter baumannii TYTH-1   14 7
No Yes Acinetobacter baumannii BJAB0868   14 7
No Yes Acinetobacter baumannii BJAB0715   14 7
No Yes Acinetobacter baumannii BJAB07104   14 7
No Yes Acinetobacter baumannii TCDC-AB0715   14 7
No Yes Acinetobacter baumannii D1279779   14 7
No Yes Acinetobacter baumannii MDR-TJ   12 6
No Yes Acinetobacter baumannii 1656-2   14 7
No Yes Acinetobacter baumannii ATCC 19606   14 7
No Yes Acinetobacter baumannii AB307-0294   14 7
No Yes Acinetobacter baumannii AYE   14 7
No Yes Acinetobacter baumannii SDF   10 5
No Yes Acinetobacter baumannii MDR-ZJ06   14 7
No Yes Acinetobacter baumannii AB0057   14 7
No Yes Acinetobacter baumannii ACICU   14 7
No Yes Acinetobacter radioresistens SH164   12 6
No Yes Acinetobacter junii SH205   13 7
No Yes Acinetobacter johnsonii SH046   15 8
No Yes Acinetobacter lwoffii SH145   11 6
No Yes Methylophaga sp. JAM7   14 7
No Yes Cycloclasticus zancles 7-ME   18 9
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A   2 1
No Yes Francisella tularensis subsp. mediasiatica FSC147   2 1
No Yes Francisella tularensis subsp. holarctica F92   2 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00   2 1
No Yes Francisella tularensis subsp. holarctica OSU18   2 1
No Yes Francisella tularensis subsp. holarctica LVS   2 1
No Yes Francisella tularensis subsp. holarctica FSC200   2 1
No Yes Francisella tularensis subsp. tularensis TIGB03   2 1
No Yes Francisella tularensis subsp. tularensis TI0902   2 1
No Yes Francisella tularensis subsp. tularensis NE061598   2 1
No Yes Francisella tularensis subsp. tularensis FSC198   2 1
No Yes Francisella tularensis subsp. tularensis SCHU S4   2 1
No Yes Francisella cf. novicida Fx1   2 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Ricinus communis (Early assembly) Castor bean 8 8
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   18 9
No Yes 1_050719N (meta-genome)   75 56
No Yes 1_Upper_euphotic (meta-genome)   3 3
No Yes 2_050719S (meta-genome)   53 48
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   30 29
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   55 50
No Yes 4_Deep_abyss (meta-genome)   7 7
No Yes 5_050719P (meta-genome)   50 45
No Yes 5_Below_upper_mesopelagic (meta-genome)   8 8
No Yes 6_Upper_euphotic (meta-genome)   8 8
No Yes 7_Oxygen_minimum_layer (meta-genome)   10 10
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   28 28
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   21 21
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   86 82
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   82 76
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   131 108
No Yes Bath Hot Springs, filamentous community (meta-genome)   10 8
No Yes Bath Hot Springs, planktonic community (meta-genome)   36 33
No Yes Combined (meta-genome)   401 353
No Yes Crater Hills (meta-genome)   2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   313 281
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   106 97
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   117 98
No Yes Dump bottom (Dump bottom) (meta-genome)   597 594
No Yes Dump top (Dump top) (meta-genome)   469 460
No Yes Endophytic microbiome from Rice (meta-genome)   47 47
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   97 95
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   84 84
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   77 76
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   99 94
No Yes Fungus garden combined (combined) (meta-genome)   189 169
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   338 324
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   367 347
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   29 28
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   13 13
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   12 12
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   12 12
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   13 13
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   10 10
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   12 12
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   7 7
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   90 87
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   8 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   27 25
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   16 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   33 28
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   20 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   30 30
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   34 34
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   49 49
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   40 40
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   14 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   26 23
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   15 12
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   5 4
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   25 21
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   102 102
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   83 83
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   63 56
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   583 554
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   119 119
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   53 51
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   127 126
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   103 102
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   194 173
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   121 121
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   58 58
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   119 85
No Yes Mouse Gut Community lean1 (meta-genome)   4 4
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes Mouse Gut Community lean3 (meta-genome)   2 2
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   789958 400831
No Yes Nymph Lake Bulk Water (meta-genome)   2 2
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   223 223
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   24 14
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   6 5
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome)   4 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   8 4
No Yes Protozoadb 2010_08 (Protozoadb)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   241 241
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   219 205
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   279 262
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   89 75
No Yes Sludge/US, Jazz Assembly (meta-genome)   69 48
No Yes Sludge/US, Phrap Assembly (meta-genome)   125 104
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   178 177
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   434 434
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   214 214
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   111 111
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   111 111
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   432 432
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   425 425
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   50 46
No Yes STRING v9.0.5 (STRING)   8908 4568
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   29 29
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   308 308
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   68 68
No Yes Termite Protist Endosymbiont Community (meta-genome)   21 21
No Yes Uniprot 2018_03 genome   197488 104320
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   62 49
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   70 66
No Yes Global Ocean Sampling Expedition (GOS)   5470 5191
No Yes NCBI plasmid sequences (Plasmids)   950 490
No Yes PDB chains (SCOP 1.75) (PDB)   4 2
No Yes Protein Data Bank (all PDB sequenc)   426 214
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   653 653
No Yes TargetDB (Targets)   55 37
No Yes The Salmonella enterica Pan-genome (meta-genome)   344 172

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