SUPERFAMILY 1.75 HMM library and genome assignments server

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PFOR PP module family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   44326 44326
No Yes Capitella sp. I   2 2
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   1 1
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   4 4
No Yes Entamoeba histolytica 1   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   21 21
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   2 1
No Yes Symbiodinium minutum clade B1 v1.2   5 5
No Yes Trichomonas vaginalis   6 6
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   2 2
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   2 2
No Yes Cryptobacterium curtum DSM 15641   1 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Olsenella uli DSM 7084   1 1
No Yes Atopobium parvulum DSM 20469   1 1
No Yes Coriobacterium glomerans PW2   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Propionibacterium acnes SK137   1 1
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   2 2
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Roseiflexus sp. RS-1   1 1
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   1 1
No Yes Anaerococcus prevotii DSM 20548   2 2
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Veillonella parvula DSM 2008   1 1
No Yes Megasphaera elsdenii DSM 20460   3 3
No Yes Acidaminococcus intestini RyC-MR95   4 4
No Yes Acidaminococcus fermentans DSM 20731   1 1
No Yes Megamonas hypermegale   1 1
No Yes Selenomonas sputigena ATCC 35185   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   2 2
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   1 1
No Yes Clostridium clariflavum DSM 19732   3 3
No Yes Eubacterium siraeum   1 1
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ethanoligenens harbinense YUAN-3   1 1
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus albus 7   1 1
No Yes Oscillibacter valericigenes Sjm18-20   5 5
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   2 2
No Yes Desulfosporosinus orientis DSM 765   2 2
No Yes Dehalobacter sp. DCA   2 2
No Yes Dehalobacter sp. CF   2 2
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   2 2
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium difficile 630   1 1
No Yes Clostridium sticklandii DSM 519   1 1
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Clostridium lentocellum DSM 5427   3 3
No Yes [Ruminococcus] obeum   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Roseburia intestinalis   1 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   2 2
No Yes Alkaliphilus metalliredigens QYMF   2 2
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   2 2
No Yes Clostridium kluyveri DSM 555   2 2
No Yes Clostridium beijerinckii NCIMB 8052   3 3
No Yes Clostridium tetani E88   2 2
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   2 2
No Yes Clostridium botulinum A str. ATCC 3502   2 2
No Yes Clostridium acetobutylicum ATCC 824   2 2
No Yes Thermoanaerobacterium xylanolyticum LX-11   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 2
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   2 2
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   2 2
No Yes Thermoanaerobacter sp. X514   2 2
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   2 2
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   2 2
No Yes Halothermothrix orenii H 168   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   2 2
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   2 2
No Yes Lactococcus garvieae ATCC 49156   1 1
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Porphyromonas gingivalis ATCC 33277   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Bacteroides salanitronis DSM 18170   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Maribacter sp. HTCC2170   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Methylacidiphilum infernorum V4   1 1
No Yes Coraliomargarita akajimensis DSM 45221   2 2
No Yes Opitutus terrae PB90-1   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Fretibacterium fastidiosum   1 1
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Thermanaerovibrio acidaminovorans DSM 6589   1 1
No Yes Anaerobaculum mobile DSM 13181   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Sphaerochaeta coccoides DSM 17374   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Treponema azotonutricium ZAS-9   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Treponema paraluiscuniculi Cuniculi A   1 1
No Yes Treponema pallidum subsp. pallidum SS14   2 2
No Yes Treponema denticola ATCC 35405   2 2
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Spirochaeta thermophila DSM 6192   1 1
No Yes Calditerrivibrio nitroreducens DSM 19672   1 1
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Streptobacillus moniliformis DSM 12112   1 1
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Leptotrichia buccalis C-1013-b   1 1
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   2 2
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Sulfurospirillum deleyianum DSM 6946   1 1
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Campylobacter hominis ATCC BAA-381   1 1
No Yes Campylobacter lari RM2100   1 1
No Yes Campylobacter curvus 525.92   1 1
No Yes Campylobacter concisus 13826   1 1
No Yes Campylobacter jejuni subsp. doylei 269.97   1 1
No Yes Campylobacter sp. 03-427   1 1
No Yes Campylobacter fetus subsp. fetus 82-40   1 1
No Yes uncultured Sulfuricurvum sp. RIFRC-1   1 1
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Syntrophus aciditrophicus SB   1 1
No Yes Desulfurivibrio alkaliphilus AHT2   1 1
No Yes Desulfotalea psychrophila LSv54   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfobacterium autotrophicum HRM2   1 1
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfohalobium retbaense DSM 5692   1 1
No Yes Desulfomicrobium baculatum DSM 4028   1 1
No Yes Desulfovibrio piezophilus   2 2
No Yes Desulfovibrio aespoeensis Aspo-2   2 2
No Yes Lawsonia intracellularis PHE/MN1-00   1 1
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Desulfovibrio alaskensis G20   1 1
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   1 1
No Yes Desulfovibrio salexigens DSM 2638   1 1
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   2 2
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   2 2
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Geobacter metallireducens GS-15   1 1
No Yes Pelobacter propionicus DSM 2379   1 1
No Yes Pelobacter carbinolicus DSM 2380   2 2
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Novosphingobium sp. PP1Y   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Acetobacter pasteurianus IFO 3283-01   1 1
No Yes Methylocella silvestris BL2   1 1
No Yes Teredinibacter turnerae T7901   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   2 2
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Methylomonas methanica MC09   1 1
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Baumannia cicadellinicola str. Hc (Homalodisca coagulata)   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   2 2
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   2 2
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   3 3
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   2 2
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pantoea sp. At-9b   2 2
No Yes Escherichia blattae DSM 4481   1 1
No Yes Candidatus Moranella endobia PCIT   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   2 2
No Yes Klebsiella variicola At-22   2 2
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   2 2
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   2 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Propionibacterium avidum 44067   1 1
No Yes Propionibacterium acnes ATCC 11828   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   1 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 2
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium acidurici 9a   2 2
No Yes Desulfosporosinus meridiei DSM 13257   2 2
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   2 2
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium saccharobutylicum DSM 13864   2 2
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium kluyveri NBRC 12016   2 2
No Yes Clostridium tetani genome 12124569   2 2
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   2 2
No Yes Clostridium botulinum H04402 065   3 3
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium botulinum B1 str. Okra   2 2
No Yes Clostridium botulinum Ba4 str. 657   2 2
No Yes Clostridium botulinum A2 str. Kyoto   2 2
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   2 2
No Yes Clostridium botulinum A str. ATCC 19397   2 2
No Yes Clostridium acetobutylicum DSM 1731   2 2
No Yes Clostridium acetobutylicum EA 2018   2 2
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   2 2
No Yes Thermoanaerobacter sp. X513   2 2
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   1 1
No Yes Enterococcus faecalis str. Symbioflor 1   2 2
No Yes Enterococcus faecalis D32   2 2
No Yes Enterococcus faecalis OG1RF   2 2
No Yes Enterococcus faecalis V583   2 2
No Yes Lactococcus garvieae Lg2   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Porphyromonas gingivalis W83   1 1
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Treponema pedis str. T A4   1 1
No Yes Treponema pallidum str. Fribourg-Blanc   1 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   1 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   1 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   1 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   1 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   1 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   1 1
No Yes Spirochaeta thermophila DSM 6578   1 1
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   2 2
No Yes Fusobacterium nucleatum subsp. animalis 4_8   2 2
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   1 1
No Yes Campylobacter jejuni RM1221   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2544   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2538   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2426   1 1
No Yes Campylobacter jejuni subsp. jejuni 00-2425   1 1
No Yes Campylobacter jejuni subsp. jejuni PT14   1 1
No Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001   1 1
No Yes Campylobacter jejuni subsp. jejuni S3   1 1
No Yes Campylobacter jejuni subsp. jejuni M1   1 1
No Yes Campylobacter jejuni subsp. jejuni IA3902   1 1
No Yes Campylobacter jejuni subsp. jejuni 81116   1 1
No Yes Campylobacter jejuni subsp. jejuni 81-176   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148   1 1
No Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819   1 1
No Yes Campylobacter coli 76339   1 1
No Yes Campylobacter coli 15-537360   1 1
No Yes Campylobacter coli CVM N29710   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   2 2
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Lawsonia intracellularis N343   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   4 4
No Yes Desulfovibrio vulgaris RCH1   1 1
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   1 1
No Yes Desulfovibrio vulgaris str. Hildenborough   1 1
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   1 1
No Yes Desulfovibrio desulfuricans ND132   3 3
No Yes Geobacter sp. M18   2 2
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Acetobacter pasteurianus 386B   1 1
No Yes Acetobacter pasteurianus IFO 3283-12   1 1
No Yes Acetobacter pasteurianus IFO 3283-01-42C   1 1
No Yes Acetobacter pasteurianus IFO 3283-32   1 1
No Yes Acetobacter pasteurianus IFO 3283-26   1 1
No Yes Acetobacter pasteurianus IFO 3283-22   1 1
No Yes Acetobacter pasteurianus IFO 3283-07   1 1
No Yes Acetobacter pasteurianus IFO 3283-03   1 1
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   2 2
No Yes Edwardsiella tarda FL6-60   2 2
No Yes Rahnella aquatilis HX2   2 2
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Candidatus Moranella endobia PCVAL   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   2 2
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   12 12
No Yes 5_050719P (meta-genome)   7 7
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   9 9
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   9 9
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   11 11
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   3 3
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   5 5
No Yes Fungus garden combined (combined) (meta-genome)   12 12
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   16 16
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   26 26
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   55 55
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   11 11
No Yes Human Gut Community Subject 8 (meta-genome)   8 8
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   19 19
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   27 27
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   14 14
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   8 8
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   7 7
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   2 2
No Yes NCBI 2017_08 genome   34331 34312
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   7 7
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   26 24
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   11 11
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   5 5
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   4 4
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   49 49
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   19 19
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   16 16
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   15 15
No Yes STRING v9.0.5 (STRING)   343 342
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   5 5
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   4 4
No Yes Uniprot 2018_03 genome   7238 7215
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   13 13
No Yes Global Ocean Sampling Expedition (GOS)   20 20
No Yes NCBI plasmid sequences (Plasmids)   8 8
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   41 41
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   60 60
No Yes TargetDB (Targets)   3 3
No Yes The Salmonella enterica Pan-genome (meta-genome)   30 30

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