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LysR-like transcriptional regulators family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1ixcA   2.94e-23   0.0000213   1-78   1ixc A:1-89  
2esnA   5.51e-18   0.0000128   7-91   2esn A:3-91  
 
Weak hits:
1al3A   0.000000000000413   0.0047   1-85   1ixc A:1-89  
1utbA   4.79e-18   0.0014   11-93   2esn A:3-91  
1utbB   4.79e-18   0.0014   11-93   2esn A:3-91  
1uthA   4.72e-18   0.0014   11-93   2esn A:3-91  
1uthB   3.86e-18   0.0014   11-93   2esn A:3-91  

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Select to display   Genome       Domains   Proteins
No Yes ALL   2570 2570
No Yes Burkholderia xenovorans LB400   1 1
No Yes Bordetella petrii DSM 12804   2 2
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes NCBI 2017_08 genome   2432 2432
No Yes STRING v9.0.5 (STRING)   7 7
No Yes Uniprot 2018_03 genome   57 57
No Yes NCBI plasmid sequences (Plasmids)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   12 12
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   31 31
No Yes TargetDB (Targets)   1 1

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