SUPERFAMILY 1.75 HMM library and genome assignments server

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HEPN domain family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   767 767
No Yes Halothece sp. PCC 7418   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Thermomicrobium roseum DSM 5159   3 3
No Yes Roseiflexus sp. RS-1   2 2
No Yes Roseiflexus castenholzii DSM 13941   2 2
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   2 2
No Yes Chloroflexus aurantiacus J-10-fl   2 2
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Thermus sp. CCB_US3_UF1   3 3
No Yes Thermus scotoductus SA-01   3 3
No Yes Thermus thermophilus HB27   2 2
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Ammonifex degensii KC4   1 1
No Yes Spirochaeta thermophila DSM 6192   3 3
No Yes Thermodesulfobacterium sp. OPB45   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Thermotoga thermarum DSM 5069   2 2
No Yes Thermotoga sp. RQ2   1 1
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga neapolitana DSM 4359   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Acidianus hospitalis W1   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Thermofilum pendens Hrk 5   1 1
No Yes Vulcanisaeta distributa DSM 14429   3 3
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   2 2
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Thermoproteus uzoniensis 768-20   2 2
No Yes Thermoproteus tenax Kra 1   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Thermus oshimai JL-2   2 2
No Yes Thermus thermophilus JL-18   4 4
No Yes Thermus thermophilus SG0.5JP17-16   2 2
No Yes Thermus thermophilus HB8   4 4
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Spirochaeta thermophila DSM 6578   3 3
No Yes Thermotoga maritima MSB8   1 1
No Yes Thermococcus sp. AM4   2 2
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Ferroplasma acidarmanus fer1   2 2
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   7 7
No Yes 3_050719R (meta-genome)   7 7
No Yes 4_050719Q (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   7 7
No Yes Bath Hot Springs, planktonic community (meta-genome)   8 8
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   8 8
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   206 206
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   35 35
No Yes Uniprot 2018_03 genome   261 261
No Yes NCBI plasmid sequences (Plasmids)   8 8
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   5 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   15 15
No Yes TargetDB (Targets)   5 5

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