SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Gametocyte protein Pfg27 superfamily domain assignments
in
all eukaryotic genomes

Network of domain occurrence in all genomes


Assignment details

(show help)

5 selected genomes have 6 significant domains in 6 proteins.


Plasmodium falciparum 3D7 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
PF13_0011   4.71e-98   21-206   Gametocyte protein Pfg27  
PFB0115w   7.45e-82   1008-1184   Gametocyte protein Pfg27  

Plasmodium vivax SaI-1 7.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gb|PVX_003560   8.24e-35   190-347   Gametocyte protein Pfg27  

Plasmodium knowlesi strain H has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PKH_041740   8.63e-35   213-373   Gametocyte protein Pfg27  
 
Weak hits:
PKH_061060   0.00445   82-158   Gametocyte protein Pfg27  
PKH_082000   0.0288   77-120   Gametocyte protein Pfg27  

Plasmodium falciparum HB3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PFHG_05440T0   5.62e-45   2-94   Gametocyte protein Pfg27  

Plasmodium falciparum Dd2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PFDG_04088T0   6.67e-82   924-1100   Gametocyte protein Pfg27  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Gametocyte protein Pfg27 domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   208 208
No Yes Plasmodium falciparum 3D7   2 2
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   42 42
No Yes Protozoadb 2010_08 (Protozoadb)   8 8
No Yes STRING v9.0.5 (STRING)   4 4
No Yes Uniprot 2018_03 genome   134 133
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]