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Collagen-binding domain superfamily domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 172 significant domains in 68 proteins.

Showing genomes 1 to 25 of 297
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Leptolyngbya sp. PCC 7376 has 13 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427725489|ref|YP_007072766.1|   0.000000000000314   1240-1350   Collagen-binding domain  
  0.0000000000248   756-857   Collagen-binding domain  
  0.000000000157   998-1096   Collagen-binding domain  
  0.000000000314   7-111   Collagen-binding domain  
  0.000000000314   873-982   Collagen-binding domain  
  0.00000000131   1144-1219   Collagen-binding domain  
  0.00000000968   405-485   Collagen-binding domain  
  0.000000262   146-236   Collagen-binding domain  
  0.00000209   1605-1699   Collagen-binding domain  
  0.00000275   277-360   Collagen-binding domain  
  0.00000288   1389-1469   Collagen-binding domain  
  0.00000602   644-741   Collagen-binding domain  
  0.0000366   531-605   Collagen-binding domain  
  0.0392   1485-1580   Collagen-binding domain  
 
Weak hits:
gi|427723765|ref|YP_007071042.1|   0.000458   263-357   Collagen-binding domain  

Pseudanabaena sp. PCC 7367 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428217007|ref|YP_007101472.1|   0.0000536   121-232   Collagen-binding domain  
 
Weak hits:
gi|428218343|ref|YP_007102808.1|   0.0889   296-369   Collagen-binding domain  
gi|428218761|ref|YP_007103226.1|   0.0183   63-141   Collagen-binding domain  

Synechocystis sp. PCC 6803 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|16329697|ref|NP_440425.1|   0.0000654   57-149   Collagen-binding domain  

Microcoleus sp. PCC 7113 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428311945|ref|YP_007122922.1|   0.0000000000102   8-111   Collagen-binding domain  
gi|428312682|ref|YP_007123659.1|   0.000000000000209   133-247   Collagen-binding domain  
gi|428313629|ref|YP_007124606.1|   0.00000000000157   45-139   Collagen-binding domain  
 
Weak hits:
gi|428308927|ref|YP_007119904.1|   0.000115   88-162   Collagen-binding domain  
gi|428311998|ref|YP_007122975.1|   0.0131   67-134   Collagen-binding domain  
gi|428312938|ref|YP_007123915.1|   0.00118   406-495   Collagen-binding domain  

Trichodesmium erythraeum IMS101 has 80 significant domains in 22 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|113474455|ref|YP_720516.1|   0.00000000000103   928-1008   Collagen-binding domain  
gi|113474457|ref|YP_720518.1|   0.000000000000222   1018-1114   Collagen-binding domain  
gi|113474508|ref|YP_720569.1|   0.0000000000536   1028-1110   Collagen-binding domain  
gi|113474517|ref|YP_720578.1|   6.41e-16   775-889   Collagen-binding domain  
gi|113474615|ref|YP_720676.1|   0.000000000641   4-112   Collagen-binding domain  
gi|113475163|ref|YP_721224.1|   0.000000000000262   105-219   Collagen-binding domain  
  0.00000000000114   254-336   Collagen-binding domain  
  0.00000000000209   363-453   Collagen-binding domain  
gi|113475335|ref|YP_721396.1|   0.000000000000111   45-148   Collagen-binding domain  
gi|113475444|ref|YP_721505.1|   0.00000000000392   1255-1336   Collagen-binding domain  
gi|113475503|ref|YP_721564.1|   2.62e-16   127-234   Collagen-binding domain  
  0.00000000000000523   243-347   Collagen-binding domain  
gi|113475558|ref|YP_721619.1|   0.000000000000327   573-662   Collagen-binding domain  
gi|113475559|ref|YP_721620.1|   0.0000000000000222   822-909   Collagen-binding domain  
  0.000000000000327   213-309   Collagen-binding domain  
  0.0000000000235   319-428   Collagen-binding domain  
  0.0000000000248   1060-1154   Collagen-binding domain  
  0.000000000183   948-1031   Collagen-binding domain  
  0.0000000275   587-669   Collagen-binding domain  
  0.000000209   464-544   Collagen-binding domain  
  0.000000497   708-785   Collagen-binding domain  
gi|113475560|ref|YP_721621.1|   0.00000000000000235   397-480   Collagen-binding domain  
  0.0000000000549   144-229   Collagen-binding domain  
  0.0000000000654   20-114   Collagen-binding domain  
  0.00000000589   770-854   Collagen-binding domain  
  0.00000484   497-595   Collagen-binding domain  
  0.0000183   631-712   Collagen-binding domain  
  0.000068   264-357   Collagen-binding domain  
gi|113475561|ref|YP_721622.1|   4.45e-18   2275-2377   Collagen-binding domain  
  6.28e-16   1568-1676   Collagen-binding domain  
  0.0000000000000196   1450-1557   Collagen-binding domain  
  0.0000000000000902   1687-1795   Collagen-binding domain  
  0.00000000000196   1232-1324   Collagen-binding domain  
  0.00000000000366   2511-2628   Collagen-binding domain  
  0.00000000000732   2048-2152   Collagen-binding domain  
  0.00000000000915   384-469   Collagen-binding domain  
  0.0000000000379   1116-1197   Collagen-binding domain  
  0.000000000392   1336-1437   Collagen-binding domain  
  0.000000000471   738-829   Collagen-binding domain  
  0.000000000981   111-228   Collagen-binding domain  
  0.00000000109   630-710   Collagen-binding domain  
  0.00000000144   509-589   Collagen-binding domain  
  0.0000000017   266-351   Collagen-binding domain  
  0.00000000615   1806-1915   Collagen-binding domain  
  0.00000000942   1930-2037   Collagen-binding domain  
  0.000000209   2420-2501   Collagen-binding domain  
  0.000000275   2185-2259   Collagen-binding domain  
gi|113475573|ref|YP_721634.1|   0.0000000000248   2107-2190   Collagen-binding domain  
gi|113475637|ref|YP_721698.1|   0.0000000000000353   1260-1347   Collagen-binding domain  
  0.0000000000000942   193-277   Collagen-binding domain  
  0.00000000000051   650-746   Collagen-binding domain  
  0.0000000000353   756-865   Collagen-binding domain  
  0.0000000000523   1385-1469   Collagen-binding domain  
  0.000000000837   1498-1592   Collagen-binding domain  
  0.00000000183   1024-1107   Collagen-binding domain  
  0.000000144   1142-1223   Collagen-binding domain  
  0.000000235   901-981   Collagen-binding domain  
gi|113476402|ref|YP_722463.1|   0.0000000000000116   625-716   Collagen-binding domain  
  0.000000000127   271-357   Collagen-binding domain  
  0.000000000235   394-476   Collagen-binding domain  
  0.000000000706   506-593   Collagen-binding domain  
  0.000000000889   118-238   Collagen-binding domain  
gi|113476963|ref|YP_723024.1|   0.0000000000000981   505-612   Collagen-binding domain  
  0.000000000000111   990-1089   Collagen-binding domain  
  0.000000000000144   624-731   Collagen-binding domain  
  0.00000000000017   862-969   Collagen-binding domain  
  0.000000000000235   743-850   Collagen-binding domain  
  0.000000000000314   386-493   Collagen-binding domain  
  0.000000000000654   267-374   Collagen-binding domain  
  0.00000000000418   147-255   Collagen-binding domain  
  0.0000000000222   1100-1203   Collagen-binding domain  
gi|113477379|ref|YP_723440.1|   0.00000000000314   895-1007   Collagen-binding domain  
gi|113477710|ref|YP_723771.1|   3.27e-17   124-231   Collagen-binding domain  
  5.36e-17   240-348   Collagen-binding domain  
  1.22e-16   11-116   Collagen-binding domain  
gi|113477895|ref|YP_723956.1|   0.0000000000863   1131-1218   Collagen-binding domain  
gi|113477896|ref|YP_723957.1|   0.000000000000353   1137-1221   Collagen-binding domain  
gi|113477960|ref|YP_724021.1|   1.83e-17   115-220   Collagen-binding domain  
  0.00000000000379   628-713   Collagen-binding domain  
  0.00000000981   744-831   Collagen-binding domain  
 
Weak hits:
gi|113476999|ref|YP_723060.1|   0.00798   66-150   Collagen-binding domain  
gi|113477181|ref|YP_723242.1|   0.00235   291-374   Collagen-binding domain  
gi|113477182|ref|YP_723243.1|   0.0405   140-223   Collagen-binding domain  

Geitlerinema sp. PCC 7407 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428224674|ref|YP_007108771.1|   0.000000314   300-389   Collagen-binding domain  
 
Weak hits:
gi|428226485|ref|YP_007110582.1|   0.0327   201-276   Collagen-binding domain  

Gloeocapsa sp. PCC 7428 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|434393545|ref|YP_007128492.1|   0.000000000000034   7-122   Collagen-binding domain  
  0.000000000824   130-242   Collagen-binding domain  
gi|434395093|ref|YP_007130040.1|   6.28e-16   65-170   Collagen-binding domain  
 
Weak hits:
gi|434395820|ref|YP_007130562.1|   0.0144   1386-1477   Collagen-binding domain  
gi|434395821|ref|YP_007130563.1|   0.00432   1068-1167   Collagen-binding domain  

Halothece sp. PCC 7418 has 8 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428775259|ref|YP_007167046.1|   0.000000000235   310-407   Collagen-binding domain  
gi|428775653|ref|YP_007167440.1|   0.0000000000105   246-353   Collagen-binding domain  
  0.0000484   134-224   Collagen-binding domain  
  0.0209   27-119   Collagen-binding domain  
gi|428776650|ref|YP_007168437.1|   0.000000000327   1916-2030   Collagen-binding domain  
  0.000000017   952-1065   Collagen-binding domain  
  0.0000128   1789-1904   Collagen-binding domain  
  0.0000183   1324-1434   Collagen-binding domain  
  0.0000209   1077-1191   Collagen-binding domain  
  0.000288   677-797   Collagen-binding domain  
  0.00183   1679-1777   Collagen-binding domain  
  0.00235   428-544   Collagen-binding domain  
  0.0183   305-417   Collagen-binding domain  
 
Weak hits:
gi|428775225|ref|YP_007167012.1|   0.000981   2036-2134   Collagen-binding domain  
  0.0034   2337-2434   Collagen-binding domain  
  0.0068   2934-3031   Collagen-binding domain  
  0.0126   3133-3230   Collagen-binding domain  
  0.0157   2235-2333   Collagen-binding domain  
  0.017   2735-2832   Collagen-binding domain  
gi|428778257|ref|YP_007170044.1|   0.000262   64-140   Collagen-binding domain  

Microcystis aeruginosa NIES-843 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|166365764|ref|YP_001658037.1|   0.00000981   65-142   Collagen-binding domain  
gi|166367424|ref|YP_001659697.1|   7.45e-22   215-317   Collagen-binding domain  
  1.19e-21   100-202   Collagen-binding domain  
gi|166367965|ref|YP_001660238.1|   0.00000732   405-502   Collagen-binding domain  
 
Weak hits:
gi|166363104|ref|YP_001655377.1|   0.0105   248-319   Collagen-binding domain  
gi|166364405|ref|YP_001656678.1|   0.0262   9-115   Collagen-binding domain  

Gloeobacter violaceus PCC 7421 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|37522028|ref|NP_925405.1|   0.0000000000589   116-217   Collagen-binding domain  
  0.00000000183   227-331   Collagen-binding domain  

Rivularia sp. PCC 7116 has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427734485|ref|YP_007054029.1|   0.00000262   25-104   Collagen-binding domain  
gi|427734486|ref|YP_007054030.1|   0.000000000000109   143-247   Collagen-binding domain  
  0.00000000000144   33-134   Collagen-binding domain  
gi|427738429|ref|YP_007057973.1|   0.00000000000000602   58-172   Collagen-binding domain  
gi|427739286|ref|YP_007058830.1|   0.0000000628   257-358   Collagen-binding domain  
 
Weak hits:
gi|427733787|ref|YP_007053331.1|   0.0235   85-180   Collagen-binding domain  
gi|427734802|ref|YP_007054346.1|   0.00693   93-160   Collagen-binding domain  
gi|427735239|ref|YP_007054783.1|   0.0131   1147-1283   Collagen-binding domain  
gi|427736903|ref|YP_007056447.1|   0.00183   283-349   Collagen-binding domain  
gi|427737736|ref|YP_007057280.1|   0.000445   72-142   Collagen-binding domain  
gi|427738531|ref|YP_007058075.1|   0.000327   28-100   Collagen-binding domain  

Calothrix sp. PCC 7507 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427719350|ref|YP_007067344.1|   5.49e-17   4-111   Collagen-binding domain  
  0.0000000000000275   119-226   Collagen-binding domain  
 
Weak hits:
gi|427715811|ref|YP_007063805.1|   0.00183   68-137   Collagen-binding domain  
gi|427718397|ref|YP_007066391.1|   0.00118   323-403   Collagen-binding domain  
gi|427718486|ref|YP_007066480.1|   0.017   97-159   Collagen-binding domain  
gi|427719341|ref|YP_007067335.1|   0.0012   702-802   Collagen-binding domain  
gi|427720940|ref|YP_007068934.1|   0.00536   75-137   Collagen-binding domain  

Anabaena variabilis ATCC 29413 has 9 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|75907858|ref|YP_322154.1|   1.31e-18   3-108   Collagen-binding domain  
  0.000000000000876   694-797   Collagen-binding domain  
  0.0000000000157   234-338   Collagen-binding domain  
  0.0000000000458   348-451   Collagen-binding domain  
  0.0000000000641   464-574   Collagen-binding domain  
  0.000000000157   118-226   Collagen-binding domain  
  0.000000785   583-684   Collagen-binding domain  
gi|75908107|ref|YP_322403.1|   4.97e-19   7-118   Collagen-binding domain  
  3.53e-17   239-347   Collagen-binding domain  
 
Weak hits:
gi|75906830|ref|YP_321126.1|   0.000575   67-138   Collagen-binding domain  
gi|75907889|ref|YP_322185.1|   0.0405   110-160   Collagen-binding domain  
gi|75909398|ref|YP_323694.1|   0.00131   84-156   Collagen-binding domain  
gi|75911050|ref|YP_325346.1|   0.017   324-405   Collagen-binding domain  

Nostoc sp. PCC 7107 has 8 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427707048|ref|YP_007049425.1|   0.0000902   58-138   Collagen-binding domain  
gi|427707270|ref|YP_007049647.1|   5.62e-20   654-757   Collagen-binding domain  
  2.48e-18   538-641   Collagen-binding domain  
  5.62e-18   769-872   Collagen-binding domain  
  8.37e-16   884-988   Collagen-binding domain  
  9.68e-16   203-309   Collagen-binding domain  
  0.00000000000000275   316-420   Collagen-binding domain  
  0.00000000000000301   427-531   Collagen-binding domain  
 
Weak hits:
gi|427706512|ref|YP_007048889.1|   0.00392   328-406   Collagen-binding domain  
gi|427707350|ref|YP_007049727.1|   0.0017   429-524   Collagen-binding domain  
gi|427708180|ref|YP_007050557.1|   0.017   94-156   Collagen-binding domain  

Nostoc punctiforme PCC 73102 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|186685931|ref|YP_001869127.1|   0.00000000000000144   147-245   Collagen-binding domain  
  0.000000942   20-117   Collagen-binding domain  
 
Weak hits:
gi|186680597|ref|YP_001863793.1|   0.0824   60-102   Collagen-binding domain  
gi|186680804|ref|YP_001864000.1|   0.0011   67-136   Collagen-binding domain  
gi|186680848|ref|YP_001864044.1|   0.00301   65-138   Collagen-binding domain  
gi|186681814|ref|YP_001865010.1|   0.00471   70-156   Collagen-binding domain  
gi|186685798|ref|YP_001868994.1|   0.00105   91-160   Collagen-binding domain  

Nostoc sp. PCC 7120 has 10 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|17227865|ref|NP_484413.1|   1.29e-17   7-117   Collagen-binding domain  
gi|17228579|ref|NP_485127.1|   0.0000000000144   16-123   Collagen-binding domain  
gi|17231080|ref|NP_487628.1|   2.22e-21   146-258   Collagen-binding domain  
  0.0000000000106   382-494   Collagen-binding domain  
  0.000000131   275-371   Collagen-binding domain  
  0.0000123   47-130   Collagen-binding domain  
gi|17231307|ref|NP_487855.1|   3.27e-18   7-118   Collagen-binding domain  
  3.53e-18   241-347   Collagen-binding domain  
gi|62946414|ref|YP_227619.1|   0.000000000562   144-238   Collagen-binding domain  
  0.00000523   19-111   Collagen-binding domain  
 
Weak hits:
gi|17228311|ref|NP_484859.1|   0.000209   61-138   Collagen-binding domain  
gi|17230146|ref|NP_486694.1|   0.011   1042-1172   Collagen-binding domain  
gi|17230147|ref|NP_486695.1|   0.00745   1484-1617   Collagen-binding domain  
gi|17230610|ref|NP_487158.1|   0.0115   329-412   Collagen-binding domain  
gi|17231135|ref|NP_487683.1|   0.000628   87-159   Collagen-binding domain  

Nostoc sp. PCC 7524 has 4 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427731228|ref|YP_007077465.1|   1.83e-17   149-257   Collagen-binding domain  
  0.000000000017   395-481   Collagen-binding domain  
  0.000000000536   267-367   Collagen-binding domain  
  0.000000183   43-130   Collagen-binding domain  
 
Weak hits:
gi|427728552|ref|YP_007074789.1|   0.00719   90-160   Collagen-binding domain  
gi|427728713|ref|YP_007074950.1|   0.0085   85-156   Collagen-binding domain  
gi|427728917|ref|YP_007075154.1|   0.000222   1592-1684   Collagen-binding domain  
  0.00288   1998-2089   Collagen-binding domain  
  0.0034   2968-3059   Collagen-binding domain  
gi|427729674|ref|YP_007075911.1|   0.000107   382-478   Collagen-binding domain  

Anabaena sp. 90 has 5 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|414078134|ref|YP_006997452.1|   9.02e-17   481-587   Collagen-binding domain  
gi|414078543|ref|YP_006997861.1|   3.66e-20   165-268   Collagen-binding domain  
  2.48e-19   52-154   Collagen-binding domain  
  1.57e-17   279-382   Collagen-binding domain  
gi|414078930|ref|YP_006998248.1|   0.0000562   144-276   Collagen-binding domain  
 
Weak hits:
gi|414075595|ref|YP_006994913.1|   0.0196   350-431   Collagen-binding domain  
gi|414077288|ref|YP_006996606.1|   0.000288   67-136   Collagen-binding domain  

Stackebrandtia nassauensis DSM 44728 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|291299083|ref|YP_003510361.1|   0.0000144   436-489   Collagen-binding domain  

Streptosporangium roseum DSM 43021 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|271964002|ref|YP_003338198.1|   0.0000445   434-498   Collagen-binding domain  
gi|271967090|ref|YP_003341286.1|   0.0000379   650-724   Collagen-binding domain  
 
Weak hits:
gi|271970094|ref|YP_003344290.1|   0.0107   458-519   Collagen-binding domain  
gi|271970095|ref|YP_003344291.1|   0.0327   441-495   Collagen-binding domain  
gi|271970097|ref|YP_003344293.1|   0.0484   440-496   Collagen-binding domain  

Kribbella flavida DSM 17836 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|284032192|ref|YP_003382123.1|   0.0000301   444-545   Collagen-binding domain  
 
Weak hits:
gi|284032377|ref|YP_003382308.1|   0.0235   49-119   Collagen-binding domain  
gi|284034881|ref|YP_003384812.1|   0.000405   356-460   Collagen-binding domain  

Actinoplanes sp. SE50/110 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386848737|ref|YP_006266750.1|   0.00000000000379   355-465   Collagen-binding domain  

Intrasporangium calvum DSM 43043 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|317126174|ref|YP_004100286.1|   0.0000314   238-338   Collagen-binding domain  

Cellulomonas fimi ATCC 484 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|332669641|ref|YP_004452649.1|   0.00000955   416-487   Collagen-binding domain  

Caldilinea aerophila DSM 14535 = NBRC 104270 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|383763588|ref|YP_005442570.1|   0.00000144   357-469   Collagen-binding domain  
  0.000209   236-346   Collagen-binding domain  
  0.000602   511-589   Collagen-binding domain  
gi|383763589|ref|YP_005442571.1|   0.000000000288   630-743   Collagen-binding domain  
gi|383763590|ref|YP_005442572.1|   0.00000116   103-202   Collagen-binding domain  
gi|383764620|ref|YP_005443602.1|   0.0000144   263-358   Collagen-binding domain  
 
Weak hits:
gi|383761945|ref|YP_005440927.1|   0.0209   214-302   Collagen-binding domain  
gi|383764017|ref|YP_005442999.1|   0.000759   358-472   Collagen-binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   22032 22032
No Yes Proterospongia sp. ATCC 50818   7 4
No Yes Monosiga brevicollis   3 3
No Yes Gossypium raimondii v221   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Physcomitrella patens   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Theileria parva   1 1
No Yes Leptolyngbya sp. PCC 7376   13 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Microcoleus sp. PCC 7113   3 3
No Yes Trichodesmium erythraeum IMS101   80 22
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Gloeocapsa sp. PCC 7428   3 2
No Yes Halothece sp. PCC 7418   8 3
No Yes Microcystis aeruginosa NIES-843   4 3
No Yes Gloeobacter violaceus PCC 7421   2 1
No Yes Rivularia sp. PCC 7116   5 4
No Yes Calothrix sp. PCC 7507   2 1
No Yes Anabaena variabilis ATCC 29413   9 2
No Yes Nostoc sp. PCC 7107   8 2
No Yes Nostoc punctiforme PCC 73102   2 1
No Yes Nostoc sp. PCC 7120   10 5
No Yes Nostoc sp. PCC 7524   4 1
No Yes Anabaena sp. 90   5 3
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kribbella flavida DSM 17836   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   4 4
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Herpetosiphon aurantiacus DSM 785   4 4
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   9 2
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   9 2
No Yes Deinococcus gobiensis I-0   3 3
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   4 4
No Yes Deinococcus geothermalis DSM 11300   2 2
No Yes Deinococcus proteolyticus MRP   2 2
No Yes Deinococcus radiodurans R1   3 3
No Yes Oceanithermus profundus DSM 14977   2 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Clostridium clariflavum DSM 19732   6 2
No Yes Clostridium thermocellum ATCC 27405   3 1
No Yes Thermincola potens JR   2 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   3 1
No Yes Roseburia hominis A2-183   1 1
No Yes Roseburia intestinalis   7 3
No Yes Clostridium sp. BNL1100   2 1
No Yes Clostridium novyi NT   2 1
No Yes Clostridium tetani E88   3 2
No Yes Clostridium perfringens ATCC 13124   2 1
No Yes Clostridium cellulovorans 743B   11 3
No Yes Clostridium botulinum A str. ATCC 3502   5 2
No Yes Mahella australiensis 50-1 BON   2 2
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus amylovorus GRL1118   2 2
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Streptococcus agalactiae A909   1 1
No Yes Exiguobacterium sp. MH3   3 2
No Yes Exiguobacterium sp. AT1b   5 2
No Yes Exiguobacterium sibiricum 255-15   2 1
No Yes Brevibacillus brevis NBRC 100599   9 5
No Yes Paenibacillus sp. JDR-2   2 1
No Yes Paenibacillus terrae HPL-003   3 3
No Yes Paenibacillus mucilaginosus 3016   2 1
No Yes Paenibacillus polymyxa M1   3 3
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Lysinibacillus sphaericus C3-41   2 1
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus sp. WCH70   4 2
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   4 4
No Yes Bacillus thuringiensis str. Al Hakam   3 3
No Yes Bacillus cereus 03BB102   3 3
No Yes Bacillus anthracis str. A0248   4 4
No Yes Bacillus megaterium DSM 319   2 2
No Yes Chlorobium chlorochromatii CaD3   3 1
No Yes Haliscomenobacter hydrossis DSM 1100   2 1
No Yes Niastella koreensis GR20-10   4 4
No Yes Chitinophaga pinensis DSM 2588   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   2 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   3 3
No Yes Pirellula staleyi DSM 6068   3 3
No Yes Brachyspira murdochii DSM 12563   2 2
No Yes Brachyspira intermedia PWS/A   2 2
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Treponema azotonutricium ZAS-9   2 1
No Yes Treponema primitia ZAS-2   5 2
No Yes Spirochaeta thermophila DSM 6192   2 1
No Yes Candidatus Solibacter usitatus Ellin6076   5 4
No Yes Bacteriovorax marinus SJ   2 1
No Yes Desulfatibacillum alkenivorans AK-01   3 2
No Yes Desulfobacterium autotrophicum HRM2   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Leptothrix cholodnii SP-6   2 2
No Yes Nitrosospira multiformis ATCC 25196   2 1
No Yes Nitrosomonas europaea ATCC 19718   2 1
No Yes Pseudovibrio sp. FO-BEG1   2 2
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Azospirillum lipoferum 4B   2 2
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   3 3
No Yes Vibrio sp. Ex25   2 2
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   2 2
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella violacea DSS12   2 2
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Kangiella koreensis DSM 16069   4 4
No Yes Methylomonas methanica MC09   2 2
No Yes Rhodanobacter denitrificans   2 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Methanosaeta harundinacea 6Ac   3 2
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Dactylococcopsis salina PCC 8305   11 7
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   2 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   7 6
No Yes Oscillatoria acuminata PCC 6304   17 8
No Yes Arthrospira platensis NIES-39   40 15
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   5 3
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   3 3
No Yes Cylindrospermum stagnale PCC 7417   2 1
No Yes Anabaena cylindrica PCC 7122   5 4
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes Clostridium thermocellum DSM 1313   3 1
No Yes Roseburia intestinalis XB6B4   6 2
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   3 3
No Yes Clostridium tetani genome 12124569   3 2
No Yes Clostridium perfringens SM101   2 1
No Yes Clostridium perfringens str. 13   2 1
No Yes Clostridium botulinum H04402 065   5 2
No Yes Clostridium botulinum BKT015925   2 1
No Yes Clostridium botulinum F str. 230613   2 1
No Yes Clostridium botulinum F str. Langeland   5 2
No Yes Clostridium botulinum E3 str. Alaska E43   3 1
No Yes Clostridium botulinum B1 str. Okra   5 2
No Yes Clostridium botulinum Ba4 str. 657   4 2
No Yes Clostridium botulinum A2 str. Kyoto   5 2
No Yes Clostridium botulinum A3 str. Loch Maree   5 2
No Yes Clostridium botulinum A str. Hall   3 1
No Yes Clostridium botulinum A str. ATCC 19397   3 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae ILRI005   1 1
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae SA20-06   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   1 1
No Yes Streptococcus agalactiae 2603V/R   1 1
No Yes Thermobacillus composti KWC4   2 1
No Yes Paenibacillus mucilaginosus KNP414   2 1
No Yes Paenibacillus mucilaginosus K02   2 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   6 4
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   3 3
No Yes Paenibacillus polymyxa E681   3 3
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   4 4
No Yes Bacillus thuringiensis HD-771   3 3
No Yes Bacillus thuringiensis HD-789   3 3
No Yes Bacillus thuringiensis MC28   4 4
No Yes Bacillus thuringiensis serovar chinensis CT-43   4 4
No Yes Bacillus thuringiensis YBT-1518   7 7
No Yes Bacillus thuringiensis Bt407   5 5
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 3
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   5 5
No Yes Bacillus thuringiensis BMB171   5 5
No Yes Bacillus thuringiensis serovar finitimus YBT-020   3 3
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   6 6
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   3 3
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   4 4
No Yes Bacillus cereus G9842   3 3
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   3 3
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   4 4
No Yes Bacillus cereus ATCC 14579   5 5
No Yes Bacillus cereus ATCC 10987   3 3
No Yes Bacillus anthracis str. H9401   4 4
No Yes Bacillus anthracis str. CDC 684   4 4
No Yes Bacillus anthracis str. 'Ames Ancestor'   4 4
No Yes Bacillus anthracis str. Sterne   4 4
No Yes Bacillus anthracis str. Ames   4 4
No Yes Bacillus coagulans 36D1   4 1
No Yes Prevotella dentalis DSM 3688   6 1
No Yes Riemerella anatipestifer RA-CH-2   1 1
No Yes Riemerella anatipestifer RA-CH-1   1 1
No Yes Riemerella anatipestifer RA-GD   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   2 1
No Yes Spirochaeta thermophila DSM 6578   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Variovorax paradoxus B4   1 1
No Yes Paracoccus aminophilus JCM 7686   2 2
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   2 2
No Yes Vibrio nigripulchritudo VibrioScope   2 2
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   5 2
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   15 15
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   14 13
No Yes 5_050719P (meta-genome)   18 16
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   2 2
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   3 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   3 3
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   9 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   10 10
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   25 25
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   3 3
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   3 3
No Yes NCBI 2017_08 genome   12196 10172
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   8 8
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   5 3
No Yes Protozoadb 2010_08 (Protozoadb)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   18 15
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   5 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   14 13
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   18 18
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   17 17
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   15 15
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   12 12
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   366 226
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   12 12
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   7311 5745
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   5 4
No Yes Global Ocean Sampling Expedition (GOS)   284 219
No Yes NCBI plasmid sequences (Plasmids)   19 16
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   18 17
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   49 49
No Yes TargetDB (Targets)   30 21

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