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DNA replication initiator (cdc21/cdc54) N-terminal domain family domain assignments
in
all archaeal genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 1 to 25 of 126
  1 2 3 4 5 6   Next Last

Candidatus Caldiarchaeum subterraneum has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|557694494|ref|YP_008797548.1|   1.06e-55   0.0000747   9-245   1ltl A:  

Acidilobus saccharovorans 345-15 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|302348721|ref|YP_003816359.1|   3.43e-61   0.0000934   14-260   1ltl A:  

Pyrolobus fumarii 1A has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|347522587|ref|YP_004780157.1|   5.31e-62   0.0001   19-267   1ltl A:  

Hyperthermus butylicus DSM 5456 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|124027777|ref|YP_001013097.1|   1.88e-63   0.0000406   16-264   1ltl A:  

Ignicoccus hospitalis KIN4/I has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|156938084|ref|YP_001435880.1|   3.08e-60   0.0000669   16-258   1ltl A:  

Thermosphaera aggregans DSM 11486 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|296241867|ref|YP_003649354.1|   2.91e-62   0.0000977   17-267   1ltl A:  

Staphylothermus hellenicus DSM 12710 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|297527203|ref|YP_003669227.1|   2.57e-61   0.0000388   18-266   1ltl A:  

Staphylothermus marinus F1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|126466120|ref|YP_001041229.1|   1.32e-62   0.0000323   18-264   1ltl A:  

Sulfolobus islandicus Y.N.15.51 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229582093|ref|YP_002840492.1|   8.74e-63   0.0000577   13-259   1ltl A:  

Sulfolobus solfataricus P2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|15897676|ref|NP_342281.1|   5.48e-62   0.0000609   13-259   1ltl A:  

Sulfolobus acidocaldarius DSM 639 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|70606686|ref|YP_255556.1|   7.2e-62   0.0000496   12-259   1ltl A:  

Thermofilum sp. 1910b has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|530780331|ref|YP_008432137.1|   6.34e-61   0.0000496   18-262   1ltl A:  

Thermofilum pendens Hrk 5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|119719412|ref|YP_919907.1|   5.48e-61   0.000055   14-259   1ltl A:  

Vulcanisaeta moutnovskia 768-28 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|325968710|ref|YP_004244902.1|   3.43e-59   0.0000492   25-253   1ltl A:  

Vulcanisaeta distributa DSM 14429 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|307594652|ref|YP_003900969.1|   4.11e-61   0.000051   24-253   1ltl A:  

Caldivirga maquilingensis IC-167 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|159040966|ref|YP_001540218.1|   4.8e-55   0.0000925   26-252   1ltl A:  

Pyrobaculum sp. 1860 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|374327794|ref|YP_005085994.1|   2.23e-60   0.0000501   19-245   1ltl A:  

Pyrobaculum calidifontis JCM 11548 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|126458712|ref|YP_001054990.1|   4.97e-61   0.0000435   18-245   1ltl A:  

Pyrobaculum arsenaticum DSM 13514 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|145590378|ref|YP_001152380.1|   1.71e-58   0.0000373   21-246   1ltl A:  

Pyrobaculum oguniense TE7 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|379005338|ref|YP_005261010.1|   4.97e-58   0.0000386   21-246   1ltl A:  

Thermoproteus neutrophilus V24Sta has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|171184589|ref|YP_001793508.1|   8.91e-59   0.0000467   22-238   1ltl A:  

Pyrobaculum aerophilum str. IM2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|18312259|ref|NP_558926.1|   6e-60   0.0000459   19-246   1ltl A:  

Pyrobaculum islandicum DSM 4184 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|119872659|ref|YP_930666.1|   1.49e-60   0.0000421   20-246   1ltl A:  

Thermoproteus uzoniensis 768-20 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|327310017|ref|YP_004336914.1|   1.52e-60   0.0000428   19-244   1ltl A:  

Thermoproteus tenax Kra 1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|352681506|ref|YP_004892030.1|   6e-61   0.0000373   24-248   1ltl A:  

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Showing genomes 1 to 25 of 126

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View all assignments containing a DNA replication initiator (cdc21/cdc54) N-terminal domain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   1900 1900
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Acidilobus saccharovorans 345-15   1 1
No Yes Pyrolobus fumarii 1A   1 1
No Yes Hyperthermus butylicus DSM 5456   1 1
No Yes Ignicoccus hospitalis KIN4/I   1 1
No Yes Thermosphaera aggregans DSM 11486   1 1
No Yes Staphylothermus hellenicus DSM 12710   1 1
No Yes Staphylothermus marinus F1   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Thermofilum pendens Hrk 5   1 1
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Vulcanisaeta distributa DSM 14429   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes Thermoproteus tenax Kra 1   1 1
No Yes halophilic archaeon DL31   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella conradii HZ254   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanosalsum zhilinae DSM 4017   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   2 2
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanohalophilus mahii DSM 5219   1 1
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Methanocorpusculum labreanum Z   1 1
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus profundus DSM 5631   1 1
No Yes Archaeoglobus veneficus SNP6   1 1
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Natrinema sp. J7-2   1 1
No Yes Natrialba magadii ATCC 43099   1 1
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Haloquadratum walsbyi DSM 16790   1 1
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Haloferax volcanii DS2   1 1
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Natronomonas pharaonis DSM 2160   2 2
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanothermus fervidus DSM 2088   1 1
No Yes Methanothermobacter marburgensis str. Marburg   1 1
No Yes Methanothermobacter thermautotrophicus str. Delta H   1 1
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter ruminantium M1   2 2
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Caldisphaera lagunensis DSM 15908   1 1
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Methanomethylovorans hollandica DSM 15978   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   2 2
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   1 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   2 2
No Yes Ferroplasma acidarmanus fer1   1 1
No Yes Halovivax ruber XH-70   1 1
No Yes Natrinema pellirubrum DSM 15624   2 2
No Yes Natronococcus occultus SP4   1 1
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Methanobacterium sp. SWAN-1   1 1
No Yes 2_050719S (meta-genome)   2 2
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   5 5
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   630 630
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   53 53
No Yes Uniprot 2018_03 genome   873 873
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   3 3
No Yes Global Ocean Sampling Expedition (GOS)   12 12
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   50 50
No Yes TargetDB (Targets)   10 10

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