SUPERFAMILY 1.75 HMM library and genome assignments server

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Fucose-specific lectin superfamily domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 101 significant domains in 81 proteins.

Showing genomes 1 to 25 of 201
  1 2 3 4 5 6 7 8 9   Next Last

Geitlerinema sp. PCC 7407 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428225392|ref|YP_007109489.1|   8.63e-17   304-518   Fucose-specific lectin  

Gloeobacter violaceus PCC 7421 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|37519722|ref|NP_923099.1|   0.0000000000000017   413-606   Fucose-specific lectin  
  0.0000000112   273-410   Fucose-specific lectin  
gi|37523016|ref|NP_926393.1|   0.00000196   114-233   Fucose-specific lectin  
 
Weak hits:
gi|37523803|ref|NP_927180.1|   0.000275   58-280   Fucose-specific lectin  

Rivularia sp. PCC 7116 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427735467|ref|YP_007055011.1|   9.15e-39   540-745   Fucose-specific lectin  
  0.000432   478-532   Fucose-specific lectin  

Calothrix sp. PCC 7507 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427717068|ref|YP_007065062.1|   0.00000445   372-527   Fucose-specific lectin  
 
Weak hits:
gi|427720891|ref|YP_007068885.1|   0.00785   63-162   Fucose-specific lectin  

Anabaena sp. 90 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|414078134|ref|YP_006997452.1|   0.0000000000000115   213-473   Fucose-specific lectin  
gi|414078169|ref|YP_006997487.1|   0.00000000000000196   236-421   Fucose-specific lectin  
 
Weak hits:
gi|414076637|ref|YP_006995955.1|   0.0222   309-392   Fucose-specific lectin  
gi|414078797|ref|YP_006998115.1|   0.0222   249-306   Fucose-specific lectin  

Conexibacter woesei DSM 14684 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|284041896|ref|YP_003392236.1|   0.0000000000654   37-333   Fucose-specific lectin  
gi|284042889|ref|YP_003393229.1|   0.0000575   101-302   Fucose-specific lectin  
gi|284042891|ref|YP_003393231.1|   0.000000000628   590-779   Fucose-specific lectin  
  0.0000000111   454-629   Fucose-specific lectin  
 
Weak hits:
gi|284042890|ref|YP_003393230.1|   0.00275   116-233   Fucose-specific lectin  
  0.0366   12-153   Fucose-specific lectin  
gi|284045249|ref|YP_003395589.1|   0.0123   62-187   Fucose-specific lectin  
gi|284046832|ref|YP_003397172.1|   0.000798   230-357   Fucose-specific lectin  

Modestobacter marinus has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|389867051|ref|YP_006369292.1|   0.000000000000034   284-496   Fucose-specific lectin  

Blastococcus saxobsidens DD2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|379736150|ref|YP_005329656.1|   0.0000000034   510-584   Fucose-specific lectin  

Catenulispora acidiphila DSM 44928 has 7 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|256389772|ref|YP_003111336.1|   0.00000000667   334-599   Fucose-specific lectin  
gi|256390604|ref|YP_003112168.1|   2.35e-19   468-706   Fucose-specific lectin  
gi|256391246|ref|YP_003112810.1|   2.49e-22   312-552   Fucose-specific lectin  
gi|256394186|ref|YP_003115750.1|   0.0000107   323-406   Fucose-specific lectin  
  0.0000523   421-543   Fucose-specific lectin  
gi|256396564|ref|YP_003118128.1|   0.00000000000000196   461-698   Fucose-specific lectin  
gi|256397121|ref|YP_003118685.1|   9.16e-16   375-654   Fucose-specific lectin  
 
Weak hits:
gi|256390252|ref|YP_003111816.1|   0.00131   174-335   Fucose-specific lectin  
gi|256392705|ref|YP_003114269.1|   0.034   23-96   Fucose-specific lectin  
gi|256394181|ref|YP_003115745.1|   0.000235   629-750   Fucose-specific lectin  
  0.0144   394-611   Fucose-specific lectin  
gi|256395871|ref|YP_003117435.1|   0.000327   369-505   Fucose-specific lectin  
gi|256398079|ref|YP_003119643.1|   0.0902   147-208   Fucose-specific lectin  

Stackebrandtia nassauensis DSM 44728 has 9 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|291299455|ref|YP_003510733.1|   0.00000262   158-225,265-314   Fucose-specific lectin  
gi|291300253|ref|YP_003511531.1|   1.31e-19   3-184   Fucose-specific lectin  
  1.18e-18   137-351   Fucose-specific lectin  
gi|291300313|ref|YP_003511591.1|   5.1e-19   331-532   Fucose-specific lectin  
  0.00000000000131   549-660   Fucose-specific lectin  
gi|291302211|ref|YP_003513489.1|   0.000000000011   15-183   Fucose-specific lectin  
gi|291302691|ref|YP_003513969.1|   0.00000157   348-571   Fucose-specific lectin  
gi|291303120|ref|YP_003514398.1|   0.00000000209   443-578   Fucose-specific lectin  
  0.0000000116   541-700   Fucose-specific lectin  
 
Weak hits:
gi|291298463|ref|YP_003509741.1|   0.0183   44-190   Fucose-specific lectin  
gi|291299238|ref|YP_003510516.1|   0.0235   104-186   Fucose-specific lectin  
gi|291300409|ref|YP_003511687.1|   0.00876   52-104   Fucose-specific lectin  

Frankia symbiont of Datisca glomerata has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|336176433|ref|YP_004581808.1|   2.35e-25   5-241   Fucose-specific lectin  
  0.0000562   264-342   Fucose-specific lectin  
gi|336178898|ref|YP_004584273.1|   0.000000628   516-702   Fucose-specific lectin  

Frankia alni ACN14a has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|111221651|ref|YP_712445.1|   0.00000562   618-736   Fucose-specific lectin  
gi|111221807|ref|YP_712601.1|   6.54e-20   6-226   Fucose-specific lectin  
 
Weak hits:
gi|111222094|ref|YP_712888.1|   0.0248   80-125   Fucose-specific lectin  
gi|111222264|ref|YP_713058.1|   0.0327   44-126   Fucose-specific lectin  

Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|297560837|ref|YP_003679811.1|   0.000000000085   17-225   Fucose-specific lectin  
 
Weak hits:
gi|297560831|ref|YP_003679805.1|   0.0288   329-359   Fucose-specific lectin  

Streptosporangium roseum DSM 43021 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|271965715|ref|YP_003339911.1|   4.05e-21   163-421   Fucose-specific lectin  
gi|271966973|ref|YP_003341169.1|   0.0000301   161-225   Fucose-specific lectin  
 
Weak hits:
gi|271962523|ref|YP_003336719.1|   0.034   93-142   Fucose-specific lectin  
gi|271966793|ref|YP_003340989.1|   0.0915   161-241   Fucose-specific lectin  
gi|271966959|ref|YP_003341155.1|   0.0497   26-106   Fucose-specific lectin  

Kitasatospora setae KM-6054 has 13 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|357387435|ref|YP_004902274.1|   0.0000000000235   62-151   Fucose-specific lectin  
gi|357388195|ref|YP_004903034.1|   0.000000000863   42-337   Fucose-specific lectin  
gi|357388738|ref|YP_004903577.1|   3.79e-21   320-560   Fucose-specific lectin  
  0.0000000209   521-688   Fucose-specific lectin  
gi|357390019|ref|YP_004904859.1|   0.0000000000129   280-415   Fucose-specific lectin  
  0.000000000131   118-274   Fucose-specific lectin  
gi|357390020|ref|YP_004904860.1|   0.0000000000288   305-465   Fucose-specific lectin  
  0.000000353   134-343   Fucose-specific lectin  
gi|357390069|ref|YP_004904909.1|   0.0000000000000608   463-687   Fucose-specific lectin  
gi|357390070|ref|YP_004904910.1|   0.00000000693   360-626   Fucose-specific lectin  
gi|357390792|ref|YP_004905633.1|   1.03e-18   247-475   Fucose-specific lectin  
gi|357393817|ref|YP_004908658.1|   4.45e-16   11-141   Fucose-specific lectin  
gi|357393861|ref|YP_004908702.1|   0.000000000379   196-285   Fucose-specific lectin  
 
Weak hits:
gi|357388757|ref|YP_004903596.1|   0.00876   71-194   Fucose-specific lectin  
gi|357391019|ref|YP_004905860.1|   0.0301   155-388   Fucose-specific lectin  

Streptomyces coelicolor A3(2) has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|21218612|ref|NP_624391.1|   3.79e-32   466-732   Fucose-specific lectin  
gi|21224350|ref|NP_630129.1|   2.62e-25   5-292   Fucose-specific lectin  
gi|21224351|ref|NP_630130.1|   4.71e-21   36-324   Fucose-specific lectin  
gi|21224357|ref|NP_630136.1|   9.29e-25   373-645   Fucose-specific lectin  
 
Weak hits:
gi|21220630|ref|NP_626409.1|   0.0222   19-113   Fucose-specific lectin  
gi|21225188|ref|NP_630967.1|   0.0889   308-347   Fucose-specific lectin  

Streptomyces sp. PAMC26508 has 7 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|479321132|ref|YP_007861183.1|   0.00000000000314   481-617   Fucose-specific lectin  
  0.0000000327   351-498   Fucose-specific lectin  
gi|479322266|ref|YP_007862317.1|   0.00000000000051   3-138   Fucose-specific lectin  
gi|479322267|ref|YP_007862318.1|   1.44e-22   191-384   Fucose-specific lectin  
gi|479322270|ref|YP_007862321.1|   1.44e-21   312-550   Fucose-specific lectin  
  0.000000017   172-322   Fucose-specific lectin  
gi|479322477|ref|YP_007862528.1|   0.00000000000051   4-286   Fucose-specific lectin  
 
Weak hits:
gi|479323254|ref|YP_007863305.1|   0.000693   13-116   Fucose-specific lectin  
gi|479323838|ref|YP_007863889.1|   0.000262   50-135   Fucose-specific lectin  

Streptomyces flavogriseus ATCC 33331 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|357410451|ref|YP_004922187.1|   0.000000000000654   4-293   Fucose-specific lectin  
gi|357410686|ref|YP_004922422.1|   4.84e-18   231-412   Fucose-specific lectin  
  0.00000000000536   415-547   Fucose-specific lectin  
gi|357410689|ref|YP_004922425.1|   6.93e-18   278-497   Fucose-specific lectin  
  3.92e-16   187-321   Fucose-specific lectin  
gi|357411739|ref|YP_004923475.1|   0.00000000000379   433-569   Fucose-specific lectin  
  0.0000000497   304-450   Fucose-specific lectin  
 
Weak hits:
gi|357410547|ref|YP_004922283.1|   0.00327   351-460   Fucose-specific lectin  

Streptomyces sp. SirexAA-E has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|345001493|ref|YP_004804347.1|   0.000000000000209   491-684   Fucose-specific lectin  
  0.00471   385-479   Fucose-specific lectin  
gi|345002749|ref|YP_004805603.1|   0.0000000000000915   31-222,266-332   Fucose-specific lectin  
gi|345002753|ref|YP_004805607.1|   0.000000000759   414-624   Fucose-specific lectin  
  0.00379   253-442   Fucose-specific lectin  
gi|345003477|ref|YP_004806331.1|   1.57e-24   443-691   Fucose-specific lectin  
 
Weak hits:
gi|345002858|ref|YP_004805712.1|   0.00288   192-273   Fucose-specific lectin  

Streptomyces griseus subsp. griseus NBRC 13350 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|182435276|ref|YP_001822995.1|   3.14e-19   37-332   Fucose-specific lectin  
 
Weak hits:
gi|182434178|ref|YP_001821897.1|   0.0275   500-619   Fucose-specific lectin  
gi|182434634|ref|YP_001822353.1|   0.011   324-428   Fucose-specific lectin  

Streptomyces bingchenggensis BCW-1 has 10 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|374985857|ref|YP_004961352.1|   2.22e-19   7-304   Fucose-specific lectin  
gi|374988012|ref|YP_004963507.1|   0.0000798   13-128   Fucose-specific lectin  
gi|374988927|ref|YP_004964422.1|   0.0000000000000262   458-671   Fucose-specific lectin  
gi|374991903|ref|YP_004967398.1|   7.85e-17   304-601   Fucose-specific lectin  
gi|374992655|ref|YP_004968150.1|   7.32e-22   291-562   Fucose-specific lectin  
  0.0000000000102   517-659   Fucose-specific lectin  
gi|374992656|ref|YP_004968151.1|   0.000000000000379   106-260   Fucose-specific lectin  
  0.000000000432   339-462   Fucose-specific lectin  
  0.00000000615   247-336   Fucose-specific lectin  
gi|374992657|ref|YP_004968152.1|   4.97e-20   184-361   Fucose-specific lectin  

Streptomyces violaceusniger Tu 4113 has 7 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|345008566|ref|YP_004810920.1|   0.000000000000392   371-602   Fucose-specific lectin  
gi|345009901|ref|YP_004812255.1|   9.02e-31   450-707   Fucose-specific lectin  
gi|345009945|ref|YP_004812299.1|   5.75e-17   8-293   Fucose-specific lectin  
gi|345011851|ref|YP_004814205.1|   2.88e-21   6-205   Fucose-specific lectin  
  0.000000000000196   153-331   Fucose-specific lectin  
gi|345012698|ref|YP_004815052.1|   0.00000000000000275   119-251   Fucose-specific lectin  
gi|345013635|ref|YP_004815989.1|   0.00000000000196   276-499   Fucose-specific lectin  
 
Weak hits:
gi|345014925|ref|YP_004817279.1|   0.000929   326-394   Fucose-specific lectin  
  0.00248   214-379   Fucose-specific lectin  

Streptomyces avermitilis MA-4680 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|29826984|ref|NP_821618.1|   0.00000968   2-56   Fucose-specific lectin  
gi|29827902|ref|NP_822536.1|   8.37e-31   17-308   Fucose-specific lectin  
gi|29828779|ref|NP_823413.1|   3.53e-20   177-483   Fucose-specific lectin  
gi|29828780|ref|NP_823414.1|   1.16e-19   76-374   Fucose-specific lectin  
gi|29831467|ref|NP_826101.1|   0.0000000000000248   372-603   Fucose-specific lectin  
gi|29832448|ref|NP_827082.1|   5.62e-41   288-587   Fucose-specific lectin  
 
Weak hits:
gi|29833271|ref|NP_827905.1|   0.0772   9-117   Fucose-specific lectin  

Streptomyces cattleya NRRL 8057 = DSM 46488 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386355633|ref|YP_006053879.1|   1.96e-17   417-589   Fucose-specific lectin  
  0.0000000111   563-708   Fucose-specific lectin  
 
Weak hits:
gi|386353355|ref|YP_006051602.1|   0.00484   132-278   Fucose-specific lectin  

Streptomyces hygroscopicus subsp. jinggangensis 5008 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386843171|ref|YP_006248229.1|   7.06e-24   5-285   Fucose-specific lectin  
gi|386844502|ref|YP_006249560.1|   1.31e-29   448-711   Fucose-specific lectin  
 
Weak hits:
gi|386837031|ref|YP_006242089.1|   0.0445   84-164   Fucose-specific lectin  
gi|386843394|ref|YP_006248452.1|   0.0262   96-183   Fucose-specific lectin  
gi|386843991|ref|YP_006249049.1|   0.0144   198-313   Fucose-specific lectin  

  1 2 3 4 5 6 7 8 9   Next Last
Showing genomes 1 to 25 of 201

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Select to display   Genome       Domains   Proteins
No Yes ALL   20684 20684
No Yes Saccoglossus kowalevskii v3.0   3 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 3 3
No Yes Adineta vaga   1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Hydra vulgaris   2 1
No Yes Amphimedon queenslandica   1 1
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   39 29
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Hydnomerulius pinastri v2.0   2 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pleurotus ostreatus Oyster mushroom 2 1
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   3 3
No Yes Hebeloma cylindrosporum h7 v2.0   19 18
No Yes Laccaria bicolor S238N-H82   2 2
No Yes Schizophyllum commune   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   3 3
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Postia placenta   1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0   4 4
No Yes Fomitopsis pinicolav1.0   2 2
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   14 12
No Yes Daldinia eschscholzii EC12 v1.0   8 8
No Yes Apiospora montagnei NRRL 25634 v1.0   15 13
No Yes Magnaporthe poae ATCC 64411 22   9 9
No Yes Magnaporthe grisea 70-15   12 12
No Yes Podospora anserina   13 9
No Yes Sporotrichum thermophile ATCC 42464   5 5
No Yes Thielavia terrestris NRRL 8126   7 5
No Yes Chaetomium globosum CBS 148.51   9 9
No Yes Neurospora tetrasperma   2 2
No Yes Neurospora discreta FGSC 8579   2 2
No Yes Neurospora crassa OR74A   2 2
No Yes Cryphonectria parasitica Chestnut blight fungus 5 5
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   7 7
No Yes Nectria haematococca mpVI   8 7
No Yes Fusarium oxysporum f. sp. lycopersici 4286   6 5
No Yes Fusarium verticillioides 7600   6 6
No Yes Trichoderma asperellum CBS 433.97 v1.0   8 8
No Yes Trichoderma atroviride   8 8
No Yes Trichoderma citrinoviride v1.0   5 5
No Yes Trichoderma reesei 1.2   5 5
No Yes Trichoderma virens Gv29-8   9 8
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   5 5
No Yes Trichoderma harzianum CBS 226.95 v1.0   9 9
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   5 5
No Yes Sclerotinia sclerotiorum   6 6
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   2 2
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   2 2
No Yes Cochliobolus victoriae FI3 v1.0   3 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 2
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   4 3
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Coccidioides posadasii RMSCC 3488   3 2
No Yes Coccidioides immitis RS   3 2
No Yes Microsporum canis CBS 113480   5 3
No Yes Trichophyton equinum CBS 127.97   4 2
No Yes Trichophyton verrucosum HKI 0517   6 3
No Yes Arthroderma benhamiae CBS 112371   5 3
No Yes Trichophyton tonsurans CBS 112818   3 2
No Yes Trichophyton rubrum CBS 118892   5 3
No Yes Uncinocarpus reesii 1704   4 3
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 1
No Yes Penicillium chrysogenum v1.0   2 1
No Yes Aspergillus fumigatus Af293   3 3
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus wentii v1.0   8 7
No Yes Aspergillus oryzae RIB40   5 4
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Eucalyptus grandis v201 Rose gum 3 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 3 2
No Yes Gossypium raimondii v221   8 5
No Yes Citrus clementina v165   4 2
No Yes Citrus sinensis v154 Sweet orange 2 1
No Yes Carica papaya Papaya 2 1
No Yes Medicago truncatula Barrel medic 3 2
No Yes Phaseolus vulgaris v186 French bean 4 2
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 2 1
No Yes Fragaria vesca Wild strawberry 2 1
No Yes Malus domestica v196 Apple 2 1
No Yes Prunus persica v139 Peach 2 1
No Yes Linum usitatissimum v200 Flax 4 2
No Yes Manihot esculenta v147 Cassava 3 2
No Yes Populus trichocarpa v156 Black cottonwood 6 3
No Yes Vitis vinifera Wine grape 2 1
No Yes Mimulus guttatus v140 Spotted monkey flower 2 1
No Yes Solanum lycopersicum v.2.3 Tomato 2 1
No Yes Solanum tuberosum Potato 7 6
No Yes Actinidia chinensis Hongyang   4 2
No Yes Aquilegia coerulea v195   2 1
No Yes Triticum urartu 22   3 2
No Yes Triticum aestivum 22 Bread wheat 5 3
No Yes Aegilops tauschii 22   2 1
No Yes Brachypodium distachyon Stiff brome 2 1
No Yes Oryza barthii 22 African wild rice 3 2
No Yes Oryza meridionalis 22   4 2
No Yes Oryza glumaepatula 22   2 1
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   2 1
No Yes Oryza nivara 22   2 1
No Yes Oryza brachyantha 22 Malo sina 3 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 2 1
No Yes Panicum virgatum v202 Switchgrass 3 2
No Yes Setaria italica v164 Foxtail millet 2 1
No Yes Zea mays subsp. mays Maize 3 2
No Yes Zea mays v181 Maize 3 2
No Yes Sorghum bicolor Sorghum 2 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 1
No Yes Amborella trichopoda 22   2 1
No Yes Chlorella variabilis sp. NC64A   6 5
No Yes Ostreococcus tauri   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   3 3
No Yes Cyanophora paradoxa   1 1
No Yes Aureococcus anophagefferens   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Gloeobacter violaceus PCC 7421   3 2
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena sp. 90   2 2
No Yes Conexibacter woesei DSM 14684   4 3
No Yes Modestobacter marinus   1 1
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Catenulispora acidiphila DSM 44928   7 6
No Yes Stackebrandtia nassauensis DSM 44728   9 6
No Yes Frankia symbiont of Datisca glomerata   3 2
No Yes Frankia alni ACN14a   2 2
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   13 10
No Yes Streptomyces coelicolor A3(2)   4 4
No Yes Streptomyces sp. PAMC26508   7 5
No Yes Streptomyces flavogriseus ATCC 33331   7 4
No Yes Streptomyces sp. SirexAA-E   4 4
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   10 7
No Yes Streptomyces violaceusniger Tu 4113   7 6
No Yes Streptomyces avermitilis MA-4680   6 6
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   2 1
No Yes Kribbella flavida DSM 17836   2 1
No Yes Microlunatus phosphovorus NM-1   2 2
No Yes Salinispora arenicola CNS-205   3 3
No Yes Salinispora tropica CNB-440   2 2
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   3 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   2 1
No Yes Arthrobacter aurescens TC1   2 2
No Yes Arthrobacter sp. Rue61a   2 2
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   3 3
No Yes Roseiflexus sp. RS-1   2 1
No Yes Roseiflexus castenholzii DSM 13941   3 2
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Symbiobacterium thermophilum IAM 14863   2 1
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   3 2
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Alkaliphilus oremlandii OhILAs   1 1
No Yes Alkaliphilus metalliredigens QYMF   2 2
No Yes Clostridium sp. BNL1100   1 1
No Yes Clostridium beijerinckii NCIMB 8052   2 1
No Yes Clostridium tetani E88   2 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium botulinum A str. ATCC 3502   3 2
No Yes Clostridium acetobutylicum ATCC 824   2 1
No Yes Mahella australiensis 50-1 BON   2 2
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   3 3
No Yes Niastella koreensis GR20-10   4 1
No Yes Cytophaga hutchinsonii ATCC 33406   4 3
No Yes Solitalea canadensis DSM 3403   2 1
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Treponema denticola ATCC 35405   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella mallensis MP5ACTX8   4 2
No Yes Terriglobus saanensis SP1PR4   3 2
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Bdellovibrio bacteriovorus HD100   2 2
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Sorangium cellulosum 'So ce 56'   6 5
No Yes Stigmatella aurantiaca DW4/3-1   4 4
No Yes Corallococcus coralloides DSM 2259   9 8
No Yes Myxococcus xanthus DK 1622   5 3
No Yes Myxococcus fulvus HW-1   3 2
No Yes Dechlorosoma suillum PS   1 1
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Neisseria gonorrhoeae NCCP11945   2 2
No Yes Thiomonas arsenitoxydans   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia pseudomallei 1106a   2 2
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Bordetella petrii DSM 12804   1 1
No Yes Achromobacter xylosoxidans A8   2 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 1
No Yes Bradyrhizobium japonicum USDA 110   2 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Photorhabdus asymbiotica   4 3
No Yes Photorhabdus luminescens subsp. laumondii TTO1   6 5
No Yes Pseudomonas entomophila L48   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   2 1
No Yes Methanosaeta harundinacea 6Ac   2 1
No Yes Methanosaeta concilii GP6   3 1
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanoregula boonei 6A8   3 2
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   3 2
No Yes Coccidioides immitis RMSCC 3703   2 2
No Yes Coccidioides immitis RMSCC 2394   3 2
No Yes Coccidioides immitis H538.4   3 2
No Yes Aspergillus fumigatus A1163   3 3
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 1
No Yes Hordeum vulgare 22 Domesticated barley 10 8
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 3 2
No Yes Oscillatoria nigro-viridis PCC 7112   2 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   3 2
No Yes Anabaena cylindrica PCC 7122   2 1
No Yes Frankia sp. EuI1c   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   6 5
No Yes Streptomyces davawensis JCM 4913   3 2
No Yes Streptomyces fulvissimus DSM 40593   10 6
No Yes Streptomyces venezuelae ATCC 10712   11 8
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   10 7
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 2
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium tetani genome 12124569   2 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   3 2
No Yes Clostridium botulinum F str. 230613   3 2
No Yes Clostridium botulinum F str. Langeland   3 2
No Yes Clostridium botulinum B1 str. Okra   3 2
No Yes Clostridium botulinum Ba4 str. 657   3 2
No Yes Clostridium botulinum A2 str. Kyoto   3 2
No Yes Clostridium botulinum A3 str. Loch Maree   3 2
No Yes Clostridium botulinum A str. Hall   3 2
No Yes Clostridium botulinum A str. ATCC 19397   3 2
No Yes Clostridium acetobutylicum DSM 1731   2 1
No Yes Clostridium acetobutylicum EA 2018   2 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   2 2
No Yes Geobacter sp. M18   2 1
No Yes Sorangium cellulosum So0157-2   6 5
No Yes Myxococcus stipitatus DSM 14675   8 7
No Yes Neisseria gonorrhoeae TCDC-NG08107   4 2
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   2 2
No Yes Burkholderia pseudomallei NCTC 13179   2 2
No Yes Burkholderia pseudomallei BPC006   2 2
No Yes Burkholderia pseudomallei 1026b   2 2
No Yes Burkholderia pseudomallei MSHR346   2 2
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   2 2
No Yes Burkholderia pseudomallei K96243   2 2
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   2 1
No Yes Methanobacterium sp. SWAN-1   1 1
No Yes Lotus japonicus (Early assembly)   2 1
No Yes Malus x domestica (Duplicate) Apple 2 1
No Yes Ricinus communis (Early assembly) Castor bean 2 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 1
No Yes Phoenix dactylifera (Early draft) Date palm 2 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 3 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   2 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   4 3
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   3 3
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Combined (meta-genome)   3 3
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   8 8
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   13 9
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   5 5
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   8 8
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   19 19
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   7 7
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   10334 8514
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   10 10
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   3 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   6 5
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   17 17
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   31 30
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   20 20
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   19 19
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   24 24
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   269 233
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   11 11
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Uniprot 2018_03 genome   7510 6055
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   13 12
No Yes Global Ocean Sampling Expedition (GOS)   248 226
No Yes NCBI plasmid sequences (Plasmids)   11 11
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   116 105
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   143 134
No Yes TargetDB (Targets)   6 6

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