SUPERFAMILY 1.75 HMM library and genome assignments server

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Baseplate structural protein gp8 superfamily domain assignments
in
PDB chains (SCOP 1.75)

Network of domain occurrence in all genomes


Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
1n7zA   1.54e-153   7-334   Baseplate structural protein gp8  

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View all assignments containing a Baseplate structural protein gp8 domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   3232 3232
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   6 6
No Yes NCBI 2017_08 genome   213 159
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   678 450
No Yes Global Ocean Sampling Expedition (GOS)   1990 1793
No Yes NCBI viral sequences (Viral)   124 88
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   52 52
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   100 88
No Yes UniProt viral sequences (Viral)   36 30

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