SUPERFAMILY 1.75 HMM library and genome assignments server

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CoA-transferase family III (CaiB/BaiF) superfamily domain assignments
in
Candidatus Nitrospira defluvii


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View all assignments containing a CoA-transferase family III (CaiB/BaiF) domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   327810 327810
No Yes Homo sapiens 76_38 Human 12 12
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 2 2
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 2 2
No Yes Macaca mulatta 76_1 Rhesus monkey 5 5
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 4 4
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 4 3
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 3 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 2 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 3 2
No Yes Tupaia belangeri 76 Northern tree shrew 4 2
No Yes Sus scrofa 76_10.2 Pig 3 3
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 2 2
No Yes Vicugna pacos 76_1 Alpaca 2 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 4 4
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 76_1 Large flying fox 3 2
No Yes Sorex araneus 76_1 European shrew 2 2
No Yes Erinaceus europaeus 76 Western European hedgehog 3 2
No Yes Procavia capensis 76_1 Cape rock hyrax 4 2
No Yes Loxodonta africana 76_3 African savanna elephant 2 2
No Yes Echinops telfairi 76 Small Madagascar hedgehog 3 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 4
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 3 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 3 3
No Yes Saccoglossus kowalevskii v3.0   3 3
No Yes Petromyzon marinus 76_7.0 Sea lamprey 3 3
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 4 4
No Yes Anas platyrhynchos 76_1.0 Mallard 3 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 3 3
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 1 1
No Yes Xenopus laevis African clawed frog 5 5
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 1 1
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Gadus morhua 76_1 Atlantic cod 3 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 5 5
No Yes Oryzias latipes 76_1 Japanese medaka 3 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 2 2
No Yes Danio rerio 76_9 Zebrafish 4 4
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 3 3
No Yes Adineta vaga   6 6
No Yes Octopus bimaculoides 280   2 2
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 3 3
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 14 14
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 3 3
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   3 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 2
No Yes Lucilia cuprina Australian sheep blowfly 2 2
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   4 4
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 2 2
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 2 2
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 2
No Yes Pristionchus pacificus   3 3
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   1 1
No Yes Caenorhabditis japonica   5 5
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 3 3
No Yes Caenorhabditis briggsae 2   1 1
No Yes Hymenolepis microstoma   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Mnemiopsis leidyi Sea walnut 2 2
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   2 2
No Yes Proterospongia sp. ATCC 50818   2 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   7 6
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   2 2
No Yes Mortierella verticillata NRRL 6337   3 3
No Yes Phycomyces blakesleeanus   3 3
No Yes Rhizopus oryzae RA 99-880   3 3
No Yes Mucor circinelloides   5 4
No Yes Rhizomucor miehei CAU432   5 4
No Yes Sporisorium reilianum 22   4 3
No Yes Ustilago maydis   4 3
No Yes Mixia osmundae IAM 14324 v1.0   5 4
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   5 4
No Yes Sporobolomyces roseus IAM 13481   2 2
No Yes Microbotryum violaceum 22   5 3
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   5 4
No Yes Piloderma croceum F 1598 v1.0   6 5
No Yes Serpula lacrymans var. lacrymans S7.9   5 4
No Yes Coniophora puteana   4 3
No Yes Hydnomerulius pinastri v2.0   5 4
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   3 3
No Yes Pisolithus microcarpus 441 v1.0   3 3
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   3 3
No Yes Coprinopsis cinerea okayama7 130 v3   5 4
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Amanita thiersii Skay4041 v1.0   5 4
No Yes Amanita muscaria Koide v1.0 Fly agaric 5 4
No Yes Galerina marginata v1.0   7 5
No Yes Hebeloma cylindrosporum h7 v2.0   7 5
No Yes Laccaria bicolor S238N-H82   7 5
No Yes Agaricus bisporus var. bisporus   5 4
No Yes Schizophyllum commune   4 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 4
No Yes Heterobasidion annosum   5 4
No Yes Gloeophyllum trabeumv1.0   7 5
No Yes Punctularia strigosozonata v1.0   4 3
No Yes Sebacina vermifera MAFF 305830 v1.0   4 3
No Yes Fomitiporia mediterranea v1.0   5 4
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Postia placenta   7 5
No Yes Wolfiporia cocos MD-104 SS10 v1.0   4 3
No Yes Fomitopsis pinicolav1.0   4 3
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   4 3
No Yes Phanerochaete chrysosporium RP-78 2.1   5 4
No Yes Dichomitus squalens   4 3
No Yes Trametes versicolor v1.0   5 4
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   7 5
No Yes Apiospora montagnei NRRL 25634 v1.0   10 7
No Yes Magnaporthe poae ATCC 64411 22   5 4
No Yes Magnaporthe grisea 70-15   13 8
No Yes Podospora anserina   6 4
No Yes Sporotrichum thermophile ATCC 42464   4 3
No Yes Thielavia terrestris NRRL 8126   6 4
No Yes Chaetomium globosum CBS 148.51   4 3
No Yes Neurospora tetrasperma   5 3
No Yes Neurospora discreta FGSC 8579   4 3
No Yes Neurospora crassa OR74A   6 4
No Yes Cryphonectria parasitica Chestnut blight fungus 5 4
No Yes Verticillium albo-atrum VaMs.102   8 6
No Yes Verticillium dahliae VdLs.17   8 6
No Yes Acremonium alcalophilumv 1.0   7 5
No Yes Glomerella graminicola 22   11 7
No Yes Fusarium graminearum   10 6
No Yes Nectria haematococca mpVI   21 13
No Yes Fusarium oxysporum f. sp. lycopersici 4286   17 11
No Yes Fusarium verticillioides 7600   16 10
No Yes Trichoderma asperellum CBS 433.97 v1.0   16 10
No Yes Trichoderma atroviride   13 8
No Yes Trichoderma citrinoviride v1.0   6 4
No Yes Trichoderma reesei 1.2   6 4
No Yes Trichoderma virens Gv29-8   13 8
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   11 7
No Yes Amorphotheca resinae v1.0 Creosote fungus 6 4
No Yes Botrytis cinerea B05.10   5 4
No Yes Sclerotinia sclerotiorum   4 3
No Yes Didymella exigua CBS 183.55 v1.0   10 6
No Yes Leptosphaeria maculans 22   5 4
No Yes Setosphaeria turcica v1.0   15 9
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   14 9
No Yes Cochliobolus victoriae FI3 v1.0   18 12
No Yes Cochliobolus carbonum 26-R-13 v1.0   16 11
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 14 9
No Yes Alternaria brassicicola   7 6
No Yes Cochliobolus lunatus m118 v2.0   9 6
No Yes Pyrenophora teres f. teres 22   5 4
No Yes Pyrenophora tritici-repentis   6 4
No Yes Stagonospora nodorum   11 7
No Yes Mycosphaerella graminicola IPO323   6 5
No Yes Zasmidium cellare ATCC 36951 v1.0   23 14
No Yes Dothistroma septosporum   10 8
No Yes Septoria musiva v1.0   2 2
No Yes Mycosphaerella fijiensis CIRAD86   8 6
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   8 5
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   9 6
No Yes Coccidioides immitis RS   9 6
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   2 2
No Yes Microsporum canis CBS 113480   2 2
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   2 2
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Uncinocarpus reesii 1704   6 5
No Yes Aspergillus zonatus v1.0   6 4
No Yes Penicillium chrysogenum Wisconsin 54-1255   8 6
No Yes Penicillium chrysogenum v1.0   8 6
No Yes Aspergillus acidus v1.0   15 9
No Yes Aspergillus fumigatus Af293   7 5
No Yes Aspergillus brasiliensis v1.0   17 10
No Yes Aspergillus nidulans FGSC A4   9 6
No Yes Aspergillus sydowii v1.0   19 13
No Yes Aspergillus versicolor v1.0   19 13
No Yes Aspergillus glaucus   9 6
No Yes Aspergillus carbonarius ITEM 5010   11 7
No Yes Neosartorya fischeri NRRL 181   7 5
No Yes Aspergillus terreus NIH2624   10 7
No Yes Aspergillus tubingensis v1.0   15 9
No Yes Aspergillus wentii v1.0   18 12
No Yes Aspergillus oryzae RIB40   16 10
No Yes Aspergillus niger 22   16 10
No Yes Aspergillus niger ATCC 1015   12 7
No Yes Aspergillus flavus NRRL3357   15 9
No Yes Aspergillus clavatus NRRL 1   7 5
No Yes Penicillium marneffei ATCC 18224   8 6
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Candida dubliniensis CD36   2 1
No Yes Candida tropicalis MYA-3404   2 1
No Yes Candida albicans SC5314   2 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   6 3
No Yes Pichia stipitis CBS 6054   2 1
No Yes Debaromyces hansenii   2 1
No Yes Wickerhamomyces anomalus   2 1
No Yes Yarrowia lipolytica CLIB122   4 3
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   3 2
No Yes Dictyostelium discoideum   2 1
No Yes Dictyostelium purpureum   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Aureococcus anophagefferens   2 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   6 5
No Yes Paramecium tetraurelia   3 3
No Yes Tetrahymena thermophila SB210 1   2 2
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Symbiodinium minutum clade B1 v1.2   11 10
No Yes Naegleria gruberi   4 3
No Yes Emiliania huxleyi CCMP1516   9 5
No Yes Conexibacter woesei DSM 14684   8 8
No Yes Cryptobacterium curtum DSM 15641   1 1
No Yes Eggerthella sp. YY7918   13 13
No Yes Eggerthella lenta DSM 2243   6 6
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Rubrobacter xylanophilus DSM 9941   7 7
No Yes Ilumatobacter coccineus   10 9
No Yes Acidimicrobium ferrooxidans DSM 10331   3 3
No Yes Thermobispora bispora DSM 43833   6 5
No Yes Nakamurella multipartita DSM 44233   4 4
No Yes Modestobacter marinus   4 4
No Yes Blastococcus saxobsidens DD2   8 7
No Yes Geodermatophilus obscurus DSM 43160   3 3
No Yes Kineococcus radiotolerans SRS30216   2 1
No Yes Catenulispora acidiphila DSM 44928   6 5
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Frankia symbiont of Datisca glomerata   3 3
No Yes Frankia sp. EAN1pec   41 36
No Yes Frankia alni ACN14a   36 26
No Yes Thermobifida fusca YX   5 5
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   8 7
No Yes Thermomonospora curvata DSM 43183   4 4
No Yes Streptosporangium roseum DSM 43021   11 9
No Yes Kitasatospora setae KM-6054   3 2
No Yes Streptomyces coelicolor A3(2)   6 6
No Yes Streptomyces sp. PAMC26508   3 3
No Yes Streptomyces flavogriseus ATCC 33331   3 3
No Yes Streptomyces sp. SirexAA-E   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   8 7
No Yes Streptomyces violaceusniger Tu 4113   9 7
No Yes Streptomyces avermitilis MA-4680   7 6
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   6 6
No Yes Streptomyces scabiei 87.22   8 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   7 6
No Yes Actinosynnema mirum DSM 43827   4 3
No Yes Saccharomonospora viridis DSM 43017   5 4
No Yes Pseudonocardia dioxanivorans CB1190   38 35
No Yes Saccharopolyspora erythraea NRRL 2338   15 12
No Yes Amycolatopsis mediterranei U32   18 15
No Yes Kribbella flavida DSM 17836   7 6
No Yes Nocardioides sp. JS614   11 11
No Yes Propionibacterium acnes SK137   1 1
No Yes Microlunatus phosphovorus NM-1   5 4
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   2 2
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   2 2
No Yes Verrucosispora maris AB-18-032   3 3
No Yes Micromonospora sp. L5   5 5
No Yes Micromonospora aurantiaca ATCC 27029   7 7
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   5 5
No Yes Segniliparus rotundus DSM 44985   3 2
No Yes Tsukamurella paurometabola DSM 20162   6 4
No Yes Gordonia sp. KTR9   14 12
No Yes Gordonia polyisoprenivorans VH2   15 11
No Yes Gordonia bronchialis DSM 43247   6 6
No Yes Rhodococcus jostii RHA1   32 30
No Yes Rhodococcus equi 103S   13 9
No Yes Rhodococcus opacus B4   52 49
No Yes Rhodococcus erythropolis PR4   19 18
No Yes Nocardia cyriacigeorgica GUH-2   4 3
No Yes Nocardia farcinica IFM 10152   6 5
No Yes Amycolicicoccus subflavus DQS3-9A1   5 4
No Yes Mycobacterium massiliense str. GO 06   6 6
No Yes Mycobacterium abscessus ATCC 19977   8 6
No Yes Mycobacterium sp. JLS   22 19
No Yes Mycobacterium intracellulare ATCC 13950   34 27
No Yes Mycobacterium avium 104   40 31
No Yes Mycobacterium vanbaalenii PYR-1   17 15
No Yes Mycobacterium canettii CIPT 140010059   5 4
No Yes Mycobacterium africanum GM041182   5 4
No Yes Mycobacterium tuberculosis KZN 1435   5 4
No Yes Mycobacterium tuberculosis   5 4
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   5 4
No Yes Mycobacterium rhodesiae NBB3   35 28
No Yes Mycobacterium ulcerans Agy99   10 9
No Yes Mycobacterium gilvum PYR-GCK   18 16
No Yes Mycobacterium chubuense NBB4   20 16
No Yes Mycobacterium marinum M   16 13
No Yes Mycobacterium smegmatis str. MC2 155   32 29
No Yes Corynebacterium resistens DSM 45100   1 1
No Yes Corynebacterium aurimucosum ATCC 700975   1 1
No Yes Corynebacterium efficiens YS-314   2 2
No Yes Corynebacterium urealyticum DSM 7109   1 1
No Yes Corynebacterium jeikeium K411   2 2
No Yes Corynebacterium variabile DSM 44702   2 2
No Yes Corynebacterium pseudotuberculosis 316   1 1
No Yes Kytococcus sedentarius DSM 20547   3 2
No Yes Microbacterium testaceum StLB037   2 2
No Yes Intrasporangium calvum DSM 43043   4 4
No Yes Xylanimonas cellulosilytica DSM 15894   2 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   5 4
No Yes Arthrobacter aurescens TC1   5 4
No Yes Arthrobacter arilaitensis Re117   3 2
No Yes Kocuria rhizophila DC2201   2 2
No Yes Arthrobacter sp. Rue61a   5 5
No Yes Arthrobacter sp. FB24   2 2
No Yes Renibacterium salmoninarum ATCC 33209   5 5
No Yes Micrococcus luteus NCTC 2665   2 2
No Yes Bifidobacterium animalis subsp. lactis Bl-04   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   2 2
No Yes Thermomicrobium roseum DSM 5159   2 2
No Yes Sphaerobacter thermophilus DSM 20745   6 6
No Yes Herpetosiphon aurantiacus DSM 785   3 3
No Yes Roseiflexus sp. RS-1   6 6
No Yes Roseiflexus castenholzii DSM 13941   8 8
No Yes Chloroflexus sp. MS-G   8 8
No Yes Chloroflexus sp. Y-400-fl   6 6
No Yes Chloroflexus aggregans DSM 9485   6 6
No Yes Chloroflexus aurantiacus J-10-fl   6 6
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   2 2
No Yes Oceanithermus profundus DSM 14977   2 2
No Yes Marinithermus hydrothermalis DSM 14884   2 2
No Yes Meiothermus silvanus DSM 9946   2 2
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   2 2
No Yes Thermus scotoductus SA-01   2 2
No Yes Thermus thermophilus HB27   2 2
No Yes Acidaminococcus intestini RyC-MR95   1 1
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   1 1
No Yes Thermaerobacter marianensis DSM 12885   3 3
No Yes Sulfobacillus acidophilus DSM 10332   4 4
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes Desulfosporosinus acidiphilus SJ4   2 2
No Yes Desulfosporosinus orientis DSM 765   6 6
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   8 8
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum reducens MI-1   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium difficile 630   3 3
No Yes Clostridium saccharolyticum WM1   3 3
No Yes Roseburia hominis A2-183   2 2
No Yes Syntrophothermus lipocalidus DSM 12680   5 5
No Yes Alkaliphilus oremlandii OhILAs   2 2
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   2 2
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Aerococcus urinae ACS-120-V-Col10a   2 2
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus amylovorus GRL1118   2 2
No Yes Lactobacillus reuteri DSM 20016   2 2
No Yes Lactobacillus gasseri ATCC 33323   2 2
No Yes Lactobacillus acidophilus 30SC   2 2
No Yes Kyrpidia tusciae DSM 2912   6 6
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus terrae HPL-003   2 1
No Yes Solibacillus silvestris StLB046   4 4
No Yes Geobacillus thermoglucosidasius C56-YS93   2 2
No Yes Lysinibacillus sphaericus C3-41   2 2
No Yes Oceanobacillus iheyensis HTE831   3 3
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   4 4
No Yes Geobacillus kaustophilus HTA426   2 2
No Yes Geobacillus sp. GHH01   4 4
No Yes Geobacillus sp. WCH70   2 2
No Yes Geobacillus thermodenitrificans NG80-2   3 3
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus sp. 1NLA3E   4 4
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus megaterium DSM 319   3 2
No Yes Bacillus coagulans 2-6   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Gemmatimonas aurantiaca T-27   2 2
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Saprospira grandis str. Lewin   1 1
No Yes Niastella koreensis GR20-10   2 2
No Yes Salinibacter ruber M8   1 1
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Fibrella aestuarina   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Pedobacter saltans DSM 12145   2 2
No Yes Pedobacter heparinus DSM 2366   2 2
No Yes Sphingobacterium sp. 21   2 2
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Flavobacterium johnsoniae UW101   2 2
No Yes Coraliomargarita akajimensis DSM 45221   2 2
No Yes Fretibacterium fastidiosum   1 1
No Yes Thermovirga lienii DSM 17291   2 2
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Thermanaerovibrio acidaminovorans DSM 6589   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Granulicella tundricola MP5ACTX9   2 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfobacca acetoxidans DSM 11109   2 2
No Yes Desulfomonile tiedjei DSM 6799   3 3
No Yes Syntrophobacter fumaroxidans MPOB   6 6
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfobacterium autotrophicum HRM2   2 2
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfovibrio magneticus RS-1   2 2
No Yes Geobacter daltonii FRC-32   2 2
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Geobacter metallireducens GS-15   3 3
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Dechloromonas aromatica RCB   2 2
No Yes Thauera sp. MZ1T   3 3
No Yes Azoarcus sp. KH32C   6 6
No Yes Azoarcus sp. BH72   2 2
No Yes Aromatoleum aromaticum EbN1   9 9
No Yes Dechlorosoma suillum PS   2 2
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Chromobacterium violaceum ATCC 12472   3 2
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   6 6
No Yes beta proteobacterium CB   9 9
No Yes Methylibium petroleiphilum PM1   4 4
No Yes Thiomonas arsenitoxydans   2 2
No Yes Thiomonas intermedia K12   2 2
No Yes Rubrivivax gelatinosus IL144   3 3
No Yes Leptothrix cholodnii SP-6   7 7
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   17 16
No Yes Burkholderia phymatum STM815   16 14
No Yes Burkholderia xenovorans LB400   31 29
No Yes Ralstonia eutropha JMP134   41 39
No Yes Cupriavidus taiwanensis LMG 19424   29 27
No Yes Cupriavidus metallidurans CH34   40 38
No Yes Cupriavidus necator N-1   55 53
No Yes Ralstonia eutropha H16   49 48
No Yes Ralstonia pickettii 12D   8 7
No Yes Ralstonia solanacearum CFBP2957   6 5
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   6 6
No Yes Burkholderia sp. RPE64   14 13
No Yes Burkholderia sp. CCGE1002   17 16
No Yes Burkholderia thailandensis E264   9 8
No Yes Burkholderia pseudomallei 1106a   8 7
No Yes Burkholderia mallei SAVP1   8 7
No Yes Burkholderia ambifaria AMMD   17 15
No Yes Burkholderia cenocepacia HI2424   14 13
No Yes Burkholderia multivorans ATCC 17616   10 9
No Yes Burkholderia vietnamiensis G4   8 7
No Yes Burkholderia gladioli BSR3   13 11
No Yes Burkholderia glumae BGR1   6 5
No Yes Verminephrobacter eiseniae EF01-2   29 29
No Yes Alicycliphilus denitrificans K601   45 45
No Yes Ramlibacter tataouinensis TTB310   13 13
No Yes Delftia sp. Cs1-4   26 25
No Yes Delftia acidovorans SPH-1   25 24
No Yes Polaromonas sp. JS666   19 19
No Yes Polaromonas naphthalenivorans CJ2   8 8
No Yes Variovorax paradoxus S110   26 25
No Yes Rhodoferax ferrireducens T118   10 10
No Yes Acidovorax ebreus TPSY   8 8
No Yes Acidovorax sp. KKS102   7 7
No Yes Acidovorax sp. JS42   10 10
No Yes Acidovorax citrulli AAC00-1   8 8
No Yes Acidovorax avenae subsp. avenae ATCC 19860   10 9
No Yes Comamonas testosteroni CNB-2   13 13
No Yes Herminiimonas arsenicoxydans   4 4
No Yes Collimonas fungivorans Ter331   6 5
No Yes Janthinobacterium sp. Marseille   5 5
No Yes Herbaspirillum seropedicae SmR1   4 3
No Yes Pusillimonas sp. T7-7   18 18
No Yes Advenella kashmirensis WT001   28 26
No Yes Taylorella asinigenitalis MCE3   1 1
No Yes Taylorella equigenitalis MCE9   1 1
No Yes Bordetella petrii DSM 12804   42 41
No Yes Bordetella avium 197N   7 6
No Yes Bordetella pertussis Tohama I   18 17
No Yes Bordetella parapertussis 12822   36 36
No Yes Bordetella bronchiseptica RB50   57 56
No Yes Achromobacter xylosoxidans A8   54 53
No Yes Achromobacter xylosoxidans   23 21
No Yes Nitrosospira multiformis ATCC 25196   2 1
No Yes Nitrosomonas sp. Is79A3   2 1
No Yes Nitrosomonas europaea ATCC 19718   2 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   3 3
No Yes Caulobacter sp. K31   6 6
No Yes Caulobacter crescentus NA1000   3 3
No Yes Caulobacter segnis ATCC 21756   4 4
No Yes Phenylobacterium zucineum HLK1   10 10
No Yes Erythrobacter litoralis HTCC2594   6 6
No Yes Sphingopyxis alaskensis RB2256   9 8
No Yes Novosphingobium sp. PP1Y   11 11
No Yes Novosphingobium aromaticivorans DSM 12444   7 7
No Yes Sphingobium sp. SYK-6   1 1
No Yes Sphingobium japonicum UT26S   5 4
No Yes Sphingobium chlorophenolicum L-1   17 15
No Yes Sphingomonas sp. MM-1   9 7
No Yes Sphingomonas wittichii RW1   15 15
No Yes Maricaulis maris MCS10   2 2
No Yes Hirschia baltica ATCC 49814   4 4
No Yes Hyphomonas neptunium ATCC 15444   7 7
No Yes Dinoroseobacter shibae DFL 12   8 7
No Yes Phaeobacter gallaeciensis 2.10   6 5
No Yes Pseudovibrio sp. FO-BEG1   6 5
No Yes Jannaschia sp. CCS1   5 5
No Yes Ruegeria sp. TM1040   7 6
No Yes Ruegeria pomeroyi DSS-3   9 7
No Yes Roseobacter litoralis Och 149   3 3
No Yes Roseobacter denitrificans OCh 114   2 2
No Yes Rhodobacter sphaeroides ATCC 17029   2 2
No Yes Rhodobacter capsulatus SB 1003   2 2
No Yes Paracoccus denitrificans PD1222   9 9
No Yes Rhodospirillum photometricum DSM 122   2 2
No Yes Tistrella mobilis KA081020-065   14 14
No Yes Magnetospirillum magneticum AMB-1   8 7
No Yes Rhodospirillum centenum SW   2 2
No Yes Rhodospirillum rubrum F11   3 3
No Yes Azospirillum lipoferum 4B   5 5
No Yes Azospirillum sp. B510   7 6
No Yes Azospirillum brasilense Sp245   11 11
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   4 4
No Yes Acidiphilium cryptum JF-5   5 5
No Yes Acetobacter pasteurianus IFO 3283-01   2 2
No Yes Polymorphum gilvum SL003B-26A1   7 7
No Yes Micavibrio aeruginosavorus ARL-13   1 1
No Yes Candidatus Puniceispirillum marinum IMCC1322   2 2
No Yes alpha proteobacterium HIMB59   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   2 2
No Yes Starkeya novella DSM 506   9 9
No Yes Xanthobacter autotrophicus Py2   6 6
No Yes Azorhizobium caulinodans ORS 571   10 9
No Yes Methylobacterium chloromethanicum CM4   3 3
No Yes Methylobacterium extorquens AM1   3 3
No Yes Methylobacterium sp. 4-46   11 10
No Yes Methylobacterium populi BJ001   3 3
No Yes Methylobacterium nodulans ORS 2060   14 14
No Yes Methylobacterium radiotolerans JCM 2831   10 9
No Yes Parvibaculum lavamentivorans DS-1   6 6
No Yes Ochrobactrum anthropi ATCC 49188   2 2
No Yes Brucella microti CCM 4915   4 4
No Yes Brucella pinnipedialis B2/94   3 3
No Yes Brucella canis ATCC 23365   4 4
No Yes Brucella suis ATCC 23445   4 4
No Yes Brucella melitensis ATCC 23457   4 4
No Yes Brucella ovis ATCC 25840   3 3
No Yes Brucella abortus S19   3 3
No Yes Sinorhizobium fredii NGR234   3 2
No Yes Sinorhizobium medicae WSM419   3 3
No Yes Sinorhizobium meliloti AK83   2 2
No Yes Genome sequence of Rhizobium sp. strain IRBG74   4 4
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   2 2
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   4 4
No Yes Agrobacterium sp. H13-3   3 2
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   8 8
No Yes Mesorhizobium opportunistum WSM2075   6 6
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   7 7
No Yes Mesorhizobium loti MAFF303099   5 5
No Yes Beijerinckia indica subsp. indica ATCC 9039   2 2
No Yes Pelagibacterium halotolerans B2   4 4
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   2 2
No Yes Oligotropha carboxidovorans OM4   6 6
No Yes Rhodopseudomonas palustris BisA53   6 6
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   22 21
No Yes Bradyrhizobium sp. ORS 278   11 11
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Colwellia psychrerythraea 34H   4 4
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   4 4
No Yes Glaciecola nitratireducens FR1064   2 2
No Yes Marinobacter adhaerens HP15   3 3
No Yes Marinobacter sp. BSs20148   3 2
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   2 2
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Hahella chejuensis KCTC 2396   3 2
No Yes Alcanivorax borkumensis SK2   2 2
No Yes Marinomonas posidonica IVIA-Po-181   3 2
No Yes Marinomonas sp. MWYL1   3 2
No Yes Marinomonas mediterranea MMB-1   2 1
No Yes Chromohalobacter salexigens DSM 3043   1 1
No Yes Halomonas elongata DSM 2581   2 2
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes gamma proteobacterium HdN1   3 3
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Providencia stuartii MRSN 2154   3 3
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   3 3
No Yes Edwardsiella tarda EIB202   2 2
No Yes Rahnella sp. Y9602   3 2
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 2
No Yes Serratia sp. AS12   2 1
No Yes Serratia plymuthica AS9   2 1
No Yes Serratia proteamaculans 568   2 1
No Yes Dickeya dadantii Ech703   2 2
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea sp. At-9b   2 1
No Yes Pantoea vagans C9-1   2 1
No Yes Pantoea ananatis LMG 20103   2 1
No Yes Erwinia billingiae Eb661   2 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   2 2
No Yes Shigella flexneri 5 str. 8401   3 3
No Yes Shigella dysenteriae Sd197   3 3
No Yes Shigella boydii CDC 3083-94   2 2
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   2 2
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Azotobacter vinelandii DJ   2 2
No Yes Pseudomonas sp. TKP   7 6
No Yes Pseudomonas sp. UW4   8 7
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   5 4
No Yes Pseudomonas entomophila L48   4 3
No Yes Pseudomonas syringae pv. tomato str. DC3000   2 2
No Yes Pseudomonas stutzeri A1501   5 5
No Yes Pseudomonas fulva 12-X   4 4
No Yes Pseudomonas putida F1   4 4
No Yes Pseudomonas protegens Pf-5   7 6
No Yes Pseudomonas fluorescens SBW25   7 6
No Yes Pseudomonas mendocina ymp   3 3
No Yes Pseudomonas aeruginosa UCBPP-PA14   5 5
No Yes Pseudomonas sp. VLB120   3 3
No Yes Psychrobacter sp. G   2 2
No Yes Psychrobacter sp. PRwf-1   2 2
No Yes Psychrobacter arcticus 273-4   2 2
No Yes Psychrobacter cryohalolentis K5   2 2
No Yes Acinetobacter oleivorans DR1   5 5
No Yes Acinetobacter calcoaceticus PHEA-2   5 5
No Yes Acinetobacter baumannii ATCC 17978   2 2
No Yes Acinetobacter sp. ADP1   4 4
No Yes Cycloclasticus sp. P1   3 3
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Acidilobus saccharovorans 345-15   1 1
No Yes Thermosphaera aggregans DSM 11486   1 1
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus kamchatkensis 1221n   1 1
No Yes Desulfurococcus mucosus DSM 2162   1 1
No Yes Sulfolobus tokodaii str. 7   2 2
No Yes Sulfolobus islandicus Y.N.15.51   3 3
No Yes Sulfolobus solfataricus P2   2 2
No Yes Sulfolobus acidocaldarius DSM 639   2 2
No Yes Vulcanisaeta moutnovskia 768-28   2 2
No Yes Vulcanisaeta distributa DSM 14429   2 2
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Pyrobaculum sp. 1860   4 4
No Yes Pyrobaculum calidifontis JCM 11548   2 2
No Yes Pyrobaculum arsenaticum DSM 13514   4 4
No Yes Pyrobaculum oguniense TE7   3 3
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Pyrobaculum islandicum DSM 4184   2 2
No Yes Thermoproteus uzoniensis 768-20   5 5
No Yes Thermoproteus tenax Kra 1   5 5
No Yes halophilic archaeon DL31   3 3
No Yes Ferroglobus placidus DSM 10642   9 9
No Yes Archaeoglobus fulgidus DSM 4304   5 5
No Yes Thermoplasma volcanium GSS1   2 2
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   3 3
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrinema sp. J7-2   3 3
No Yes Natrialba magadii ATCC 43099   6 6
No Yes Halorubrum lacusprofundi ATCC 49239   3 3
No Yes Haloquadratum walsbyi DSM 16790   2 2
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Haloferax volcanii DS2   2 2
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Natronomonas pharaonis DSM 2160   2 2
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   5 5
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 13 13
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 2 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 6 6
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 3 3
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   3 3
No Yes Paracoccidioides brasiliensis Pb01   4 4
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   9 6
No Yes Coccidioides immitis RMSCC 3703   6 6
No Yes Coccidioides immitis RMSCC 2394   8 6
No Yes Coccidioides immitis H538.4   8 6
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   2 2
No Yes Histoplasma capsulatum H88   2 2
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   7 5
No Yes Candida albicans WO-1   2 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 3 3
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   2 2
No Yes Frankia sp. EuI1c   63 49
No Yes Frankia sp. CcI3   4 3
No Yes Nocardiopsis alba ATCC BAA-2165   7 5
No Yes Streptomyces albus J1074   6 5
No Yes Streptomyces rapamycinicus NRRL 5491   20 17
No Yes Streptomyces davawensis JCM 4913   6 5
No Yes Streptomyces fulvissimus DSM 40593   5 4
No Yes Streptomyces venezuelae ATCC 10712   9 7
No Yes Streptomyces collinus Tu 365   5 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   6 6
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   7 6
No Yes Saccharothrix espanaensis DSM 44229   9 7
No Yes Amycolatopsis mediterranei RB   18 15
No Yes Amycolatopsis mediterranei S699   18 15
No Yes Amycolatopsis mediterranei S699   18 15
No Yes Amycolatopsis orientalis HCCB10007   12 9
No Yes Propionibacterium acnes ATCC 11828   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   1 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus pyridinivorans SB3094   16 14
No Yes Rhodococcus erythropolis CCM2595   16 15
No Yes Nocardia brasiliensis ATCC 700358   5 4
No Yes Mycobacterium sp. MOTT36Y   29 23
No Yes Mycobacterium sp. JDM601   19 15
No Yes Mycobacterium abscessus subsp. bolletii 50594   5 4
No Yes Mycobacterium liflandii 128FXT   15 13
No Yes Mycobacterium sp. KMS   17 15
No Yes Mycobacterium sp. MCS   16 14
No Yes Mycobacterium yongonense 05-1390   28 22
No Yes Mycobacterium intracellulare MOTT-64   36 29
No Yes Mycobacterium indicus pranii MTCC 9506   29 23
No Yes Mycobacterium intracellulare MOTT-02   33 26
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   23 18
No Yes Mycobacterium avium subsp. paratuberculosis K-10   25 20
No Yes Mycobacterium canettii CIPT 140070017   4 3
No Yes Mycobacterium canettii CIPT 140060008   5 4
No Yes Mycobacterium canettii CIPT 140070008   5 4
No Yes Mycobacterium canettii CIPT 140070010   5 4
No Yes Mycobacterium tuberculosis EAI5/NITR206   5 4
No Yes Mycobacterium tuberculosis EAI5   5 4
No Yes Mycobacterium tuberculosis CAS/NITR204   7 7
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   5 4
No Yes Mycobacterium tuberculosis UT205   5 4
No Yes Mycobacterium tuberculosis RGTB423   5 4
No Yes Mycobacterium tuberculosis RGTB327   4 3
No Yes Mycobacterium tuberculosis CTRI-2   5 4
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   5 4
No Yes Mycobacterium tuberculosis KZN 605   5 4
No Yes Mycobacterium tuberculosis KZN 4207   5 4
No Yes Mycobacterium tuberculosis CCDC5180   5 4
No Yes Mycobacterium tuberculosis CCDC5079   5 4
No Yes Mycobacterium tuberculosis CCDC5079   5 4
No Yes Mycobacterium tuberculosis H37Ra   5 4
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   3 3
No Yes Mycobacterium tuberculosis str. Haarlem   5 4
No Yes Mycobacterium tuberculosis F11   5 4
No Yes Mycobacterium tuberculosis H37Rv   5 4
No Yes Mycobacterium tuberculosis CDC1551   5 4
No Yes Mycobacterium bovis AF2122/97   5 4
No Yes Mycobacterium bovis BCG str. Korea 1168P   5 4
No Yes Mycobacterium bovis BCG str. Mexico   5 4
No Yes Mycobacterium bovis BCG str. Tokyo 172   5 4
No Yes Mycobacterium gilvum Spyr1   17 15
No Yes Mycobacterium smegmatis str. MC2 155   32 29
No Yes Mycobacterium kansasii ATCC 12478   19 16
No Yes Corynebacterium maris DSM 45190   1 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   1 1
No Yes Corynebacterium terpenotabidum Y-11   2 2
No Yes Corynebacterium urealyticum DSM 7111   2 1
No Yes Corynebacterium argentoratense DSM 44202   1 1
No Yes Corynebacterium pseudotuberculosis 258   1 1
No Yes Corynebacterium pseudotuberculosis Cp162   1 1
No Yes Corynebacterium pseudotuberculosis P54B96   1 1
No Yes Corynebacterium pseudotuberculosis 267   1 1
No Yes Corynebacterium pseudotuberculosis 1/06-A   1 1
No Yes Corynebacterium pseudotuberculosis 42/02-A   1 1
No Yes Corynebacterium pseudotuberculosis 3/99-5   1 1
No Yes Corynebacterium pseudotuberculosis 31   1 1
No Yes Corynebacterium pseudotuberculosis CIP 52.97   1 1
No Yes Corynebacterium pseudotuberculosis PAT10   1 1
No Yes Corynebacterium pseudotuberculosis I19   1 1
No Yes Corynebacterium pseudotuberculosis FRC41   1 1
No Yes Corynebacterium pseudotuberculosis C231   1 1
No Yes Corynebacterium pseudotuberculosis 1002   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl12   1 1
No Yes Bifidobacterium animalis subsp. lactis B420   1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   1 1
No Yes Bifidobacterium animalis subsp. lactis BLC1   1 1
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   1 1
No Yes Bifidobacterium animalis subsp. lactis Bi-07   1 1
No Yes Bifidobacterium animalis subsp. lactis V9   1 1
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   1 1
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Thermus oshimai JL-2   2 2
No Yes Thermus thermophilus JL-18   2 2
No Yes Thermus thermophilus SG0.5JP17-16   1 1
No Yes Thermus thermophilus HB8   2 2
No Yes Faecalibacterium prausnitzii L2-6   2 2
No Yes Sulfobacillus acidophilus TPY   4 4
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium hafniense DCB-2   7 7
No Yes Desulfotomaculum gibsoniae DSM 7213   5 5
No Yes Clostridium difficile BI1   3 3
No Yes Clostridium difficile R20291   3 3
No Yes Clostridium difficile CD196   3 3
No Yes Coprococcus catus GD/7   2 2
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum BKT015925   2 2
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum B1 str. Okra   2 2
No Yes Clostridium botulinum Ba4 str. 657   2 2
No Yes Clostridium botulinum A2 str. Kyoto   2 2
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   2 2
No Yes Clostridium botulinum A str. ATCC 19397   2 2
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   2 2
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus amylovorus GRL 1112   2 2
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus reuteri I5007   1 1
No Yes Lactobacillus reuteri JCM 1112   1 1
No Yes Lactobacillus helveticus R0052   2 2
No Yes Lactobacillus helveticus H10   2 2
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus acidophilus La-14   2 2
No Yes Lactobacillus acidophilus NCFM   2 2
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Geobacillus sp. C56-T3   3 3
No Yes Geobacillus sp. Y4.1MC1   2 2
No Yes Geobacillus sp. Y412MC52   3 3
No Yes Geobacillus sp. Y412MC61   3 3
No Yes Bacillus megaterium WSH-002   4 3
No Yes Bacillus megaterium QM B1551   3 2
No Yes Bacillus coagulans 36D1   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   1 1
No Yes Echinicola vietnamensis DSM 17526   2 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Campylobacter coli 15-537360   1 1
No Yes Campylobacter coli CVM N29710   1 1
No Yes Desulfobacula toluolica Tol2   4 4
No Yes Geobacter sp. M18   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia phenoliruptrix BR3459a   13 12
No Yes Pandoraea pnomenusa 3kgm   13 12
No Yes Ralstonia pickettii 12J   9 8
No Yes Ralstonia solanacearum FQY_4   6 5
No Yes Ralstonia solanacearum Po82   8 6
No Yes Ralstonia solanacearum PSI07   8 6
No Yes Ralstonia solanacearum CMR15   6 5
No Yes Ralstonia solanacearum GMI1000   6 5
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   3 3
No Yes Burkholderia sp. YI23   39 37
No Yes Burkholderia sp. CCGE1003   15 14
No Yes Burkholderia sp. CCGE1001   12 11
No Yes Burkholderia sp. KJ006   7 6
No Yes Burkholderia thailandensis MSMB121   13 11
No Yes Burkholderia pseudomallei MSHR305   11 10
No Yes Burkholderia pseudomallei NCTC 13179   11 10
No Yes Burkholderia pseudomallei BPC006   8 7
No Yes Burkholderia pseudomallei 1026b   9 8
No Yes Burkholderia pseudomallei MSHR346   5 5
No Yes Burkholderia pseudomallei 668   9 8
No Yes Burkholderia pseudomallei 1710b   9 8
No Yes Burkholderia pseudomallei K96243   9 8
No Yes Burkholderia mallei NCTC 10229   8 7
No Yes Burkholderia mallei NCTC 10247   7 6
No Yes Burkholderia mallei ATCC 23344   6 5
No Yes Burkholderia lata   33 31
No Yes Burkholderia ambifaria MC40-6   16 14
No Yes Burkholderia cenocepacia MC0-3   19 18
No Yes Burkholderia cenocepacia AU 1054   14 13
No Yes Burkholderia cenocepacia J2315   16 15
No Yes Burkholderia multivorans ATCC 17616   10 9
No Yes Burkholderia cepacia GG4   11 10
No Yes Alicycliphilus denitrificans BC   43 43
No Yes Variovorax paradoxus B4   28 27
No Yes Variovorax paradoxus EPS   16 16
No Yes Taylorella asinigenitalis 14/45   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Taylorella equigenitalis ATCC 35865   1 1
No Yes Bordetella pertussis CS   22 21
No Yes Bordetella parapertussis 18323   17 17
No Yes Bordetella parapertussis Bpp5   35 34
No Yes Bordetella bronchiseptica MO149   55 54
No Yes Bordetella bronchiseptica 253   53 52
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   18 16
No Yes Caulobacter crescentus CB15   3 3
No Yes Phaeobacter gallaeciensis DSM 17395   6 5
No Yes Phaeobacter gallaeciensis DSM 26640   6 5
No Yes Leisingera methylohalidivorans DSM 14336   9 7
No Yes Octadecabacter antarcticus 307   4 4
No Yes Octadecabacter arcticus 238   4 4
No Yes Rhodobacter sphaeroides KD131   4 4
No Yes Rhodobacter sphaeroides ATCC 17025   2 2
No Yes Rhodobacter sphaeroides 2.4.1   2 2
No Yes Paracoccus aminophilus JCM 7686   4 4
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   4 3
No Yes Rhodospirillum rubrum ATCC 11170   3 3
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acetobacter pasteurianus 386B   2 2
No Yes Acetobacter pasteurianus IFO 3283-12   2 2
No Yes Acetobacter pasteurianus IFO 3283-01-42C   2 2
No Yes Acetobacter pasteurianus IFO 3283-32   2 2
No Yes Acetobacter pasteurianus IFO 3283-26   2 2
No Yes Acetobacter pasteurianus IFO 3283-22   2 2
No Yes Acetobacter pasteurianus IFO 3283-07   2 2
No Yes Acetobacter pasteurianus IFO 3283-03   2 2
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Methylobacterium extorquens DM4   4 4
No Yes Methylobacterium extorquens PA1   3 3
No Yes Brucella ceti TE10759-12   2 2
No Yes Brucella ceti TE28753-12   4 4
No Yes Brucella canis HSK A52141   6 6
No Yes Brucella suis VBI22   4 4
No Yes Brucella suis 1330   4 4
No Yes Brucella suis 1330   4 4
No Yes Brucella melitensis NI   4 4
No Yes Brucella melitensis M5-90   4 4
No Yes Brucella melitensis M28   4 4
No Yes Brucella melitensis bv. 1 str. 16M   4 4
No Yes Brucella abortus A13334   4 4
No Yes Brucella melitensis biovar Abortus 2308   2 2
No Yes Brucella abortus bv. 1 str. 9-941   3 3
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   2 2
No Yes Sinorhizobium meliloti 2011   2 2
No Yes Sinorhizobium meliloti GR4   2 2
No Yes Sinorhizobium meliloti Rm41   2 2
No Yes Sinorhizobium meliloti SM11   2 2
No Yes Sinorhizobium meliloti BL225C   3 3
No Yes Sinorhizobium meliloti 1021   2 2
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   4 3
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   4 3
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Mesorhizobium australicum WSM2073   5 5
No Yes Oligotropha carboxidovorans OM5   7 7
No Yes Oligotropha carboxidovorans OM5   7 7
No Yes Rhodopseudomonas palustris DX-1   12 11
No Yes Rhodopseudomonas palustris TIE-1   14 13
No Yes Rhodopseudomonas palustris HaA2   12 10
No Yes Rhodopseudomonas palustris BisB5   11 9
No Yes Rhodopseudomonas palustris BisB18   5 5
No Yes Rhodopseudomonas palustris CGA009   12 11
No Yes Bradyrhizobium sp. S23321   18 17
No Yes Bradyrhizobium sp. BTAi1   13 13
No Yes Bradyrhizobium oligotrophicum S58   15 15
No Yes Bradyrhizobium japonicum USDA 6   22 20
No Yes Simiduia agarivorans SA1 = DSM 21679   5 5
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio nigripulchritudo VibrioScope   4 4
No Yes Glaciecola psychrophila 170   3 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alcanivorax dieselolei B5   12 12
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Proteus mirabilis BB2000   2 2
No Yes Edwardsiella tarda C07-087   2 2
No Yes Edwardsiella tarda FL6-60   3 3
No Yes Rahnella aquatilis HX2   3 2
No Yes Serratia sp. AS13   2 1
No Yes Serratia plymuthica S13   3 2
No Yes Serratia plymuthica 4Rx13   2 1
No Yes Serratia marcescens WW4   2 1
No Yes Serratia liquefaciens ATCC 27592   2 1
No Yes Dickeya dadantii 3937   2 2
No Yes Pantoea ananatis LMG 5342   2 1
No Yes Pantoea ananatis PA13   2 1
No Yes Pantoea ananatis AJ13355   2 1
No Yes Raoultella ornithinolytica B6   2 1
No Yes Shigella sonnei 53G   4 4
No Yes Shigella flexneri 2002017   3 3
No Yes Shigella flexneri 2a str. 2457T   3 3
No Yes Shigella flexneri 2a str. 301   3 3
No Yes Shigella dysenteriae 1617   3 3
No Yes Shigella boydii Sb227   2 2
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   2 2
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   2 2
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Enterobacter aerogenes EA1509E   2 1
No Yes Escherichia coli E24377A   3 3
No Yes Escherichia coli E. coli PMV-1   3 3
No Yes Escherichia coli JJ1886   3 3
No Yes Escherichia coli LY180   3 3
No Yes Escherichia coli APEC O78   3 3
No Yes Escherichia coli O7:K1 str. CE10   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2050   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2071   3 3
No Yes Escherichia coli O104:H4 str. 2011C-3493   3 3
No Yes Escherichia coli NA114   3 3
No Yes Escherichia coli P12b   3 3
No Yes Escherichia coli str. 'clone D i2'   3 3
No Yes Escherichia coli str. 'clone D i14'   3 3
No Yes Escherichia coli UM146   3 3
No Yes Escherichia coli 042   2 2
No Yes Escherichia coli Xuzhou21   4 4
No Yes Escherichia coli IHE3034   3 3
No Yes Escherichia coli UMNK88   3 3
No Yes Escherichia coli O83:H1 str. NRG 857C   3 3
No Yes Escherichia coli ABU 83972   3 3
No Yes Escherichia coli KO11FL   3 3
No Yes Escherichia coli KO11FL   3 3
No Yes Escherichia coli LF82   3 3
No Yes Escherichia coli ED1a   3 3
No Yes Escherichia coli IAI39   3 3
No Yes Escherichia coli UMN026   3 3
No Yes Escherichia coli 55989   3 3
No Yes Escherichia coli S88   3 3
No Yes Escherichia coli IAI1   3 3
No Yes Escherichia coli W   3 3
No Yes Escherichia coli W   3 3
No Yes Escherichia coli DH1   3 3
No Yes Escherichia coli DH1   3 3
No Yes Escherichia coli ATCC 8739   3 3
No Yes Escherichia coli BL21(DE3)   2 2
No Yes Escherichia coli BL21(DE3)   2 2
No Yes Escherichia coli SMS-3-5   3 3
No Yes Escherichia coli SE15   3 3
No Yes Escherichia coli SE11   3 3
No Yes Escherichia coli APEC O1   3 3
No Yes Escherichia coli O103:H2 str. 12009   3 3
No Yes Escherichia coli UTI89   3 3
No Yes Escherichia coli 536   3 3
No Yes Escherichia coli HS   3 3
No Yes Escherichia coli ETEC H10407   3 3
No Yes Escherichia coli O55:H7 str. RM12579   3 3
No Yes Escherichia coli O55:H7 str. CB9615   3 3
No Yes Escherichia coli O26:H11 str. 11368   3 3
No Yes Escherichia coli CFT073   3 3
No Yes Escherichia coli O111:H- str. 11128   3 3
No Yes Escherichia coli O127:H6 str. E2348/69   3 3
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   4 4
No Yes Escherichia coli O157:H7 str. EDL933   3 3
No Yes Escherichia coli str. K-12 substr. MDS42   3 3
No Yes Escherichia coli BW2952   3 3
No Yes Escherichia coli str. K-12 substr. MG1655   3 3
No Yes Escherichia coli str. K-12 substr. W3110   3 3
No Yes Escherichia coli str. K-12 substr. DH10B   3 3
No Yes Escherichia coli B str. REL606   2 2
No Yes Enterobacter cloacae SCF1   3 2
No Yes Azotobacter vinelandii CA6   2 2
No Yes Azotobacter vinelandii CA   2 2
No Yes Pseudomonas denitrificans ATCC 13867   7 7
No Yes Pseudomonas syringae pv. phaseolicola 1448A   2 2
No Yes Pseudomonas syringae pv. syringae B728a   3 3
No Yes Pseudomonas stutzeri CCUG 29243   4 4
No Yes Pseudomonas stutzeri DSM 10701   3 3
No Yes Pseudomonas stutzeri DSM 4166   4 4
No Yes Pseudomonas stutzeri RCH2   4 4
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   4 4
No Yes Pseudomonas monteilii SB3101   3 3
No Yes Pseudomonas monteilii SB3078   3 3
No Yes Pseudomonas putida H8234   5 5
No Yes Pseudomonas putida HB3267   3 3
No Yes Pseudomonas putida NBRC 14164   5 5
No Yes Pseudomonas putida DOT-T1E   5 5
No Yes Pseudomonas putida S16   2 2
No Yes Pseudomonas putida BIRD-1   3 3
No Yes Pseudomonas putida W619   5 5
No Yes Pseudomonas putida ND6   4 4
No Yes Pseudomonas putida KT2440   4 4
No Yes Pseudomonas putida GB-1   2 2
No Yes Pseudomonas protegens CHA0   7 6
No Yes Pseudomonas poae RE*1-1-14   4 3
No Yes Pseudomonas fluorescens F113   7 5
No Yes Pseudomonas fluorescens A506   6 5
No Yes Pseudomonas fluorescens R124   5 4
No Yes Pseudomonas fluorescens Pf0-1   6 5
No Yes Pseudomonas resinovorans NBRC 106553   6 6
No Yes Pseudomonas mendocina NK-01   5 5
No Yes Pseudomonas aeruginosa SCV20265   5 5
No Yes Pseudomonas aeruginosa MTB-1   5 5
No Yes Pseudomonas aeruginosa LES431   5 5
No Yes Pseudomonas aeruginosa RP73   5 5
No Yes Pseudomonas aeruginosa B136-33   5 5
No Yes Pseudomonas aeruginosa PA1R   5 5
No Yes Pseudomonas aeruginosa PA1   5 5
No Yes Pseudomonas aeruginosa DK2   5 5
No Yes Pseudomonas aeruginosa NCGM2.S1   5 5
No Yes Pseudomonas aeruginosa M18   5 5
No Yes Pseudomonas aeruginosa LESB58   5 5
No Yes Pseudomonas aeruginosa PA7   5 5
No Yes Pseudomonas aeruginosa PAO1   5 5
No Yes Acinetobacter genomosp. 13TU RUH2624   3 3
No Yes Acinetobacter sp. SH024   3 3
No Yes Acinetobacter calcoaceticus ruh2202   3 3
No Yes Acinetobacter baumannii ZW85-1   3 3
No Yes Acinetobacter baumannii TYTH-1   3 3
No Yes Acinetobacter baumannii BJAB0868   3 3
No Yes Acinetobacter baumannii BJAB0715   4 4
No Yes Acinetobacter baumannii BJAB07104   3 3
No Yes Acinetobacter baumannii TCDC-AB0715   3 3
No Yes Acinetobacter baumannii D1279779   2 2
No Yes Acinetobacter baumannii MDR-TJ   3 3
No Yes Acinetobacter baumannii 1656-2   3 3
No Yes Acinetobacter baumannii ATCC 19606   4 4
No Yes Acinetobacter baumannii AB307-0294   4 4
No Yes Acinetobacter baumannii AYE   4 4
No Yes Acinetobacter baumannii SDF   2 2
No Yes Acinetobacter baumannii MDR-ZJ06   3 3
No Yes Acinetobacter baumannii AB0057   4 4
No Yes Acinetobacter baumannii ACICU   3 3
No Yes Acinetobacter radioresistens SH164   5 5
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   2 2
No Yes Cycloclasticus zancles 7-ME   3 3
No Yes Caldisphaera lagunensis DSM 15908   2 2
No Yes Sulfolobus islandicus LAL14/1   2 2
No Yes Sulfolobus islandicus REY15A   2 2
No Yes Sulfolobus islandicus HVE10/4   2 2
No Yes Sulfolobus islandicus Y.G.57.14   3 3
No Yes Sulfolobus islandicus L.S.2.15   3 3
No Yes Sulfolobus islandicus M.16.27   5 5
No Yes Sulfolobus islandicus M.14.25   2 2
No Yes Sulfolobus islandicus M.16.4   2 2
No Yes Sulfolobus islandicus L.D.8.5   3 3
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   2 2
No Yes Sulfolobus acidocaldarius Ron12/I   2 2
No Yes Sulfolobus acidocaldarius N8   2 2
No Yes Archaeoglobus sulfaticallidus PM70-1   3 3
No Yes Ferroplasma acidarmanus fer1   2 2
No Yes Halovivax ruber XH-70   1 1
No Yes Natrinema pellirubrum DSM 15624   3 3
No Yes Natronococcus occultus SP4   3 3
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 15 15
No Yes Homo sapiens (NCBI version) Human 7 7
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Heliconius numata (Incomplete)   4 4
No Yes Moniliophthora perniciosa FA553 (Genome survey)   6 5
No Yes Ricinus communis (Early assembly) Castor bean 4 4
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   5 4
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 4 3
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 3 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 3 2
No Yes Tupaia belangeri 69 Northern tree shrew 4 2
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 2 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 3 3
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 3 2
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 69_1 Large flying fox 3 2
No Yes Sorex araneus 69_1 European shrew 2 2
No Yes Erinaceus europaeus 69 Western European hedgehog 3 2
No Yes Procavia capensis 69_1 Cape rock hyrax 4 2
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 3 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 3 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 3 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 3 3
No Yes Petromyzon marinus 69_7.0 Sea lamprey 3 3
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 3 3
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Gadus morhua 69_1 Atlantic cod 3 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 69_1 Japanese medaka 3 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 4 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 3 3
No Yes 1_050719N (meta-genome)   7 7
No Yes 1_Upper_euphotic (meta-genome)   14 14
No Yes 2_050719S (meta-genome)   16 15
No Yes 2_Base_of_chrolophyll_max (meta-genome)   31 30
No Yes 3_050719R (meta-genome)   13 13
No Yes 3_Below_base_of_euphotic (meta-genome)   38 37
No Yes 4_050719Q (meta-genome)   50 50
No Yes 4_Deep_abyss (meta-genome)   70 69
No Yes 5_050719P (meta-genome)   46 46
No Yes 5_Below_upper_mesopelagic (meta-genome)   49 49
No Yes 6_Upper_euphotic (meta-genome)   31 31
No Yes 7_Oxygen_minimum_layer (meta-genome)   38 38
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   31 31
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   22 22
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   35 33
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   34 34
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   14 12
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   9 9
No Yes Combined (meta-genome)   227 222
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   113 108
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   60 59
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   46 44
No Yes Dump bottom (Dump bottom) (meta-genome)   915 907
No Yes Dump top (Dump top) (meta-genome)   824 818
No Yes Endophytic microbiome from Rice (meta-genome)   41 40
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   23 22
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   57 57
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   27 27
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   101 98
No Yes Fungus garden combined (combined) (meta-genome)   27 22
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   95 94
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   122 122
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   3 3
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   5 5
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   25 25
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   29 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   40 40
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   28 28
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   14 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   21 21
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   26 26
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   25 25
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   22 22
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   14 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   6 6
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   3 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   144 142
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   143 143
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   18 18
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   434 425
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   105 105
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   119 117
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   97 91
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   75 75
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   43 42
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   192 189
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   94 93
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   43 41
No Yes Mouse Gut Community lean1 (meta-genome)   2 2
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   222834 202631
No Yes Nymph Lake Bulk Water (meta-genome)   2 2
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   202 199
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   5 5
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   3 3
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   6 6
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   179 178
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   101 99
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   114 112
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   23 23
No Yes Sludge/US, Jazz Assembly (meta-genome)   21 20
No Yes Sludge/US, Phrap Assembly (meta-genome)   47 45
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   127 126
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   485 482
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   730 724
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   416 415
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   291 290
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   597 590
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   674 668
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   2668 2453
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   65 65
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   363 359
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   82 81
No Yes Uniprot 2018_03 genome   72761 65425
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   19 19
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   22 22
No Yes Global Ocean Sampling Expedition (GOS)   6477 6381
No Yes NCBI plasmid sequences (Plasmids)   246 230
No Yes PDB chains (SCOP 1.75) (PDB)   12 12
No Yes Protein Data Bank (all PDB sequenc)   96 96
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   374 374
No Yes TargetDB (Targets)   49 49
No Yes The Salmonella enterica Pan-genome (meta-genome)   32 32

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