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  Home > Genomes > GCM domain domains in all genomes


GCM domain superfamily domain assignments
in
all genomes

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25 selected genomes have 50 significant domains in 50 proteins.

Showing genomes 1 to 25 of 196
  1 2 3 4 5 6 7 8   Next Last

Homo sapiens 76_38 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000259803   3.27e-84   14-170   GCM domain  
ENSP00000368805   3.14e-82   19-174   GCM domain  

Pan troglodytes 76_2.1.4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000030262   4.84e-82   19-174   GCM domain  
ENSPTRP00000031247   3.27e-84   14-170   GCM domain  

Gorilla gorilla 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000006386   3.27e-84   14-170   GCM domain  
ENSGGOP00000027547   3.14e-82   19-174   GCM domain  

Pongo abelii 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000018150   1.31e-81   19-174   GCM domain  
ENSPPYP00000018702   3.27e-84   14-170   GCM domain  

Nomascus leucogenys 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000768   2.22e-81   19-174   GCM domain  
ENSNLEP00000004289   3.27e-84   14-170   GCM domain  

Papio anubis 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000013624   4.97e-82   19-174   GCM domain  

Macaca mulatta 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000010134   1.15e-81   19-174   GCM domain  
ENSMMUP00000029076   3.27e-84   14-170   GCM domain  

Callithrix jacchus 76_3.2.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000020622   3.27e-84   14-170   GCM domain  
ENSCJAP00000035607   1.83e-76   5-145   GCM domain  

Otolemur garnettii 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000007058   3.01e-83   15-170   GCM domain  
ENSOGAP00000010895   4.32e-81   21-176   GCM domain  

Microcebus murinus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000002081   1.07e-82   14-170   GCM domain  
ENSMICP00000003861   6.8e-82   19-174   GCM domain  

Rattus norvegicus 76_5.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000010583   3.27e-86   14-170   GCM domain  
ENSRNOP00000020244   6.93e-80   19-174   GCM domain  

Mus musculus 76_38 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000021791   4.05e-80   19-174   GCM domain  
ENSMUSP00000024104   2.75e-86   14-170   GCM domain  

Dipodomys ordii 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000002104   0.0000183   152-175   GCM domain  
ENSDORP00000003392   3.79e-79   14-169   GCM domain  

Ictidomys tridecemlineatus 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000008574   7.19e-80   19-174   GCM domain  
ENSSTOP00000013224   1.57e-68   14-140   GCM domain  
ENSSTOP00000015608   2.48e-83   14-170   GCM domain  
ENSSTOP00000020647   1.44e-72   14-167   GCM domain  

Heterocephalus glaber v1.7-2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000259803   1.7e-84   14-170   GCM domain  
HGL_H00000368805   2.48e-76   51-194   GCM domain  

Cavia porcellus 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000006181   8.89e-79   2-146   GCM domain  
ENSCPOP00000010118   1.83e-81   19-174   GCM domain  

Oryctolagus cuniculus 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000007982   9.94e-61   1-110   GCM domain  
ENSOCUP00000015197   1.96e-80   19-174   GCM domain  

Ochotona princeps 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000003009   1.01e-71   12-146   GCM domain  
ENSOPRP00000011533   4.18e-80   19-174   GCM domain  

Tupaia belangeri 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000005309   7.45e-80   19-174   GCM domain  
ENSTBEP00000006823   1.44e-43   2-85   GCM domain  

Sus scrofa 76_10.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000002839   1.96e-78   39-186   GCM domain  

Bos taurus 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000010709   1.23e-83   13-169   GCM domain  
ENSBTAP00000025010   4.32e-82   20-175   GCM domain  

Ovis aries 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000016428   1.23e-83   13-169   GCM domain  
ENSOARP00000016647   4.05e-82   19-174   GCM domain  

Vicugna pacos 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000002778   4.18e-81   19-174   GCM domain  
ENSVPAP00000005921   9.15e-74   1-150   GCM domain  

Tursiops truncatus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000003446   1.7e-81   19-174   GCM domain  
ENSTTRP00000014455   1.16e-83   14-170   GCM domain  

Mustela putorius furo 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000000627   3.92e-81   19-174   GCM domain  
ENSMPUP00000008800   2.35e-84   20-176   GCM domain  

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Showing genomes 1 to 25 of 196

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View all assignments containing a GCM domain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   1930 1930
No Yes Homo sapiens 76_38 Human 2 2
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 2 2
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 4
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 2 2
No Yes Ochotona princeps 76 American pika 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 2 2
No Yes Vicugna pacos 76_1 Alpaca 2 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 2
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 2 2
No Yes Equus caballus 76_2 Horse 2 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 2 2
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 76_3 African savanna elephant 2 2
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   3 3
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus laevis African clawed frog 4 4
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 76_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1 1
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 2 2
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 3 3
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   2 2
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   2 2
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 2
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   6 6
No Yes Melampsora laricis-populina   3 3
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   4 4
No Yes Galerina marginata v1.0   3 3
No Yes Hebeloma cylindrosporum h7 v2.0   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   2 2
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 2 2
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 2 2
No Yes Homo sapiens (NCBI version) Human 2 2
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 3 3
No Yes Cavia porcellus 69_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 2 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 2
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 2 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 2 2
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 69_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Combined (meta-genome)   1 1
No Yes NCBI 2017_08 genome   739 738
No Yes STRING v9.0.5 (STRING)   77 77
No Yes Uniprot 2018_03 genome   584 576
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   1 1

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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