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Neurotransmitter-gated ion-channel transmembrane pore superfamily domain assignments
in
Vibrio fischeri ES114


No domain assignments for these genomes.


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Select to display   Genome       Domains   Proteins
No Yes ALL   73999 73999
No Yes Homo sapiens 76_38 Human 129 129
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 45 45
No Yes Gorilla gorilla 76_3.1 Western gorilla 57 57
No Yes Pongo abelii 76_2 Sumatran orangutan 48 48
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 50 50
No Yes Papio anubis 76 Olive baboon 47 47
No Yes Macaca mulatta 76_1 Rhesus monkey 66 65
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 103 103
No Yes Otolemur garnettii 76_3 Small-eared galago 47 47
No Yes Microcebus murinus 76_1 Gray mouse lemur 51 45
No Yes Rattus norvegicus 76_5.0 Norway rat 47 47
No Yes Mus musculus 76_38 House mouse 60 60
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 46 42
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 44 44
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 49 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 44 44
No Yes Oryctolagus cuniculus 76_2 Rabbit 47 47
No Yes Ochotona princeps 76 American pika 45 40
No Yes Tupaia belangeri 76 Northern tree shrew 40 35
No Yes Sus scrofa 76_10.2 Pig 49 49
No Yes Bos taurus 76_3.1 Cattle 52 52
No Yes Ovis aries 76_3.1 Sheep 52 52
No Yes Vicugna pacos 76_1 Alpaca 35 33
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 48 46
No Yes Mustela putorius furo 76_1.0 Domestic ferret 46 46
No Yes Ailuropoda melanoleuca 76_1 Giant panda 50 50
No Yes Canis familiaris 76_3.1 Dog 58 58
No Yes Felis catus 76_6.2 Domestic cat 47 47
No Yes Equus caballus 76_2 Horse 45 45
No Yes Myotis lucifugus 76_2.0 Little brown bat 45 45
No Yes Pteropus vampyrus 76_1 Large flying fox 44 44
No Yes Sorex araneus 76_1 European shrew 38 30
No Yes Erinaceus europaeus 76 Western European hedgehog 41 37
No Yes Procavia capensis 76_1 Cape rock hyrax 43 40
No Yes Loxodonta africana 76_3 African savanna elephant 58 58
No Yes Echinops telfairi 76 Small Madagascar hedgehog 46 40
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 50 50
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 28 27
No Yes Macropus eugenii 76_1.0 Tammar wallaby 44 43
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 51 51
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 47 47
No Yes Ornithorhynchus anatinus 76_5 Platypus 44 43
No Yes Saccoglossus kowalevskii v3.0   143 143
No Yes Petromyzon marinus 76_7.0 Sea lamprey 25 25
No Yes Meleagris gallopavo 76_2 Turkey 48 48
No Yes Gallus gallus 76_4 Chicken 44 44
No Yes Anas platyrhynchos 76_1.0 Mallard 41 41
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 43 43
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 44 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 57 57
No Yes Anolis carolinensis 76_2.0 Green anole 42 42
No Yes Xenopus laevis African clawed frog 33 33
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 53 53
No Yes Latimeria chalumnae 76_1 Coelacanth 53 53
No Yes Lepisosteus oculatus 76 Spotted gar 61 60
No Yes Gadus morhua 76_1 Atlantic cod 76 72
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 103 102
No Yes Takifugu rubripes 76_4 Torafugu 396 390
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 105 105
No Yes Oryzias latipes 76_1 Japanese medaka 90 90
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 72 72
No Yes Poecilia formosa 76 Amazon molly 76 74
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 102 102
No Yes Astyanax mexicanus 76 Mexican tetra 67 66
No Yes Danio rerio 76_9 Zebrafish 113 113
No Yes Oikopleura dioica   35 35
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 39 39
No Yes Ciona intestinalis 76 Vase tunicate 20 20
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 76 69
No Yes Adineta vaga   119 116
No Yes Octopus bimaculoides 280   80 80
No Yes Crassostrea gigas 22 Pacific oyster 162 148
No Yes Lottia gigantea Owl limpet 80 80
No Yes Helobdella robusta   78 78
No Yes Capitella sp. I   133 132
No Yes Danaus plexippus OGS1.0 Monarch butterfly 25 24
No Yes Heliconius melpomene Postman butterfly 21 19
No Yes Bombyx mori Domestic silkworm 18 18
No Yes Nasonia vitripennis Jewel wasp 21 21
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 67 67
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 24 24
No Yes Linepithema humile v1.1 Argentine ant 29 29
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 24 24
No Yes Solenopsis invicta v.2.2.3 Red fire ant 22 22
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 21 21
No Yes Atta cephalotes v1.1   31 29
No Yes Camponotus floridanus v3.3 Florida carpenter ant 23 22
No Yes Lucilia cuprina Australian sheep blowfly 21 21
No Yes Drosophila grimshawi 1.3   23 22
No Yes Drosophila willistoni 1.3   23 22
No Yes Drosophila pseudoobscura 2.13   24 23
No Yes Drosophila persimilis 1.3   24 23
No Yes Drosophila suzukii   20 18
No Yes Drosophila yakuba 1.3   24 23
No Yes Drosophila simulans 1.3   22 21
No Yes Drosophila sechellia 1.3   24 23
No Yes Drosophila melanogaster 76_5 Fruit fly 60 59
No Yes Drosophila erecta 1.3   23 22
No Yes Drosophila ananassae 1.3   22 21
No Yes Drosophila virilis 1.2   23 22
No Yes Drosophila mojavensis 1.3   23 22
No Yes Megaselia scalaris 22   13 13
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 24 24
No Yes Culex pipiens quinquefasciatus Southern house mosquito 28 28
No Yes Anopheles darlingi 22 American malaria mosquito 15 15
No Yes Anopheles gambiae 49_3j African malaria mosquito 26 26
No Yes Tribolium castaneum 3.0 Red flour beetle 28 28
No Yes Pediculus humanus corporis (Early assembly) Human body louse 20 19
No Yes Acyrthosiphon pisum Pea aphid 22 21
No Yes Rhodnius prolixus 22   25 24
No Yes Daphnia pulex Common water flea 29 28
No Yes Strigamia maritima 22   67 60
No Yes Sarcoptes scabiei   23 23
No Yes Tetranychus urticae Two-spotted spider mite 33 33
No Yes Ixodes scapularis (Preliminary) Black-legged tick 41 37
No Yes Pristionchus pacificus   134 134
No Yes Meloidogyne incognita Southern root-knot nematode 53 52
No Yes Meloidogyne hapla   24 24
No Yes Onchocerca volvulus 22   49 47
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 71 63
No Yes Caenorhabditis japonica   84 80
No Yes Caenorhabditis brenneri   117 113
No Yes Caenorhabditis remanei   111 107
No Yes Caenorhabditis elegans 76_235 Roundworm 127 127
No Yes Caenorhabditis briggsae 2   96 93
No Yes Trichinella spiralis 22   32 27
No Yes Hymenolepis microstoma   15 13
No Yes Echinococcus multilocularis   17 17
No Yes Echinococcus granulosus   18 18
No Yes Taenia solium Pork tapeworm 18 18
No Yes Schistosoma mansoni   20 20
No Yes Acropora digitifera v1.0   57 56
No Yes Nematostella vectensis 1.0 Starlet sea anemone 111 111
No Yes Hydra vulgaris   27 26
No Yes Monosiga brevicollis   3 3
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Chlorella variabilis sp. NC64A   4 4
No Yes Volvox carteri f. nagariensis   3 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   3 3
No Yes Micromonas sp. RCC299   2 2
No Yes Porphyridium purpureum 02_2012   2 2
No Yes Bigelowiella natans CCMP2755 22   9 9
No Yes Cyanophora paradoxa   4 4
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Aureococcus anophagefferens   12 12
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   3 3
No Yes Pythium ultimum v1.7-2   5 5
No Yes Pythium aphanidermatum DAOM BR444 22   4 4
No Yes Pythium irregulare DAOM BR486 22   4 4
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 2 2
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   3 3
No Yes Fragilariopsis cylindrus   4 4
No Yes Symbiodinium minutum clade B1 v1.2   17 17
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   39 39
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Francisella sp. TX077308   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Francisella tularensis subsp. tularensis WY96-3418   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Francisella novicida U112   1 1
No Yes Methanoregula boonei 6A8   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 58 56
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 48 47
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 30 30
No Yes Ascaris suum Victoria/Ghent Pig roundworm 83 83
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 116 114
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Francisella tularensis subsp. mediasiatica FSC147   1 1
No Yes Francisella tularensis subsp. tularensis TIGB03   1 1
No Yes Francisella tularensis subsp. tularensis TI0902   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   1 1
No Yes Francisella tularensis subsp. tularensis FSC198   1 1
No Yes Francisella tularensis subsp. tularensis SCHU S4   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 129 129
No Yes Homo sapiens (NCBI version) Human 80 80
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 42 42
No Yes Loa loa v3.3 (Request) Eye worm 48 47
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 47 46
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 26 26
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Homo sapiens 69_37 Human 48 48
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 43 43
No Yes Gorilla gorilla 69_3.1 Western gorilla 43 43
No Yes Pongo abelii 69_2 Sumatran orangutan 46 46
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 44 44
No Yes Macaca mulatta 69_1 Rhesus monkey 47 46
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 48 48
No Yes Otolemur garnettii 69_3 Small-eared galago 44 44
No Yes Microcebus murinus 69_1 Gray mouse lemur 51 45
No Yes Rattus norvegicus 69_3.4 Norway rat 42 42
No Yes Mus musculus 69_38 House mouse 43 43
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 46 42
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 44 44
No Yes Cavia porcellus 69_3 Domestic guinea pig 42 42
No Yes Oryctolagus cuniculus 69_2 Rabbit 43 43
No Yes Ochotona princeps 69 American pika 45 40
No Yes Tupaia belangeri 69 Northern tree shrew 40 35
No Yes Sus scrofa 69_10.2 Pig 45 45
No Yes Bos taurus 69_3.1 Cattle 45 45
No Yes Vicugna pacos 69_1 Alpaca 35 33
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 48 46
No Yes Mustela putorius furo 69_1.0 Domestic ferret 45 45
No Yes Ailuropoda melanoleuca 69_1 Giant panda 45 45
No Yes Canis familiaris 69_3.1 Dog 45 45
No Yes Felis catus 69 Domestic cat 40 35
No Yes Equus caballus 69_2 Horse 44 44
No Yes Myotis lucifugus 69_2.0 Little brown bat 42 42
No Yes Pteropus vampyrus 69_1 Large flying fox 44 44
No Yes Sorex araneus 69_1 European shrew 38 30
No Yes Erinaceus europaeus 69 Western European hedgehog 41 37
No Yes Procavia capensis 69_1 Cape rock hyrax 43 40
No Yes Loxodonta africana 69_3 African savanna elephant 46 46
No Yes Echinops telfairi 69 Small Madagascar hedgehog 46 40
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 41 40
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 28 27
No Yes Macropus eugenii 69_1.0 Tammar wallaby 44 43
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 41 41
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 45 45
No Yes Ornithorhynchus anatinus 69_5 Platypus 40 39
No Yes Petromyzon marinus 69_7.0 Sea lamprey 24 24
No Yes Meleagris gallopavo 69_2 Turkey 41 41
No Yes Gallus gallus 69_2 Chicken 41 41
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 43 43
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 45 45
No Yes Anolis carolinensis 69_2.0 Green anole 41 41
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 48 48
No Yes Latimeria chalumnae 69_1 Coelacanth 46 46
No Yes Gadus morhua 69_1 Atlantic cod 71 67
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 71 70
No Yes Takifugu rubripes 69_4 Torafugu 73 67
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 71 71
No Yes Oryzias latipes 69_1 Japanese medaka 67 67
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 71 71
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 75 75
No Yes Danio rerio 69_9 Zebrafish 76 76
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 69 Vase tunicate 19 19
No Yes Drosophila melanogaster 69_5 Fruit fly 24 23
No Yes Caenorhabditis elegans 69_215 Roundworm 92 90
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes NCBI 2017_08 genome   28088 27827
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   2703 2645
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   23543 22910
No Yes Global Ocean Sampling Expedition (GOS)   150 150
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   8 8
No Yes Protein Data Bank (all PDB sequenc)   993 993
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1147 1147
No Yes TargetDB (Targets)   70 68

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