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Ran binding protein zinc finger-like superfamily domain assignments
in
Coniophora puteana

Assignment details

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Coniophora puteana has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Conpu1|146516|estExt_fgenesh1_pg.C_130143   0.00000251   241-279   Ran binding protein zinc finger-like  
  0.00000471   415-446   Ran binding protein zinc finger-like  
jgi|Conpu1|150926|gm1.2917_g   0.0000147   405-432   Ran binding protein zinc finger-like  
jgi|Conpu1|169771|estExt_Genemark1.C_180092   0.0000243   203-225   Ran binding protein zinc finger-like  
  0.0126   131-164   Ran binding protein zinc finger-like  
jgi|Conpu1|96390|estExt_Genewise1.C_1_t60202   0.0000129   285-310   Ran binding protein zinc finger-like  
 
Weak hits:
jgi|Conpu1|45829|e_gw1.1.1013.1   0.00282   649-671   Ran binding protein zinc finger-like  
jgi|Conpu1|79786|fgenesh1_kg.2_#_312_#_isotig04303   0.00706   1114-1134   Ran binding protein zinc finger-like  
jgi|Conpu1|83503|fgenesh1_kg.9_#_264_#_isotig04325   0.00017   939-963   Ran binding protein zinc finger-like  
  0.00256   883-911   Ran binding protein zinc finger-like  
  0.00271   829-856   Ran binding protein zinc finger-like  
  0.00357   774-801   Ran binding protein zinc finger-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   70733 70733
No Yes Homo sapiens 76_38 Human 105 81
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 32 20
No Yes Gorilla gorilla 76_3.1 Western gorilla 46 31
No Yes Pongo abelii 76_2 Sumatran orangutan 36 22
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 37 25
No Yes Papio anubis 76 Olive baboon 35 21
No Yes Macaca mulatta 76_1 Rhesus monkey 67 49
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 84 58
No Yes Otolemur garnettii 76_3 Small-eared galago 35 23
No Yes Microcebus murinus 76_1 Gray mouse lemur 23 14
No Yes Rattus norvegicus 76_5.0 Norway rat 43 27
No Yes Mus musculus 76_38 House mouse 68 51
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 27 15
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 35 23
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 29 21
No Yes Cavia porcellus 76_3 Domestic guinea pig 30 22
No Yes Oryctolagus cuniculus 76_2 Rabbit 33 23
No Yes Ochotona princeps 76 American pika 27 15
No Yes Tupaia belangeri 76 Northern tree shrew 13 10
No Yes Sus scrofa 76_10.2 Pig 43 27
No Yes Bos taurus 76_3.1 Cattle 34 21
No Yes Ovis aries 76_3.1 Sheep 36 28
No Yes Vicugna pacos 76_1 Alpaca 21 13
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 27 19
No Yes Mustela putorius furo 76_1.0 Domestic ferret 32 21
No Yes Ailuropoda melanoleuca 76_1 Giant panda 38 25
No Yes Canis familiaris 76_3.1 Dog 58 35
No Yes Felis catus 76_6.2 Domestic cat 29 20
No Yes Equus caballus 76_2 Horse 37 24
No Yes Myotis lucifugus 76_2.0 Little brown bat 35 22
No Yes Pteropus vampyrus 76_1 Large flying fox 26 17
No Yes Sorex araneus 76_1 European shrew 21 16
No Yes Erinaceus europaeus 76 Western European hedgehog 25 18
No Yes Procavia capensis 76_1 Cape rock hyrax 25 15
No Yes Loxodonta africana 76_3 African savanna elephant 42 28
No Yes Echinops telfairi 76 Small Madagascar hedgehog 30 21
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 36 24
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 37 18
No Yes Macropus eugenii 76_1.0 Tammar wallaby 20 13
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 44 29
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 32 23
No Yes Ornithorhynchus anatinus 76_5 Platypus 32 17
No Yes Saccoglossus kowalevskii v3.0   31 18
No Yes Petromyzon marinus 76_7.0 Sea lamprey 26 16
No Yes Meleagris gallopavo 76_2 Turkey 33 19
No Yes Gallus gallus 76_4 Chicken 30 19
No Yes Anas platyrhynchos 76_1.0 Mallard 19 15
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 24 17
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 25 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 27 17
No Yes Anolis carolinensis 76_2.0 Green anole 34 22
No Yes Xenopus laevis African clawed frog 76 54
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 37 25
No Yes Latimeria chalumnae 76_1 Coelacanth 42 28
No Yes Lepisosteus oculatus 76 Spotted gar 43 26
No Yes Gadus morhua 76_1 Atlantic cod 33 26
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 34 28
No Yes Takifugu rubripes 76_4 Torafugu 107 82
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 43 32
No Yes Oryzias latipes 76_1 Japanese medaka 37 25
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 36 24
No Yes Poecilia formosa 76 Amazon molly 29 21
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 58 40
No Yes Astyanax mexicanus 76 Mexican tetra 28 21
No Yes Danio rerio 76_9 Zebrafish 47 37
No Yes Oikopleura dioica   4 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 3 2
No Yes Ciona intestinalis 76 Vase tunicate 13 8
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 29 16
No Yes Adineta vaga   22 16
No Yes Octopus bimaculoides 280   30 20
No Yes Crassostrea gigas 22 Pacific oyster 22 15
No Yes Lottia gigantea Owl limpet 17 13
No Yes Helobdella robusta   11 9
No Yes Capitella sp. I   14 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 14 10
No Yes Heliconius melpomene Postman butterfly 11 8
No Yes Bombyx mori Domestic silkworm 10 9
No Yes Nasonia vitripennis Jewel wasp 15 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 28 21
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 15 10
No Yes Linepithema humile v1.1 Argentine ant 15 10
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 15 11
No Yes Solenopsis invicta v.2.2.3 Red fire ant 15 8
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 16 10
No Yes Atta cephalotes v1.1   17 10
No Yes Camponotus floridanus v3.3 Florida carpenter ant 17 11
No Yes Lucilia cuprina Australian sheep blowfly 15 9
No Yes Drosophila grimshawi 1.3   18 12
No Yes Drosophila willistoni 1.3   21 15
No Yes Drosophila pseudoobscura 2.13   14 9
No Yes Drosophila persimilis 1.3   16 12
No Yes Drosophila suzukii   15 9
No Yes Drosophila yakuba 1.3   18 11
No Yes Drosophila simulans 1.3   11 9
No Yes Drosophila sechellia 1.3   14 11
No Yes Drosophila melanogaster 76_5 Fruit fly 46 28
No Yes Drosophila erecta 1.3   20 12
No Yes Drosophila ananassae 1.3   18 12
No Yes Drosophila virilis 1.2   15 11
No Yes Drosophila mojavensis 1.3   15 11
No Yes Megaselia scalaris 22   7 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 17 11
No Yes Culex pipiens quinquefasciatus Southern house mosquito 17 12
No Yes Anopheles darlingi 22 American malaria mosquito 11 7
No Yes Anopheles gambiae 49_3j African malaria mosquito 16 13
No Yes Tribolium castaneum 3.0 Red flour beetle 22 13
No Yes Pediculus humanus corporis (Early assembly) Human body louse 16 10
No Yes Acyrthosiphon pisum Pea aphid 12 9
No Yes Rhodnius prolixus 22   15 14
No Yes Daphnia pulex Common water flea 30 28
No Yes Strigamia maritima 22   17 13
No Yes Sarcoptes scabiei   10 8
No Yes Tetranychus urticae Two-spotted spider mite 11 11
No Yes Ixodes scapularis (Preliminary) Black-legged tick 14 10
No Yes Pristionchus pacificus   9 7
No Yes Meloidogyne incognita Southern root-knot nematode 10 8
No Yes Meloidogyne hapla   8 5
No Yes Onchocerca volvulus 22   7 5
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 13 9
No Yes Caenorhabditis japonica   7 6
No Yes Caenorhabditis brenneri   8 7
No Yes Caenorhabditis remanei   7 6
No Yes Caenorhabditis elegans 76_235 Roundworm 16 15
No Yes Caenorhabditis briggsae 2   7 6
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   7 5
No Yes Echinococcus multilocularis   10 7
No Yes Echinococcus granulosus   11 7
No Yes Taenia solium Pork tapeworm 12 7
No Yes Schistosoma mansoni   13 11
No Yes Mnemiopsis leidyi Sea walnut 48 20
No Yes Thelohanellus kitauei   3 2
No Yes Acropora digitifera v1.0   13 10
No Yes Nematostella vectensis 1.0 Starlet sea anemone 16 12
No Yes Hydra vulgaris   13 8
No Yes Amphimedon queenslandica   26 16
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   3 2
No Yes Monosiga brevicollis   5 5
No Yes Sphaeroforma arctica JP610   12 6
No Yes Capsaspora owczarzaki ATCC 30864   9 5
No Yes Conidiobolus coronatus NRRL28638 v1.0   10 4
No Yes Mortierella verticillata NRRL 6337   10 6
No Yes Phycomyces blakesleeanus   7 5
No Yes Rhizopus oryzae RA 99-880   10 6
No Yes Mucor circinelloides   8 4
No Yes Rhizomucor miehei CAU432   10 7
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   4 3
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Sporobolomyces roseus IAM 13481   2 2
No Yes Microbotryum violaceum 22   3 3
No Yes Wallemia sebi v1.0   3 2
No Yes Sphaerobolus stellatus v1.0   6 3
No Yes Piloderma croceum F 1598 v1.0   3 2
No Yes Serpula lacrymans var. lacrymans S7.9   3 2
No Yes Coniophora puteana   5 4
No Yes Hydnomerulius pinastri v2.0   3 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   3 2
No Yes Pisolithus microcarpus 441 v1.0   4 3
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   4 3
No Yes Pleurotus ostreatus Oyster mushroom 3 2
No Yes Amanita thiersii Skay4041 v1.0   4 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 3 2
No Yes Galerina marginata v1.0   4 3
No Yes Hebeloma cylindrosporum h7 v2.0   5 3
No Yes Laccaria bicolor S238N-H82   5 5
No Yes Agaricus bisporus var. bisporus   4 3
No Yes Schizophyllum commune   4 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 3
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   5 4
No Yes Punctularia strigosozonata v1.0   5 3
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   3 2
No Yes Tulasnella calospora AL13/4D v1.0   5 3
No Yes Postia placenta   3 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   15 14
No Yes Fomitopsis pinicolav1.0   4 3
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   3 2
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   5 3
No Yes Trametes versicolor v1.0   5 3
No Yes Tremella mesenterica Witches' butter 4 3
No Yes Daldinia eschscholzii EC12 v1.0   6 5
No Yes Apiospora montagnei NRRL 25634 v1.0   5 3
No Yes Magnaporthe poae ATCC 64411 22   3 2
No Yes Magnaporthe grisea 70-15   5 4
No Yes Podospora anserina   3 2
No Yes Sporotrichum thermophile ATCC 42464   4 3
No Yes Thielavia terrestris NRRL 8126   4 3
No Yes Chaetomium globosum CBS 148.51   3 2
No Yes Neurospora tetrasperma   4 3
No Yes Neurospora discreta FGSC 8579   3 2
No Yes Neurospora crassa OR74A   4 3
No Yes Cryphonectria parasitica Chestnut blight fungus 4 3
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   5 4
No Yes Acremonium alcalophilumv 1.0   4 3
No Yes Glomerella graminicola 22   4 3
No Yes Fusarium graminearum   5 4
No Yes Nectria haematococca mpVI   5 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   5 3
No Yes Fusarium verticillioides 7600   3 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   5 3
No Yes Trichoderma atroviride   4 3
No Yes Trichoderma citrinoviride v1.0   4 2
No Yes Trichoderma reesei 1.2   4 2
No Yes Trichoderma virens Gv29-8   5 3
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   5 3
No Yes Amorphotheca resinae v1.0 Creosote fungus 7 5
No Yes Botrytis cinerea B05.10   5 4
No Yes Sclerotinia sclerotiorum   3 2
No Yes Blumeria graminis 22   3 2
No Yes Didymella exigua CBS 183.55 v1.0   4 3
No Yes Leptosphaeria maculans 22   3 2
No Yes Setosphaeria turcica v1.0   4 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   2 2
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   2 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 4 3
No Yes Alternaria brassicicola   4 3
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   5 4
No Yes Pyrenophora tritici-repentis   4 3
No Yes Stagonospora nodorum   5 4
No Yes Mycosphaerella graminicola IPO323   4 2
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   4 3
No Yes Septoria musiva v1.0   3 2
No Yes Mycosphaerella fijiensis CIRAD86   4 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 2
No Yes Paracoccidioides brasiliensis Pb18   4 2
No Yes Coccidioides posadasii RMSCC 3488   5 3
No Yes Coccidioides immitis RS   5 3
No Yes Ajellomyces dermatitidis SLH14081   5 4
No Yes Histoplasma capsulatum class NAmI strain WU24   4 3
No Yes Microsporum canis CBS 113480   5 4
No Yes Trichophyton equinum CBS 127.97   5 4
No Yes Trichophyton verrucosum HKI 0517   4 3
No Yes Arthroderma benhamiae CBS 112371   4 3
No Yes Trichophyton tonsurans CBS 112818   5 4
No Yes Trichophyton rubrum CBS 118892   5 4
No Yes Uncinocarpus reesii 1704   3 2
No Yes Aspergillus zonatus v1.0   5 3
No Yes Penicillium chrysogenum Wisconsin 54-1255   5 3
No Yes Penicillium chrysogenum v1.0   5 3
No Yes Aspergillus acidus v1.0   4 3
No Yes Aspergillus fumigatus Af293   3 2
No Yes Aspergillus brasiliensis v1.0   4 3
No Yes Aspergillus nidulans FGSC A4   4 3
No Yes Aspergillus sydowii v1.0   3 2
No Yes Aspergillus versicolor v1.0   4 3
No Yes Aspergillus glaucus   4 3
No Yes Aspergillus carbonarius ITEM 5010   3 2
No Yes Neosartorya fischeri NRRL 181   3 2
No Yes Aspergillus terreus NIH2624   5 3
No Yes Aspergillus tubingensis v1.0   4 3
No Yes Aspergillus wentii v1.0   4 3
No Yes Aspergillus oryzae RIB40   4 2
No Yes Aspergillus niger 22   4 3
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   5 3
No Yes Aspergillus clavatus NRRL 1   5 3
No Yes Penicillium marneffei ATCC 18224   5 4
No Yes Tuber melanosporum Mel28 22   5 4
No Yes Tuber melanosporum Vittad Perigord truffle 5 4
No Yes Hansenula polymorpha v2.0   2 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   3 2
No Yes Pichia membranifaciensv1.0   3 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   4 2
No Yes Candida dubliniensis CD36   3 2
No Yes Candida tropicalis MYA-3404   3 2
No Yes Candida parapsilosis   2 1
No Yes Candida albicans SC5314   3 2
No Yes Lodderomyces elongisporus NRRL YB-4239   4 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   4 2
No Yes Pichia stipitis CBS 6054   3 2
No Yes Candida guilliermondii ATCC 6260   4 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 2
No Yes Debaromyces hansenii   3 2
No Yes Wickerhamomyces anomalus   4 2
No Yes Pichia pastoris GS115   3 2
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 1
No Yes Yarrowia lipolytica CLIB122   4 2
No Yes Candida lusitaniae ATCC 42720   4 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 2
No Yes Vanderwaltozyma polyspora DSM 70294   4 2
No Yes Candida glabrata CBS138   4 2
No Yes Kluyveromyces thermotolerans CBS 6340   4 2
No Yes Lachancea kluyveri   3 2
No Yes Kluyveromyces waltii   3 2
No Yes Ashbya gossypii ATCC 10895   3 2
No Yes Zygosaccharomyces rouxii   3 2
No Yes Saccharomyces mikatae MIT   2 1
No Yes Saccharomyces paradoxus MIT   3 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 3 2
No Yes Saccharomyces bayanus MIT   3 2
No Yes Kluyveromyces lactis   3 2
No Yes Schizosaccharomyces cryophilus OY26 22   4 2
No Yes Schizosaccharomyces octosporus yFS286   5 3
No Yes Schizosaccharomyces japonicus yFS275   5 3
No Yes Schizosaccharomyces pombe Fission yeast 3 1
No Yes Catenaria anguillulae PL171 v1.0   16 7
No Yes Allomyces macrogynus ATCC 38327   16 10
No Yes Spizellomyces punctatus DAOM BR117   9 3
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Selaginella moellendorffii   48 29
No Yes Pinus taeda Loblolly pine 13 11
No Yes Picea abies Norway spruce 19 14
No Yes Eucalyptus grandis v201 Rose gum 77 40
No Yes Theobroma cacao B97-61/B2 v1 Cacao 38 20
No Yes Gossypium raimondii v221   169 99
No Yes Citrus clementina v165   88 64
No Yes Citrus sinensis v154 Sweet orange 73 45
No Yes Thellungiella halophila v173   36 20
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 52 29
No Yes Capsella rubella v183   40 20
No Yes Arabidopsis lyrata Lyrate rockcress 34 18
No Yes Arabidopsis thaliana 10 Thale cress 45 26
No Yes Carica papaya Papaya 30 17
No Yes Medicago truncatula Barrel medic 98 66
No Yes Phaseolus vulgaris v186 French bean 63 28
No Yes Glycine max v109 Soybean 107 50
No Yes Cucumis sativus v122 Cucumber 68 41
No Yes Fragaria vesca Wild strawberry 32 18
No Yes Malus domestica v196 Apple 67 40
No Yes Prunus persica v139 Peach 35 20
No Yes Linum usitatissimum v200 Flax 59 31
No Yes Manihot esculenta v147 Cassava 55 26
No Yes Populus trichocarpa v156 Black cottonwood 71 37
No Yes Vitis vinifera Wine grape 37 19
No Yes Mimulus guttatus v140 Spotted monkey flower 40 21
No Yes Solanum lycopersicum v.2.3 Tomato 33 20
No Yes Solanum tuberosum Potato 59 31
No Yes Actinidia chinensis Hongyang   45 31
No Yes Aquilegia coerulea v195   91 51
No Yes Triticum urartu 22   26 15
No Yes Triticum aestivum 22 Bread wheat 92 54
No Yes Aegilops tauschii 22   26 16
No Yes Brachypodium distachyon Stiff brome 59 31
No Yes Oryza barthii 22 African wild rice 46 32
No Yes Oryza meridionalis 22   46 34
No Yes Oryza glumaepatula 22   60 38
No Yes Oryza glaberrima African rice 34 19
No Yes Oryza punctata 22   69 46
No Yes Oryza nivara 22   47 28
No Yes Oryza brachyantha 22 Malo sina 33 21
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 97 50
No Yes Oryza sativa v193 Rice 97 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 47 28
No Yes Panicum virgatum v202 Switchgrass 84 50
No Yes Setaria italica v164 Foxtail millet 55 31
No Yes Zea mays subsp. mays Maize 138 68
No Yes Zea mays v181 Maize 173 84
No Yes Sorghum bicolor Sorghum 31 17
No Yes Musa balbisiana Balbis banana 66 32
No Yes Musa acuminata 22 Wild Malaysian banana 77 36
No Yes Amborella trichopoda 22   23 15
No Yes Physcomitrella patens   24 18
No Yes Coccomyxa subellipsoidea sp. C-169 v2   8 5
No Yes Asterochloris sp. Cgr/DA1pho v1.0   5 2
No Yes Chlorella variabilis sp. NC64A   15 7
No Yes Chlorella vulgaris   7 4
No Yes Volvox carteri f. nagariensis   3 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   7 6
No Yes Ostreococcus sp. RCC809   7 5
No Yes Ostreococcus lucimarinus CCE9901   4 2
No Yes Ostreococcus tauri   6 4
No Yes Bathycoccus prasinos   6 4
No Yes Micromonas sp. RCC299   25 18
No Yes Micromonas pusilla CCMP1545 v3.0   24 18
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   13 9
No Yes Bigelowiella natans CCMP2755 22   50 37
No Yes Cyanophora paradoxa   1 1
No Yes Leishmania mexicana 2.4   15 7
No Yes Leishmania major strain Friedlin   14 7
No Yes Leishmania infantum JPCM5 2.4   17 9
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   16 8
No Yes Trypanosoma vivax   13 9
No Yes Trypanosoma cruzi strain CL Brener   10 5
No Yes Trypanosoma congolense 2.4   15 8
No Yes Trypanosoma brucei gambiense v4.1   15 6
No Yes Trypanosoma brucei TREU927 v4.1   15 6
No Yes Ectocarpus siliculosus   28 20
No Yes Aureococcus anophagefferens   11 7
No Yes Albugo laibachii 22   14 13
No Yes Pythium iwayamai DAOM BR242034 22   19 17
No Yes Pythium arrhenomanes ATCC 12531 22   17 15
No Yes Pythium ultimum v1.7-2   20 19
No Yes Pythium aphanidermatum DAOM BR444 22   16 16
No Yes Pythium irregulare DAOM BR486 22   19 19
No Yes Pythium vexans DAOM BR484 22   24 21
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 15 13
No Yes Phytophthora sojae 1.1   19 17
No Yes Phytophthora infestans T30-4   22 19
No Yes Phytophthora capsici   11 9
No Yes Hyaloperonospora arabidopsidis 22   17 12
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   8 8
No Yes Thalassiosira pseudonana CCMP1335   8 8
No Yes Perkinsus marinus ATCC 50983   24 17
No Yes Paramecium tetraurelia   24 22
No Yes Tetrahymena thermophila SB210 1   8 7
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   2 2
No Yes Cryptosporidium parvum Iowa II   2 2
No Yes Neospora caninum   6 4
No Yes Toxoplasma gondii VEG   6 4
No Yes Toxoplasma gondii ME49   6 4
No Yes Toxoplasma gondii GT1   6 4
No Yes Babesia bovis T2Bo   6 4
No Yes Theileria parva   2 2
No Yes Theileria annulata   3 2
No Yes Plasmodium falciparum 3D7   4 3
No Yes Plasmodium vivax SaI-1 7.0   4 3
No Yes Plasmodium knowlesi strain H   4 3
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   4 3
No Yes Plasmodium berghei ANKA   3 2
No Yes Symbiodinium minutum clade B1 v1.2   82 48
No Yes Naegleria gruberi   2 2
No Yes Guillardia theta CCMP2712 v1.0   16 10
No Yes Emiliania huxleyi CCMP1516   57 44
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Eubacterium siraeum   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Natronomonas pharaonis DSM 2160   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 64 45
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 42 24
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 18 12
No Yes Ascaris suum Victoria/Ghent Pig roundworm 11 8
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 14 13
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb01   4 3
No Yes Paracoccidioides brasiliensis Pb03   3 2
No Yes Coccidioides posadasii str. Silveira   5 3
No Yes Coccidioides immitis RMSCC 3703   4 2
No Yes Coccidioides immitis RMSCC 2394   5 3
No Yes Coccidioides immitis H538.4   4 2
No Yes Ajellomyces dermatitidis ER-3   5 4
No Yes Histoplasma capsulatum H143   4 4
No Yes Histoplasma capsulatum H88   5 4
No Yes Histoplasma capsulatum G186AR   5 4
No Yes Aspergillus fumigatus A1163   3 2
No Yes Candida albicans WO-1   3 2
No Yes Saccharomyces cerevisiae UC5   3 2
No Yes Saccharomyces cerevisiae PW5   3 2
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   3 2
No Yes Saccharomyces cerevisiae FostersB   2 2
No Yes Saccharomyces cerevisiae VL3   3 2
No Yes Saccharomyces cerevisiae Vin13   3 2
No Yes Saccharomyces cerevisiae LalvinQA23   3 2
No Yes Saccharomyces cerevisiae Sigma1278b   3 2
No Yes Saccharomyces cerevisiae W303   3 2
No Yes Saccharomyces cerevisiae JAY291   3 2
No Yes Saccharomyces cerevisiae AWRI1631   3 2
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   3 2
No Yes Saccharomyces cerevisiae YJM789   3 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 3 2
No Yes Schizosaccharomyces pombe 972h-   3 1
No Yes Batrachochytrium dendrobatidis JEL423   9 5
No Yes Batrachochytrium dendrobatidis JAM81   10 6
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 34 19
No Yes Hordeum vulgare 22 Domesticated barley 116 60
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 34 19
No Yes Trypanosoma brucei Lister 427 v4.1   15 6
No Yes Neospora caninum Nc-Liverpool 6.2   6 4
No Yes Plasmodium falciparum HB3   3 3
No Yes Plasmodium falciparum Dd2   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Desulfitobacterium hafniense DCB-2   2 2
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 107 88
No Yes Homo sapiens (NCBI version) Human 52 38
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 34 23
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 10 8
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 11 8
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 9 6
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 6 3
No Yes Lotus japonicus (Early assembly)   24 16
No Yes Malus x domestica (Duplicate) Apple 67 40
No Yes Ricinus communis (Early assembly) Castor bean 35 20
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   63 39
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 32 19
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 33 20
No Yes Phoenix dactylifera (Early draft) Date palm 21 13
No Yes Homo sapiens 69_37 Human 35 22
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 30 19
No Yes Gorilla gorilla 69_3.1 Western gorilla 29 21
No Yes Pongo abelii 69_2 Sumatran orangutan 35 21
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 32 21
No Yes Macaca mulatta 69_1 Rhesus monkey 36 22
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 46 31
No Yes Otolemur garnettii 69_3 Small-eared galago 34 22
No Yes Microcebus murinus 69_1 Gray mouse lemur 23 14
No Yes Rattus norvegicus 69_3.4 Norway rat 38 26
No Yes Mus musculus 69_38 House mouse 34 23
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 27 15
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 34 22
No Yes Cavia porcellus 69_3 Domestic guinea pig 30 22
No Yes Oryctolagus cuniculus 69_2 Rabbit 33 23
No Yes Ochotona princeps 69 American pika 27 15
No Yes Tupaia belangeri 69 Northern tree shrew 13 10
No Yes Sus scrofa 69_10.2 Pig 34 21
No Yes Bos taurus 69_3.1 Cattle 30 20
No Yes Vicugna pacos 69_1 Alpaca 21 13
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 27 19
No Yes Mustela putorius furo 69_1.0 Domestic ferret 32 21
No Yes Ailuropoda melanoleuca 69_1 Giant panda 37 24
No Yes Canis familiaris 69_3.1 Dog 39 26
No Yes Felis catus 69 Domestic cat 18 12
No Yes Equus caballus 69_2 Horse 30 20
No Yes Myotis lucifugus 69_2.0 Little brown bat 35 22
No Yes Pteropus vampyrus 69_1 Large flying fox 26 17
No Yes Sorex araneus 69_1 European shrew 21 16
No Yes Erinaceus europaeus 69 Western European hedgehog 25 18
No Yes Procavia capensis 69_1 Cape rock hyrax 25 15
No Yes Loxodonta africana 69_3 African savanna elephant 33 22
No Yes Echinops telfairi 69 Small Madagascar hedgehog 30 21
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 20 13
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 37 18
No Yes Macropus eugenii 69_1.0 Tammar wallaby 20 13
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 31 20
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 31 22
No Yes Ornithorhynchus anatinus 69_5 Platypus 27 15
No Yes Petromyzon marinus 69_7.0 Sea lamprey 18 12
No Yes Meleagris gallopavo 69_2 Turkey 22 14
No Yes Gallus gallus 69_2 Chicken 19 14
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 22 15
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 25 15
No Yes Anolis carolinensis 69_2.0 Green anole 32 21
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 27 18
No Yes Latimeria chalumnae 69_1 Coelacanth 36 22
No Yes Gadus morhua 69_1 Atlantic cod 29 22
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 30 24
No Yes Takifugu rubripes 69_4 Torafugu 32 23
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 34 24
No Yes Oryzias latipes 69_1 Japanese medaka 37 25
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 36 24
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 39 26
No Yes Danio rerio 69_9 Zebrafish 33 24
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 2
No Yes Ciona intestinalis 69 Vase tunicate 12 7
No Yes Drosophila melanogaster 69_5 Fruit fly 19 12
No Yes Caenorhabditis elegans 69_215 Roundworm 8 7
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 3 2
No Yes Arabidopsis thaliana 10 Thale cress 34 18
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes NCBI 2017_08 genome   28308 18175
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   157 95
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   1756 1160
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   22767 15109
No Yes Global Ocean Sampling Expedition (GOS)   166 126
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   64 60
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   74 74
No Yes TargetDB (Targets)   66 48

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