SUPERFAMILY 1.75 HMM library and genome assignments server

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PLP-binding barrel superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Candidatus Caldiarchaeum subterraneum


gi|557694103|ref|YP_008797157.1|


Candidatus Korarchaeum cryptofilum OPF8


gi|170290535|ref|YP_001737351.1|

gi|170290124|ref|YP_001736940.1|


Fervidicoccus fontis Kam940


gi|385806275|ref|YP_005842673.1|


Thermogladius cellulolyticus 1633


gi|389861170|ref|YP_006363410.1|


Thermosphaera aggregans DSM 11486


gi|296242242|ref|YP_003649729.1|


Staphylothermus hellenicus DSM 12710


gi|297526616|ref|YP_003668640.1|


Staphylothermus marinus F1


gi|126465116|ref|YP_001040225.1|


Desulfurococcus fermentans DSM 16532


gi|390938585|ref|YP_006402323.1|


Desulfurococcus kamchatkensis 1221n


gi|218883962|ref|YP_002428344.1|


Desulfurococcus mucosus DSM 2162


gi|320100688|ref|YP_004176280.1|


Vulcanisaeta moutnovskia 768-28


gi|325968867|ref|YP_004245059.1|


Vulcanisaeta distributa DSM 14429


gi|307594424|ref|YP_003900741.1|


Caldivirga maquilingensis IC-167


gi|159041106|ref|YP_001540358.1|


halophilic archaeon DL31


gi|345004101|ref|YP_004806954.1|

gi|345006445|ref|YP_004809298.1|


Methanocella arvoryzae MRE50


gi|147919802|ref|YP_686452.1|


Methanocella conradii HZ254


gi|383319840|ref|YP_005380681.1|


Methanocella paludicola SANAE


gi|282163529|ref|YP_003355914.1|


Methanosaeta harundinacea 6Ac


gi|386000834|ref|YP_005919133.1|

gi|386002817|ref|YP_005921116.1|


Methanosaeta thermophila PT


gi|116754057|ref|YP_843175.1|

gi|116754830|ref|YP_843948.1|


Methanosaeta concilii GP6


gi|330507768|ref|YP_004384196.1|

gi|330508848|ref|YP_004385276.1|


Methanosalsum zhilinae DSM 4017


gi|336476631|ref|YP_004615772.1|

gi|336477471|ref|YP_004616612.1|


Methanohalobium evestigatum Z-7303


gi|298675499|ref|YP_003727249.1|


Methanococcoides burtonii DSM 6242


gi|91773052|ref|YP_565744.1|

gi|91772657|ref|YP_565349.1|

gi|91773808|ref|YP_566500.1|


Methanosarcina acetivorans C2A


gi|20089382|ref|NP_615457.1|

gi|20091552|ref|NP_617627.1|

gi|20089611|ref|NP_615686.1|


Methanosarcina mazei Go1


gi|21227777|ref|NP_633699.1|

gi|21229287|ref|NP_635209.1|

gi|21227987|ref|NP_633909.1|