SUPERFAMILY 1.75 HMM library and genome assignments server

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Probable bacterial effector-binding domain superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Burkholderia cenocepacia HI2424


gi|116688150|ref|YP_833773.1|


Burkholderia multivorans ATCC 17616


gi|189351923|ref|YP_001947551.1|


Burkholderia gladioli BSR3


gi|330815060|ref|YP_004358765.1|


Delftia acidovorans SPH-1


gi|160898540|ref|YP_001564122.1|


Variovorax paradoxus S110


gi|239814830|ref|YP_002943740.1|


Acidovorax ebreus TPSY


gi|222109410|ref|YP_002551674.1|


Acidovorax sp. KKS102


gi|407939765|ref|YP_006855406.1|

gi|407937003|ref|YP_006852644.1|


Acidovorax sp. JS42


gi|121592606|ref|YP_984502.1|


Acidovorax citrulli AAC00-1


gi|120613240|ref|YP_972918.1|


Acidovorax avenae subsp. avenae ATCC 19860


gi|326316821|ref|YP_004234493.1|

gi|326319315|ref|YP_004236987.1|


Collimonas fungivorans Ter331


gi|340788367|ref|YP_004753832.1|


Herbaspirillum seropedicae SmR1


gi|300313268|ref|YP_003777360.1|


Advenella kashmirensis WT001


gi|389873858|ref|YP_006381277.1|


Bordetella petrii DSM 12804


gi|163854323|ref|YP_001628621.1|

gi|163855242|ref|YP_001629540.1|


Bordetella avium 197N


gi|187479869|ref|YP_787894.1|


Bordetella pertussis Tohama I


gi|33591693|ref|NP_879337.1|


Bordetella parapertussis 12822


gi|33598876|ref|NP_886519.1|


Bordetella bronchiseptica RB50


gi|33603953|ref|NP_891513.1|


Achromobacter xylosoxidans A8


gi|311103265|ref|YP_003976118.1|

gi|311103915|ref|YP_003976768.1|


Achromobacter xylosoxidans


gi|528983950|ref|YP_008029267.1|


Methylotenera mobilis JLW8


gi|253995427|ref|YP_003047491.1|


Methylovorus sp. MP688


gi|313202149|ref|YP_004040807.1|

gi|313202260|ref|YP_004040918.1|


Methylovorus glucosetrophus SIP3-4


gi|254000184|ref|YP_003052247.1|

gi|254000303|ref|YP_003052366.1|


Methylobacillus flagellatus KT


gi|91776783|ref|YP_546539.1|


Parvularcula bermudensis HTCC2503


gi|304320034|ref|YP_003853677.1|