SUPERFAMILY 1.75 HMM library and genome assignments server

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GlnB-like superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Methanomethylovorans hollandica DSM 15978


gi|435851244|ref|YP_007312830.1|

gi|435850855|ref|YP_007312441.1|

gi|435852329|ref|YP_007313915.1|

gi|435850746|ref|YP_007312332.1|

gi|435850331|ref|YP_007311917.1|

gi|435852161|ref|YP_007313747.1|


Methanolobus psychrophilus R15


gi|410670543|ref|YP_006922914.1|

gi|410670268|ref|YP_006922639.1|

gi|410672039|ref|YP_006924410.1|

gi|410670547|ref|YP_006922918.1|

gi|410670548|ref|YP_006922919.1|

gi|410671298|ref|YP_006923669.1|

gi|410671095|ref|YP_006923466.1|

gi|410669544|ref|YP_006921915.1|

gi|410670008|ref|YP_006922379.1|

gi|410669237|ref|YP_006921608.1|


Methanosarcina mazei Tuc01


gi|452209546|ref|YP_007489660.1|

gi|452209316|ref|YP_007489430.1|

gi|452209308|ref|YP_007489422.1|

gi|452209307|ref|YP_007489421.1|

gi|452211516|ref|YP_007491630.1|

gi|452209511|ref|YP_007489625.1|

gi|452210076|ref|YP_007490190.1|


Methanoregula formicica Methanoregula formicicum SMSP


gi|432330635|ref|YP_007248778.1|

gi|432330179|ref|YP_007248322.1|

gi|432331681|ref|YP_007249824.1|

gi|432329482|ref|YP_007247625.1|

gi|432330636|ref|YP_007248779.1|


Archaeoglobus sulfaticallidus PM70-1


gi|488600460|ref|YP_007906931.1|

gi|488601557|ref|YP_007908028.1|

gi|488601559|ref|YP_007908030.1|

gi|488600047|ref|YP_007906518.1|

gi|488601149|ref|YP_007907620.1|


Thermococcus sp. AM4


gi|223478343|ref|YP_002582719.1|

gi|223477431|ref|YP_002582051.1|


Thermococcus sp. CL1


gi|390960713|ref|YP_006424547.1|

gi|390962041|ref|YP_006425875.1|

gi|390961389|ref|YP_006425223.1|


Thermococcus litoralis DSM 5473


gi|530547509|ref|YP_008428037.1|

gi|530549940|ref|YP_008430496.1|

gi|530547890|ref|YP_008428422.1|


Pyrococcus sp. NA2


gi|332159154|ref|YP_004424433.1|

gi|332157734|ref|YP_004423013.1|


Pyrococcus furiosus DSM 3638


gi|18977403|ref|NP_578760.1|

gi|18977608|ref|NP_578965.1|


Candidatus Methanomethylophilus alvus Mx1201


gi|478483434|ref|YP_007714084.1|

gi|478483343|ref|YP_007713993.1|

gi|478482513|ref|YP_007713163.1|


Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1


gi|511059943|ref|YP_008071828.1|

gi|511060240|ref|YP_008072125.1|


Halovivax ruber XH-70


gi|433637276|ref|YP_007283036.1|


Natrinema pellirubrum DSM 15624


gi|433592954|ref|YP_007282450.1|

gi|433591634|ref|YP_007281130.1|

gi|433589467|ref|YP_007278963.1|


Natronococcus occultus SP4


gi|435849221|ref|YP_007311471.1|

gi|435846992|ref|YP_007309242.1|

gi|435849208|ref|YP_007311458.1|


Natronobacterium gregoryi SP2


gi|429191443|ref|YP_007177121.1|

gi|429192845|ref|YP_007178523.1|

gi|429191758|ref|YP_007177436.1|


Haloquadratum walsbyi C23


gi|385804883|ref|YP_005841283.1|

gi|385803328|ref|YP_005839728.1|

gi|385804850|ref|YP_005841250.1|


Halorhabdus tiamatea SARL4B


gi|529077681|ref|YP_008376684.1|

gi|529077957|ref|YP_008376960.1|


Natronomonas moolapensis 8.8.11


gi|452208581|ref|YP_007488703.1|

gi|452208266|ref|YP_007488388.1|

gi|452205987|ref|YP_007486109.1|


Haloarcula hispanica N601


gi|564291193|ref|YP_008877530.1|

gi|564287515|ref|YP_008873712.1|

gi|564288435|ref|YP_008874637.1|


Methanococcus maripaludis X1


gi|340623247|ref|YP_004741700.1|

gi|340623249|ref|YP_004741702.1|

gi|340623250|ref|YP_004741703.1|

gi|340624152|ref|YP_004742605.1|

gi|340624153|ref|YP_004742606.1|

gi|340624593|ref|YP_004743046.1|

gi|340624483|ref|YP_004742936.1|

gi|340624246|ref|YP_004742699.1|


Methanococcus maripaludis C6


gi|159905271|ref|YP_001548933.1|

gi|159905269|ref|YP_001548931.1|

gi|159905268|ref|YP_001548930.1|

gi|159905266|ref|YP_001548928.1|

gi|159906183|ref|YP_001549845.1|

gi|159906182|ref|YP_001549844.1|

gi|159905779|ref|YP_001549441.1|

gi|159905891|ref|YP_001549553.1|

gi|159906090|ref|YP_001549752.1|


Methanococcus maripaludis C7


gi|150402984|ref|YP_001330278.1|

gi|150402986|ref|YP_001330280.1|

gi|150402987|ref|YP_001330281.1|

gi|150402989|ref|YP_001330283.1|

gi|150402026|ref|YP_001329320.1|

gi|150402027|ref|YP_001329321.1|

gi|150402448|ref|YP_001329742.1|

gi|150402337|ref|YP_001329631.1|

gi|150402121|ref|YP_001329415.1|


Methanococcus maripaludis S2


gi|45357627|ref|NP_987184.1|

gi|45357629|ref|NP_987186.1|

gi|45357630|ref|NP_987187.1|

gi|45358417|ref|NP_987974.1|

gi|45358418|ref|NP_987975.1|

gi|45358841|ref|NP_988398.1|

gi|45358726|ref|NP_988283.1|

gi|45358510|ref|NP_988067.1|

gi|45358181|ref|NP_987738.1|


Methanobacterium sp. SWAN-1


gi|333988001|ref|YP_004520608.1|

gi|333987999|ref|YP_004520606.1|

gi|333988215|ref|YP_004520822.1|

gi|333986322|ref|YP_004518929.1|

gi|333988216|ref|YP_004520823.1|

gi|333986325|ref|YP_004518932.1|

gi|333988005|ref|YP_004520612.1|

gi|333988223|ref|YP_004520830.1|