SUPERFAMILY 1.75 HMM library and genome assignments server

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Probable bacterial effector-binding domain superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Bacillus halodurans C-125


gi|15616058|ref|NP_244363.1|

gi|15612964|ref|NP_241267.1|

gi|15616609|ref|NP_244915.1|

gi|15616068|ref|NP_244373.1|

gi|15616196|ref|NP_244501.1|

gi|15613157|ref|NP_241460.1|

gi|15616195|ref|NP_244500.1|

gi|15613233|ref|NP_241536.1|

gi|15615780|ref|NP_244084.1|

gi|15614682|ref|NP_242985.1|

gi|15616571|ref|NP_244877.1|


Bacillus weihenstephanensis KBAB4


gi|163939516|ref|YP_001644400.1|

gi|163940775|ref|YP_001645659.1|

gi|163942569|ref|YP_001647453.1|

gi|163939016|ref|YP_001643900.1|

gi|163942643|ref|YP_001647527.1|

gi|163941125|ref|YP_001646009.1|

gi|163940943|ref|YP_001645827.1|


Bacillus thuringiensis str. Al Hakam


gi|118477148|ref|YP_894299.1|

gi|118478368|ref|YP_895519.1|

gi|118479955|ref|YP_897106.1|

gi|118476707|ref|YP_893858.1|

gi|118478100|ref|YP_895251.1|

gi|118480020|ref|YP_897171.1|

gi|118477971|ref|YP_895122.1|


Bacillus cereus 03BB102


gi|225863569|ref|YP_002748947.1|

gi|225865013|ref|YP_002750391.1|

gi|225866834|ref|YP_002752212.1|

gi|225863071|ref|YP_002748449.1|

gi|225864708|ref|YP_002750086.1|

gi|225866904|ref|YP_002752282.1|

gi|225864556|ref|YP_002749934.1|


Bacillus anthracis str. A0248


gi|229601522|ref|YP_002866113.1|

gi|229604371|ref|YP_002867283.1|

gi|229602212|ref|YP_002869104.1|

gi|229601641|ref|YP_002865647.1|

gi|229601660|ref|YP_002867016.1|

gi|229600346|ref|YP_002869173.1|

gi|229602925|ref|YP_002866888.1|

gi|229602127|ref|YP_002865610.1|


Bacillus pseudofirmus OF4


gi|288556506|ref|YP_003428441.1|

gi|288554279|ref|YP_003426214.1|

gi|288557191|ref|YP_003429258.1|


Bacillus clausii KSM-K16


gi|56963727|ref|YP_175458.1|

gi|56964557|ref|YP_176288.1|

gi|56965737|ref|YP_177471.1|

gi|56962264|ref|YP_173988.1|

gi|56965304|ref|YP_177036.1|


Bacillus cellulosilyticus DSM 2522


gi|317127724|ref|YP_004094006.1|

gi|317127313|ref|YP_004093595.1|

gi|317127824|ref|YP_004094106.1|

gi|317127672|ref|YP_004093954.1|


Bacillus pumilus SAFR-032


gi|157691374|ref|YP_001485836.1|

gi|157691926|ref|YP_001486388.1|

gi|157692609|ref|YP_001487071.1|

gi|157692587|ref|YP_001487049.1|

gi|157691542|ref|YP_001486004.1|


Bacillus megaterium DSM 319


gi|295705883|ref|YP_003598958.1|

gi|295705297|ref|YP_003598372.1|

gi|295702493|ref|YP_003595568.1|

gi|295705050|ref|YP_003598125.1|

gi|295705825|ref|YP_003598900.1|


Bacillus coagulans 2-6


gi|336114825|ref|YP_004569592.1|


Macrococcus caseolyticus JCSC5402


gi|222151403|ref|YP_002560559.1|


Staphylococcus pseudintermedius HKU10-03


gi|319892490|ref|YP_004149365.1|


Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305


gi|73661787|ref|YP_300568.1|

gi|73662556|ref|YP_301337.1|


Staphylococcus lugdunensis HKU09-01


gi|289549942|ref|YP_003470846.1|

gi|289550721|ref|YP_003471625.1|


Staphylococcus haemolyticus JCSC1435


gi|70727078|ref|YP_253992.1|

gi|70725627|ref|YP_252541.1|

gi|70726411|ref|YP_253325.1|


Staphylococcus epidermidis RP62A


gi|57866270|ref|YP_187934.1|

gi|57866989|ref|YP_188646.1|


Staphylococcus carnosus subsp. carnosus TM300


gi|224476360|ref|YP_002633966.1|

gi|224476618|ref|YP_002634224.1|


Staphylococcus aureus subsp. aureus JH1


gi|150394946|ref|YP_001317621.1|

gi|150394055|ref|YP_001316730.1|


Staphylococcus aureus


gi|470225471|ref|YP_007624050.1|

gi|470224807|ref|YP_007623386.1|


Gemmatimonas aurantiaca T-27


gi|226229083|ref|YP_002763189.1|


Pelodictyon phaeoclathratiforme BU-1


gi|194337776|ref|YP_002019570.1|


Chlorobium chlorochromatii CaD3


gi|78188677|ref|YP_379015.1|


Chlorobium phaeobacteroides DSM 266


gi|119358334|ref|YP_912978.1|

gi|119356146|ref|YP_910790.1|


Chlorobaculum parvum NCIB 8327


gi|193213503|ref|YP_001999456.1|