SUPERFAMILY 1.75 HMM library and genome assignments server

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Transposase IS200-like superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Desulfurococcus kamchatkensis 1221n


gi|218883992|ref|YP_002428374.1|


Metallosphaera sedula DSM 5348


gi|146304933|ref|YP_001192249.1|


Sulfolobus tokodaii str. 7


gi|15921350|ref|NP_377019.1|

gi|15920220|ref|NP_375889.1|

gi|15922887|ref|NP_378556.1|

gi|15922219|ref|NP_377888.1|

gi|15921416|ref|NP_377085.1|

gi|15920902|ref|NP_376571.1|

gi|15921300|ref|NP_376969.1|


Sulfolobus solfataricus P2


gi|15898306|ref|NP_342911.1|

gi|15898637|ref|NP_343242.1|


Vulcanisaeta moutnovskia 768-28


gi|325969404|ref|YP_004245596.1|


halophilic archaeon DL31


gi|345005406|ref|YP_004808259.1|


Methanocella conradii HZ254


gi|383320763|ref|YP_005381604.1|

gi|383319119|ref|YP_005379960.1|


Methanosaeta harundinacea 6Ac


gi|386002873|ref|YP_005921172.1|


Methanosaeta concilii GP6


gi|330507014|ref|YP_004383442.1|

gi|330508290|ref|YP_004384718.1|

gi|330506825|ref|YP_004383253.1|

gi|330508224|ref|YP_004384652.1|

gi|330506951|ref|YP_004383379.1|

gi|330508966|ref|YP_004385394.1|


Methanosalsum zhilinae DSM 4017


gi|336476750|ref|YP_004615891.1|


Methanohalobium evestigatum Z-7303


gi|298675684|ref|YP_003727434.1|

gi|298675332|ref|YP_003727082.1|


Methanosarcina acetivorans C2A


gi|20089155|ref|NP_615230.1|

gi|20092176|ref|NP_618251.1|


Methanosarcina mazei Go1


gi|21229139|ref|NP_635061.1|

gi|21227831|ref|NP_633753.1|

gi|21228406|ref|NP_634328.1|

gi|21226457|ref|NP_632379.1|

gi|21229008|ref|NP_634930.1|

gi|21228541|ref|NP_634463.1|

gi|21227986|ref|NP_633908.1|

gi|21228901|ref|NP_634823.1|

gi|21226889|ref|NP_632811.1|

gi|21227871|ref|NP_633793.1|

gi|21226524|ref|NP_632446.1|

gi|21228827|ref|NP_634749.1|

gi|21229038|ref|NP_634960.1|

gi|21228831|ref|NP_634753.1|


Methanosarcina barkeri str. Fusaro


gi|73671161|ref|YP_307176.1|

gi|73669999|ref|YP_306014.1|

gi|73668777|ref|YP_304792.1|

gi|73670559|ref|YP_306574.1|

gi|73670109|ref|YP_306124.1|

gi|73668722|ref|YP_304737.1|

gi|73667992|ref|YP_304007.1|

gi|73670070|ref|YP_306085.1|

gi|73668175|ref|YP_304190.1|

gi|73668197|ref|YP_304212.1|

gi|73671128|ref|YP_307143.1|

gi|73669164|ref|YP_305179.1|

gi|73670067|ref|YP_306082.1|

gi|73670348|ref|YP_306363.1|

gi|73663840|ref|YP_300086.1|

gi|73670164|ref|YP_306179.1|

gi|73670504|ref|YP_306519.1|

gi|73668550|ref|YP_304565.1|

gi|73670685|ref|YP_306700.1|

gi|73670686|ref|YP_306701.1|


Archaeoglobus profundus DSM 5631


gi|284161541|ref|YP_003400164.1|


Thermococcus kodakarensis KOD1


gi|57640867|ref|YP_183345.1|


Thermococcus sibiricus MM 739


gi|242398252|ref|YP_002993676.1|


Pyrococcus yayanosii CH1


gi|337283952|ref|YP_004623426.1|

gi|337283551|ref|YP_004623025.1|


Thermoplasma volcanium GSS1


gi|13541674|ref|NP_111362.1|

gi|13541300|ref|NP_110988.1|

gi|13541581|ref|NP_111269.1|


Thermoplasma acidophilum DSM 1728


gi|16081593|ref|NP_393952.1|


Natrialba magadii ATCC 43099


gi|289937586|ref|YP_003482188.1|


Halorubrum lacusprofundi ATCC 49239


gi|222476123|ref|YP_002564644.1|

gi|222479556|ref|YP_002565793.1|

gi|222478872|ref|YP_002565109.1|

gi|222478851|ref|YP_002565088.1|

gi|222478863|ref|YP_002565100.1|

gi|222480975|ref|YP_002567212.1|

gi|222481246|ref|YP_002567482.1|

gi|222475847|ref|YP_002564368.1|

gi|222475796|ref|YP_002564317.1|


Haloquadratum walsbyi DSM 16790


gi|110667283|ref|YP_657094.1|


Halogeometricum borinquense DSM 11551


gi|313125023|ref|YP_004035287.1|

gi|313126333|ref|YP_004036603.1|


Haloferax mediterranei ATCC 33500


gi|389845670|ref|YP_006347909.1|