SUPERFAMILY 1.75 HMM library and genome assignments server

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L,D-transpeptidase catalytic domain-like superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Capitella sp. I


jgi|Capca1|202391|fgenesh1_pg.C_scaffold_40273000001


Caenorhabditis japonica


CJA22751

CJA23239

CJA21372

CJA23875

CJA23610

CJA27714


Nematostella vectensis 1.0


jgi|Nemve1|99081|e_gw.52.312.1


Amphimedon queenslandica


Aqu1.209489|PACid:15708017


Dictyostelium discoideum


DDB0308739|DDB_G0279747


Dictyostelium purpureum


jgi|Dicpu1|157221|GID1.0047875


Thecamonas trahens ATCC 50062


AMSG_10933T0


Naegleria gruberi


jgi|Naegr1|74461|fgeneshNG_pg.scaffold_70000051


Thermobaculum terrenum ATCC BAA-798


gi|269925164|ref|YP_003321787.1|

gi|269926314|ref|YP_003322937.1|


Leptolyngbya sp. PCC 7376


gi|427725720|ref|YP_007072997.1|


Pseudanabaena sp. PCC 7367


gi|428217510|ref|YP_007101975.1|

gi|428217798|ref|YP_007102263.1|

gi|428216883|ref|YP_007101348.1|


Acaryochloris marina MBIC11017


gi|158334425|ref|YP_001515597.1|

gi|158334241|ref|YP_001515413.1|


Synechocystis sp. PCC 6803


gi|16331947|ref|NP_442675.1|

gi|16331313|ref|NP_442041.1|


Thermosynechococcus sp. NK55


gi|571027028|ref|YP_008899146.1|


Thermosynechococcus elongatus BP-1


gi|22298230|ref|NP_681477.1|

gi|22298228|ref|NP_681475.1|


Synechococcus sp. PCC 7502


gi|428221823|ref|YP_007105993.1|


Synechococcus sp. PCC 6312


gi|427711806|ref|YP_007060430.1|

gi|427712321|ref|YP_007060945.1|


Synechococcus sp. CC9311


gi|113953250|ref|YP_731240.1|

gi|113952862|ref|YP_731601.1|

gi|113953098|ref|YP_729813.1|

gi|113952854|ref|YP_730932.1|

gi|113955394|ref|YP_730733.1|

gi|113953578|ref|YP_730086.1|


Synechococcus elongatus PCC 7942


gi|81299458|ref|YP_399666.1|


Microcoleus sp. PCC 7113


gi|428313308|ref|YP_007124285.1|

gi|428312477|ref|YP_007123454.1|

gi|428309059|ref|YP_007120036.1|

gi|428311661|ref|YP_007122638.1|


Trichodesmium erythraeum IMS101


gi|113475770|ref|YP_721831.1|

gi|113478276|ref|YP_724337.1|

gi|113475771|ref|YP_721832.1|


Geitlerinema sp. PCC 7407


gi|428223623|ref|YP_007107720.1|

gi|428226440|ref|YP_007110537.1|


Cyanothece sp. PCC 8802


gi|257062185|ref|YP_003140073.1|


Gloeocapsa sp. PCC 7428


gi|434392700|ref|YP_007127647.1|


cyanobacterium UCYN-A


gi|284929484|ref|YP_003422006.1|