SUPERFAMILY 1.75 HMM library and genome assignments server

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Tetracyclin repressor-like, C-terminal domain superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Capitella sp. I


jgi|Capca1|189685|fgenesh1_pg.C_scaffold_39090000001


Rhodnius prolixus 22


RPRC003770-PA


Caenorhabditis japonica


CJA28301

CJA23201

CJA22710

CJA22271

CJA19668

CJA19818

CJA23758

CJA29302


Caenorhabditis remanei


CRE23840


Thelohanellus kitauei


KII71945


Nematostella vectensis 1.0


jgi|Nemve1|225626|fgenesh1_pg.scaffold_9873000002


Aspergillus carbonarius ITEM 5010


jgi|Aspca1|32353|fgenesh1_pg.00546_#_1


Medicago truncatula


Medtr0803s0020.1


Physcomitrella patens


jgi|Phypa1_1|103150|fgenesh1_pg.scaffold_1398000001


Chlorella vulgaris


jgi|Chlvu1|17131|gw1.4.340.1


Phytophthora capsici


jgi|PhycaF7|117696|estExt_fgenesh1_pg.C_230263

jgi|PhycaF7|79836|fgenesh1_pg.C_scaffold_11000210

jgi|PhycaF7|83169|fgenesh1_pg.C_scaffold_330000005

jgi|PhycaF7|113902|estExt_fgenesh1_pg.C_60343

jgi|PhycaF7|75966|fgenesh1_pg.C_scaffold_3000097

jgi|PhycaF7|118511|estExt_fgenesh1_pg.C_819960001


Acholeplasma laidlawii PG-8A


ABX81120

ABX81391


Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)


gi|301631137|gb|XP_002944663|


Batrachochytrium dendrobatidis JAM81


jgi|Batde5|93146|GP3.087050


Oryza sativa ssp. Indica


OsIBSD048860

OsIBSD047188


Lotus japonicus


LjSGA_070220.1


Ricinus communis


31036.m000037

31795.m000031

35811.m000039

30901.m000032

28993.m000042

30367.m000020

50659.m000017

34270.m000027

33704.m000034

36563.m000017