SUPERFAMILY 1.75 HMM library and genome assignments server

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Ribulose-phoshate binding barrel superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Anolis carolinensis 76_2.0


ENSACAP00000010580

ENSACAP00000010169

ENSACAP00000000483

ENSACAP00000021780


Xenopus laevis


gi|52078454|gb|AAH82474|

gi|148230294|ref|NP_001087964|

gi|52221154|gb|AAH82707|

gi|148226353|ref|NP_001088036|


Xenopus tropicalis 76_4.2


ENSXETP00000040309

ENSXETP00000045872

ENSXETP00000054400


Latimeria chalumnae 76_1


ENSLACP00000003125

ENSLACP00000000039

ENSLACP00000001690


Lepisosteus oculatus 76


ENSLOCP00000005706

ENSLOCP00000006558

ENSLOCP00000006825


Gadus morhua 76_1


ENSGMOP00000004092

ENSGMOP00000008882

ENSGMOP00000000313


Tetraodon nigroviridis 76_8


ENSTNIP00000016952

ENSTNIP00000020180

ENSTNIP00000001173


Takifugu rubripes 76_4


ENSTRUP00000027085

ENSTRUP00000005501

ENSTRUP00000005500

ENSTRUP00000004724

ENSTRUP00000004723

ENSTRUP00000002028


Gasterosteus aculeatus 76_1


ENSGACP00000004997

ENSGACP00000010199

ENSGACP00000010222

ENSGACP00000016600


Oryzias latipes 76_1


ENSORLP00000022365

ENSORLP00000025462

ENSORLP00000022366

ENSORLP00000019436


Xiphophorus maculatus 76_4.4.2


ENSXMAP00000004258

ENSXMAP00000001815

ENSXMAP00000001018


Poecilia formosa 76


ENSPFOP00000001848

ENSPFOP00000004731

ENSPFOP00000011765


Oreochromis niloticus 76_1.0


ENSONIP00000020165

ENSONIP00000005499

ENSONIP00000004778

ENSONIP00000004777

ENSONIP00000005167

ENSONIP00000004410


Astyanax mexicanus 76


ENSAMXP00000000102

ENSAMXP00000001953

ENSAMXP00000002981


Danio rerio 76_9


ENSDARP00000023863

ENSDARP00000035728

ENSDARP00000117476

ENSDARP00000089698

ENSDARP00000097896


Oikopleura dioica


GSOIDT00015592001

GSOIDT00012327001


Ciona savignyi 76_2.0


ENSCSAVP00000008580

ENSCSAVP00000008582

ENSCSAVP00000008583

ENSCSAVP00000009265

ENSCSAVP00000009266

ENSCSAVP00000018443

ENSCSAVP00000008581

ENSCSAVP00000009855

ENSCSAVP00000009854

ENSCSAVP00000009264


Ciona intestinalis 76


ENSCINP00000013057

ENSCINP00000018707

ENSCINP00000010432

ENSCINP00000034654


Strongylocentrotus purpuratus v3.1


SPU_003135

SPU_001713


Adineta vaga


GSADVT00020724001

GSADVT00039027001

GSADVT00039799001

GSADVT00009235001

GSADVT00024197001


Octopus bimaculoides 280


Ocbimv22013895m.p

Ocbimv22032038m.p

Ocbimv22039175m.p

Ocbimv22028330m.p


Crassostrea gigas 22


EKC35033

EKC30314

EKC25210

EKC19736


Lottia gigantea


jgi|Lotgi1|230485|estExt_fgenesh2_pg.C_sca_120311

jgi|Lotgi1|232087|estExt_fgenesh2_pg.C_sca_250172

jgi|Lotgi1|217260|estExt_Genewise1Plus.C_sca_380065

jgi|Lotgi1|188821|estExt_Genewise1.C_sca_260096


Helobdella robusta


jgi|Helro1|74247

jgi|Helro1|185115


Capitella sp. I


jgi|Capca1|149571|estExt_Genewise1.C_1710063

jgi|Capca1|222963|estExt_fgenesh1_pg.C_30088

jgi|Capca1|222872|estExt_fgenesh1_pg.C_370053

jgi|Capca1|185550|fgenesh1_pg.C_scaffold_27162000001

jgi|Capca1|93663|e_gw1.39248.1.1

jgi|Capca1|192625|fgenesh1_pg.C_scaffold_27513000001

jgi|Capca1|150087|estExt_Genewise1.C_970067

jgi|Capca1|142382|e_gw1.4419.1.1

jgi|Capca1|201706|fgenesh1_pg.C_scaffold_2297000001