SUPERFAMILY 1.75 HMM library and genome assignments server

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Kazal-type serine protease inhibitors superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 18 SUPERFAMILY models representing the Kazal-type serine protease inhibitors superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0039232 2 2005-09-08 d1iw4a_ Ovomucoid domain III-like
0044002 842 2005-09-08 d1tgsi_ Ovomucoid domain III-like
0042251 855 2005-09-08 d1pcea_ Ovomucoid domain III-like
0053895 2290 2010-05-31 d2erwa1 Ovomucoid domain III-like
0040469 756 2005-09-08 d1ldtl_ Ovomucoid domain III-like
0045542 851 2005-09-08 d3ovoa_ Ovomucoid domain III-like
0038668 854 2005-09-08 d1hpta_ Ovomucoid domain III-like
0043934 838 2005-09-08 d1tbrr2 Ovomucoid domain III-like
0041571 674 2005-09-08 d1nuba3 Ovomucoid domain III-like
0051518 2766 2008-09-10 d1z7kb1 Ovomucoid domain III-like
0040148 854 2005-09-08 d1kmaa_ Ovomucoid domain III-like
0045399 788 2005-09-08 d2ovoa_ Ovomucoid domain III-like
0043933 860 2005-09-08 d1tbrr1 Ovomucoid domain III-like
0053900 2003 2010-05-31 d2f3ci1 Ovomucoid domain III-like
0040627 782 2005-09-08 d1lr7a2 Ovomucoid domain III-like
0046016 2695 2008-09-10 d1busa_ Ovomucoid domain III-like
0038364 520 2005-09-08 d1h0za_ Serine proteinase inhibitor lekti
0038552 221 2005-09-08 d1hdla_ Serine proteinase inhibitor lekti