SUPERFAMILY 1.75 HMM library and genome assignments server

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Insect pheromone/odorant-binding proteins superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 6 SUPERFAMILY models representing the Insect pheromone/odorant-binding proteins superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0048615 525 2008-09-10 d1ooha_ Insect pheromone/odorant-binding proteins
0049060 507 2008-09-10 d1qwva_ Insect pheromone/odorant-binding proteins
0046382 434 2008-09-10 d1dqea_ Insect pheromone/odorant-binding proteins
0048683 474 2008-09-10 d1p28a_ Insect pheromone/odorant-binding proteins
0046072 521 2008-09-10 d1c3za_ Insect pheromone/odorant-binding proteins
0049113 658 2008-09-10 d1r5ra_ Insect pheromone/odorant-binding proteins