SUPERFAMILY 1.75 HMM library and genome assignments server

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Annexin superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 16 SUPERFAMILY models representing the Annexin superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0035256 289 2005-09-08 d1axna_ Annexin
0047297 1019 2008-09-10 d1i4aa_ Annexin
0035089 290 2005-09-08 d1alaa_ Annexin
0040852 291 2005-09-08 d1m9ia1 Annexin
0036495 291 2005-09-08 d1dm5a_ Annexin
0053100 1020 2008-09-10 d2ie7a1 Annexin
0035227 290 2005-09-08 d1avca2 Annexin
0041163 285 2005-09-08 d1n00a_ Annexin
0035060 291 2005-09-08 d1aina_ Annexin
0038746 292 2005-09-08 d1hvda_ Annexin
0036466 283 2005-09-08 d1dk5a_ Annexin
0050389 1014 2008-09-10 d1w7ba_ Annexin
0035226 291 2005-09-08 d1avca1 Annexin
0040853 290 2005-09-08 d1m9ia2 Annexin
0038635 293 2005-09-08 d1hm6a_ Annexin
0053288 1014 2008-09-10 d2q4ca1 Annexin