SUPERFAMILY 1.75 HMM library and genome assignments server

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Regulator of G-protein signaling, RGS superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 9 SUPERFAMILY models representing the Regulator of G-protein signaling, RGS superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036467 381 2005-09-08 d1dk8a_ Regulator of G-protein signaling, RGS
0053167 1275 2008-09-10 d2jm5a1 Regulator of G-protein signaling, RGS
0038715 167 2005-09-08 d1htjf_ Regulator of G-protein signaling, RGS
0036068 396 2005-09-08 d1cmza_ Regulator of G-protein signaling, RGS
0041925 242 2005-09-08 d1omwa1 Regulator of G-protein signaling, RGS
0037735 356 2005-09-08 d1fqia_ Regulator of G-protein signaling, RGS
0035044 407 2005-09-08 d1agre_ Regulator of G-protein signaling, RGS
0054140 1153 2010-05-31 d2ik8b1 Regulator of G-protein signaling, RGS
0038947 264 2005-09-08 d1iapa_ Regulator of G-protein signaling, RGS