SUPERFAMILY 1.75 HMM library and genome assignments server

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GroES-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 36 SUPERFAMILY models representing the GroES-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0035135 378 2005-09-08 d1aono_ GroES
0042138 378 2005-09-08 d1p3ha_ GroES
0040476 378 2005-09-08 d1lepa_ GroES
0044967 377 2005-09-08 d1we3o_ GroES
0037912 7 2005-09-08 d1g31a_ GroES
0041738 466 2005-09-08 d1o89a1 Alcohol dehydrogenase-like, N-terminal domain
0046113 5457 2008-09-10 d1cdoa1 Alcohol dehydrogenase-like, N-terminal domain
0047235 993 2008-09-10 d1ht0a1 Alcohol dehydrogenase-like, N-terminal domain
0050001 4672 2008-09-10 d1uufa1 Alcohol dehydrogenase-like, N-terminal domain
0039779 1031 2005-09-08 d1jvba1 Alcohol dehydrogenase-like, N-terminal domain
0044605 674 2005-09-08 d1v3ua1 Alcohol dehydrogenase-like, N-terminal domain
0047104 740 2008-09-10 d1h2ba1 Alcohol dehydrogenase-like, N-terminal domain
0048672 5897 2008-09-10 d1p0fa1 Alcohol dehydrogenase-like, N-terminal domain
0036743 750 2005-09-08 d1e3ia1 Alcohol dehydrogenase-like, N-terminal domain
0042365 330 2005-09-08 d1pl7a1 Alcohol dehydrogenase-like, N-terminal domain
0046314 963 2008-09-10 d1deha1 Alcohol dehydrogenase-like, N-terminal domain
0047654 7131 2008-09-10 d1jqba1 Alcohol dehydrogenase-like, N-terminal domain
0050889 7732 2008-09-10 d1xa0a1 Alcohol dehydrogenase-like, N-terminal domain
0040817 902 2005-09-08 d1m6ha1 Alcohol dehydrogenase-like, N-terminal domain
0045092 14 2005-09-08 d1ykfa1 Alcohol dehydrogenase-like, N-terminal domain
0047232 1048 2008-09-10 d1hsoa1 Alcohol dehydrogenase-like, N-terminal domain
0049685 6207 2008-09-10 d1tt7a1 Alcohol dehydrogenase-like, N-terminal domain
0038267 20 2005-09-08 d1gu7a1 Alcohol dehydrogenase-like, N-terminal domain
0043275 567 2005-09-08 d1rjwa1 Alcohol dehydrogenase-like, N-terminal domain
0046724 5872 2008-09-10 d1f8fa1 Alcohol dehydrogenase-like, N-terminal domain
0047994 5845 2008-09-10 d1llua1 Alcohol dehydrogenase-like, N-terminal domain
0053618 28 2010-05-31 d1vj1a1 Alcohol dehydrogenase-like, N-terminal domain
0046252 814 2008-09-10 d1d1ta1 Alcohol dehydrogenase-like, N-terminal domain
0047480 7271 2008-09-10 d1iz0a1 Alcohol dehydrogenase-like, N-terminal domain
0050202 5798 2008-09-10 d1vj0a1 Alcohol dehydrogenase-like, N-terminal domain
0047181 926 2008-09-10 d1heta1 Alcohol dehydrogenase-like, N-terminal domain
0048862 5668 2008-09-10 d1q1na1 Alcohol dehydrogenase-like, N-terminal domain
0042905 96 2005-09-08 d1qora1 Alcohol dehydrogenase-like, N-terminal domain
0046449 1496 2008-09-10 d1e3ja1 Alcohol dehydrogenase-like, N-terminal domain
0047846 222 2008-09-10 d1kola1 Alcohol dehydrogenase-like, N-terminal domain
0051263 7780 2008-09-10 d1yb5a1 Alcohol dehydrogenase-like, N-terminal domain