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Ricin B-like lectins superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 34 SUPERFAMILY models representing the Ricin B-like lectins superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0046979 639 2008-09-10 d1ggpb1 Ricin B-like
0048824 917 2008-09-10 d1puub2 Ricin B-like
0054578 989 2010-05-31 d2q3nb1 Ricin B-like
0045755 637 2008-09-10 d1abrb1 Ricin B-like
0048609 1021 2008-09-10 d1onkb2 Ricin B-like
0049449 63 2008-09-10 d1sr4a_ Ricin B-like
0051735 918 2008-09-10 d2aaib2 Ricin B-like
0038759 297 2005-09-08 d1hwmb2 Ricin B-like
0047250 920 2008-09-10 d1hwmb1 Ricin B-like
0049064 390 2008-09-10 d1qxma2 Ricin B-like
0050137 698 2008-09-10 d1vcla2 Ricin B-like
0054803 624 2010-05-31 d2zqna1 Ricin B-like
0048624 931 2008-09-10 d1oqlb2 Ricin B-like
0049614 906 2008-09-10 d1tfmb2 Ricin B-like
0054136 771 2010-05-31 d2ihoa1 Ricin B-like
0044696 156 2005-09-08 d1vcla1 Ricin B-like
0048070 385 2008-09-10 d1m2tb1 Ricin B-like
0049283 880 2008-09-10 d1rzob2 Ricin B-like
0051734 754 2008-09-10 d2aaib1 Ricin B-like
0034987 356 2005-09-08 d1abrb2 Ricin B-like
0046980 771 2008-09-10 d1ggpb2 Ricin B-like
0049063 222 2008-09-10 d1qxma1 Ricin B-like
0050070 1441 2008-09-10 d1v6wa1 Ricin B-like
0054579 896 2010-05-31 d2q3nb2 Ricin B-like
0046119 914 2008-09-10 d1ce7b2 Ricin B-like
0048623 446 2008-09-10 d1oqlb1 Ricin B-like
0049451 21 2008-09-10 d1sr4c_ Ricin B-like
0052580 27 2008-09-10 d2f2fc1 Ricin B-like
0040751 282 2005-09-08 d1m2tb2 Ricin B-like
0047838 1414 2008-09-10 d1knma_ Ricin B-like
0049282 533 2008-09-10 d1rzob1 Ricin B-like
0050958 998 2008-09-10 d1xhba1 Ricin B-like
0046383 461 2008-09-10 d1dqga_ Cysteine rich domain
0049972 43 2008-09-10 d1upsa2 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain