SUPERFAMILY 1.75 HMM library and genome assignments server

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dUTPase-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 10 SUPERFAMILY models representing the dUTPase-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0037428 560 2005-09-08 d1f7ra_ dUTPase-like
0052042 553 2008-09-10 d2bsya2 dUTPase-like
0050315 1405 2008-09-10 d1vyqa1 dUTPase-like
0042623 491 2005-09-08 d1q5hc_ dUTPase-like
0036608 558 2005-09-08 d1duna_ dUTPase-like
0052041 959 2008-09-10 d2bsya1 dUTPase-like
0049409 1760 2008-09-10 d1sixa_ dUTPase-like
0041842 403 2005-09-08 d1ogha_ dUTPase-like
0051089 1371 2008-09-10 d1xs1a_ dUTPase-like
0049218 1627 2008-09-10 d1rnja_ dUTPase-like