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Aldolase superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 56 SUPERFAMILY models representing the Aldolase superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0041152 787 2005-09-08 d1mzha_ Class I aldolase
0046338 2338 2008-09-10 d1dhpa_ Class I aldolase
0049382 332 2008-09-10 d1sfla_ Class I aldolase
0050278 1293 2008-09-10 d1vpxa_ Class I aldolase
0045763 814 2008-09-10 d1adoa_ Class I aldolase
0046689 813 2008-09-10 d1f2ja_ Class I aldolase
0048245 1131 2008-09-10 d1mxsa_ Class I aldolase
0049000 812 2008-09-10 d1qo5a_ Class I aldolase
0050181 1405 2008-09-10 d1vhca_ Class I aldolase
0051011 2356 2008-09-10 d1xkya1 Class I aldolase
0041693 538 2005-09-08 d1o5ka_ Class I aldolase
0046606 812 2008-09-10 d1epxa_ Class I aldolase
0048586 407 2008-09-10 d1ojxa_ Class I aldolase
0049661 253 2008-09-10 d1to3a_ Class I aldolase
0050359 2230 2008-09-10 d1w3ia_ Class I aldolase
0039482 571 2005-09-08 d1jcla_ Class I aldolase
0046741 814 2008-09-10 d1fbaa_ Class I aldolase
0048312 2340 2008-09-10 d1nal1_ Class I aldolase
0050246 555 2008-09-10 d1vlwa_ Class I aldolase
0051144 2354 2008-09-10 d1xxxa1 Class I aldolase
0045714 811 2008-09-10 d1a5ca_ Class I aldolase
0046665 1293 2008-09-10 d1f05a_ Class I aldolase
0047939 1271 2008-09-10 d1l6wa_ Class I aldolase
0048940 333 2008-09-10 d1qfea_ Class I aldolase
0050143 745 2008-09-10 d1vcva1 Class I aldolase
0050945 811 2008-09-10 d1xfba1 Class I aldolase
0041658 556 2005-09-08 d1o0ya_ Class I aldolase
0051699 746 2008-09-10 d2a4aa1 Class I aldolase
0046720 1642 2008-09-10 d1f74a_ Class I aldolase
0048294 623 2008-09-10 d1n7ka_ Class I aldolase
0046628 883 2008-09-10 d1euaa_ Class I aldolase
0048611 1297 2008-09-10 d1onra_ Class I aldolase
0049848 2582 2008-09-10 d1ub3a_ Class I aldolase
0050734 1285 2008-09-10 d1wx0a1 Class I aldolase
0052334 1294 2008-09-10 d2cwna1 Class I aldolase
0047070 651 2008-09-10 d1gvfa_ Class II FBP aldolase
0036525 257 2005-09-08 d1dosa_ Class II FBP aldolase
0049247 505 2008-09-10 d1rv8a_ Class II FBP aldolase
0051345 991 2008-09-10 d1ylva_ 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
0035351 286 2005-09-08 d1b4ka_ 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
0046461 993 2008-09-10 d1e51a_ 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
0050339 994 2008-09-10 d1w1za_ 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
0045877 994 2008-09-10 d1b4ea_ 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
0046878 1591 2008-09-10 d1fxqa_ Class I DAHP synthetase
0046288 1530 2008-09-10 d1d9ea_ Class I DAHP synthetase
0049279 1424 2008-09-10 d1rzma_ Class I DAHP synthetase
0046975 1152 2008-09-10 d1gg1a_ Class I DAHP synthetase
0048496 986 2008-09-10 d1o60a_ Class I DAHP synthetase
0047183 1331 2008-09-10 d1hfba_ Class I DAHP synthetase
0048453 3222 2008-09-10 d1nvma2 HMGL-like
0049453 2175 2008-09-10 d1sr9a2 HMGL-like
0043346 669 2005-09-08 d1rqba2 HMGL-like
0050239 1609 2008-09-10 d1vlia2 NeuB-like
0051114 748 2008-09-10 d1xuua2 NeuB-like
0052702 192 2008-09-10 d2fiqa1 GatZ-like
0051933 395 2008-09-10 d2b7oa1 Class-II DAHP synthetase