SUPERFAMILY 1.75 HMM library and genome assignments server

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Dihydropteroate synthetase-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 6 SUPERFAMILY models representing the Dihydropteroate synthetase-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0046651 1397 2008-09-10 d1eyea_ Dihydropteroate synthetase
0045781 1378 2008-09-10 d1aj2a_ Dihydropteroate synthetase
0045762 1594 2008-09-10 d1ad1a_ Dihydropteroate synthetase
0049727 1925 2008-09-10 d1tx2a_ Dihydropteroate synthetase
0048901 1403 2008-09-10 d1q7za1 Methyltetrahydrofolate-utiluzing methyltransferases
0046719 900 2008-09-10 d1f6ya_ Methyltetrahydrofolate-utiluzing methyltransferases