SUPERFAMILY 1.75 HMM library and genome assignments server

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Adenine nucleotide alpha hydrolases-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 32 SUPERFAMILY models representing the Adenine nucleotide alpha hydrolases-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0039538 425 2005-09-08 d1jgta1 N-type ATP pyrophosphatases
0047035 4009 2008-09-10 d1gpma1 N-type ATP pyrophosphatases
0046213 3932 2008-09-10 d1ct9a1 N-type ATP pyrophosphatases
0050739 1382 2008-09-10 d1wxia1 N-type ATP pyrophosphatases
0054501 1989 2010-05-31 d2pg3a1 N-type ATP pyrophosphatases
0047848 2424 2008-09-10 d1kora1 N-type ATP pyrophosphatases
0052363 373 2008-09-10 d2d13a1 N-type ATP pyrophosphatases
0048858 1218 2008-09-10 d1q15a1 N-type ATP pyrophosphatases
0051038 4499 2008-09-10 d1xnga1 N-type ATP pyrophosphatases
0045391 525 2005-09-08 d2nsya_ N-type ATP pyrophosphatases
0039977 531 2005-09-08 d1k92a1 N-type ATP pyrophosphatases
0043381 148 2005-09-08 d1ru8a_ N-type ATP pyrophosphatases
0050233 2573 2008-09-10 d1vl2a1 N-type ATP pyrophosphatases
0049476 3100 2008-09-10 d1sura_ PAPS reductase-like
0051645 1449 2008-09-10 d1zuna1 PAPS reductase-like
0048520 1198 2008-09-10 d1o97c_ ETFP subunits
0036970 656 2005-09-08 d1efva1 ETFP subunits
0046546 1121 2008-09-10 d1efvb_ ETFP subunits
0036966 210 2005-09-08 d1efpb_ ETFP subunits
0046540 894 2008-09-10 d1efpa1 ETFP subunits
0048521 1004 2008-09-10 d1o97d1 ETFP subunits
0042641 2 2005-09-08 d1q77a_ Universal stress protein-like
0050614 1104 2008-09-10 d1wjga_ Universal stress protein-like
0054132 25 2010-05-31 d2iela1 Universal stress protein-like
0047632 984 2008-09-10 d1jmva_ Universal stress protein-like
0049673 4022 2008-09-10 d1tq8a_ Universal stress protein-like
0048172 4249 2008-09-10 d1mjha_ Universal stress protein-like
0052923 3254 2008-09-10 d2gm3a1 Universal stress protein-like
0048369 1409 2008-09-10 d1ni5a1 PP-loop ATPase
0050746 1633 2008-09-10 d1wy5a1 PP-loop ATPase
0050128 132 2008-09-10 d1vbka1 ThiI-like
0052117 2812 2008-09-10 d2c5sa1 ThiI-like