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Actin-like ATPase domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 99 SUPERFAMILY models representing the Actin-like ATPase domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036764 485 2005-09-08 d1e4ft1 Actin/HSP70
0039478 1081 2005-09-08 d1jcfa1 Actin/HSP70
0046347 6311 2008-09-10 d1dkgd1 Actin/HSP70
0045070 613 2005-09-08 d1yaga1 Actin/HSP70
0047559 6909 2008-09-10 d1jcfa2 Actin/HSP70
0037166 610 2005-09-08 d1esva1 Actin/HSP70
0039963 786 2005-09-08 d1k8ka2 Actin/HSP70
0046015 6072 2008-09-10 d1bupa1 Actin/HSP70
0047192 6111 2008-09-10 d1hjoa1 Actin/HSP70
0048238 2940 2008-09-10 d1mwma2 Actin/HSP70
0046054 4544 2008-09-10 d1c0ga2 Actin/HSP70
0051254 4537 2008-09-10 d1yaga2 Actin/HSP70
0036765 737 2005-09-08 d1e4ft2 Actin/HSP70
0039962 619 2005-09-08 d1k8ka1 Actin/HSP70
0046348 2181 2008-09-10 d1dkgd2 Actin/HSP70
0035722 1359 2005-09-08 d1bupa2 Actin/HSP70
0038604 1356 2005-09-08 d1hjoa2 Actin/HSP70
0045198 760 2005-09-08 d2btfa2 Actin/HSP70
0048237 39 2008-09-10 d1mwma1 Actin/HSP70
0037167 742 2005-09-08 d1esva2 Actin/HSP70
0039964 632 2005-09-08 d1k8kb1 Actin/HSP70
0046053 3787 2008-09-10 d1c0ga1 Actin/HSP70
0050788 1196 2008-09-10 d1x3ma1 Acetokinase-like
0038007 245 2005-09-08 d1g99a2 Acetokinase-like
0049352 161 2008-09-10 d1saza1 Acetokinase-like
0038006 242 2005-09-08 d1g99a1 Acetokinase-like
0050789 1034 2008-09-10 d1x3ma2 Acetokinase-like
0049353 1522 2008-09-10 d1saza2 Acetokinase-like
0045955 270 2008-09-10 d1bg3a1 Hexokinase
0046238 263 2008-09-10 d1czan2 Hexokinase
0050050 263 2008-09-10 d1v4sa2 Hexokinase
0035529 187 2005-09-08 d1bg3a2 Hexokinase
0036203 615 2005-09-08 d1czan1 Hexokinase
0039007 201 2005-09-08 d1ig8a2 Hexokinase
0045934 267 2008-09-10 d1bdga1 Hexokinase
0046240 263 2008-09-10 d1czan4 Hexokinase
0035531 186 2005-09-08 d1bg3a4 Hexokinase
0047359 770 2008-09-10 d1ig8a1 Hexokinase
0050049 305 2008-09-10 d1v4sa1 Hexokinase
0035476 185 2005-09-08 d1bdga2 Hexokinase
0046239 273 2008-09-10 d1czan3 Hexokinase
0035530 196 2005-09-08 d1bg3a3 Hexokinase
0035709 645 2005-09-08 d1bu6o2 Glycerol kinase
0049109 3000 2008-09-10 d1r59o2 Glycerol kinase
0046011 1505 2008-09-10 d1bu6o1 Glycerol kinase
0049108 1538 2008-09-10 d1r59o1 Glycerol kinase
0052166 582 2008-09-10 d2ch5a2 BadF/BadG/BcrA/BcrD-like
0051661 43 2008-09-10 d1zxoa1 BadF/BadG/BcrA/BcrD-like
0051545 43 2008-09-10 d1zbsa2 BadF/BadG/BcrA/BcrD-like
0052165 538 2008-09-10 d2ch5a1 BadF/BadG/BcrA/BcrD-like
0051549 208 2008-09-10 d1zc6a2 BadF/BadG/BcrA/BcrD-like
0051544 213 2008-09-10 d1zbsa1 BadF/BadG/BcrA/BcrD-like
0051662 256 2008-09-10 d1zxoa2 BadF/BadG/BcrA/BcrD-like
0047243 6784 2008-09-10 d1huxa_ BadF/BadG/BcrA/BcrD-like
0051548 805 2008-09-10 d1zc6a1 BadF/BadG/BcrA/BcrD-like
0048322 170 2008-09-10 d1nbwa2 ATPase domain of dehydratase reactivase alpha subunit
0052360 914 2008-09-10 d2d0oa3 ATPase domain of dehydratase reactivase alpha subunit
0048323 986 2008-09-10 d1nbwa3 ATPase domain of dehydratase reactivase alpha subunit
0052359 246 2008-09-10 d2d0oa2 ATPase domain of dehydratase reactivase alpha subunit
0049498 2121 2008-09-10 d1sz2a1 Glucokinase
0049551 748 2008-09-10 d1t6ca1 Ppx/GppA phosphatase
0049807 1047 2008-09-10 d1u6za2 Ppx/GppA phosphatase
0049552 727 2008-09-10 d1t6ca2 Ppx/GppA phosphatase
0049808 620 2008-09-10 d1u6za3 Ppx/GppA phosphatase
0051710 8 2008-09-10 d2a6aa2 YeaZ-like
0048592 2062 2008-09-10 d1okja1 YeaZ-like
0051709 1855 2008-09-10 d2a6aa1 YeaZ-like
0041902 118 2005-09-08 d1okja2 YeaZ-like
0051509 1463 2008-09-10 d1z6ra3 ROK
0051456 1450 2008-09-10 d1z05a2 ROK
0050911 1667 2008-09-10 d1xc3a1 ROK
0051732 1504 2008-09-10 d2aa4a2 ROK
0052961 1223 2008-09-10 d2gupa2 ROK
0050671 1935 2008-09-10 d1woqa2 ROK
0051508 1098 2008-09-10 d1z6ra2 ROK
0051805 923 2008-09-10 d2ap1a2 ROK
0053029 1157 2008-09-10 d2hoea3 ROK
0051731 1107 2008-09-10 d2aa4a1 ROK
0052960 1923 2008-09-10 d2gupa1 ROK
0050670 2508 2008-09-10 d1woqa1 ROK
0051457 1356 2008-09-10 d1z05a3 ROK
0050912 1413 2008-09-10 d1xc3a2 ROK
0051804 2585 2008-09-10 d2ap1a1 ROK
0053028 1165 2008-09-10 d2hoea2 ROK
0051970 82 2008-09-10 d2bh1a1 Cyto-EpsL domain
0051971 280 2008-09-10 d2bh1a2 Cyto-EpsL domain
0052751 320 2008-09-10 d2fsja1 Ta0583-like
0052752 56 2008-09-10 d2fsja2 Ta0583-like
0052948 586 2008-09-10 d2gtda2 CoaX-like
0053210 26 2008-09-10 d2nrha1 CoaX-like
0052947 530 2008-09-10 d2gtda1 CoaX-like
0052627 200 2008-09-10 d2f9wa2 CoaX-like
0053211 538 2008-09-10 d2nrha2 CoaX-like
0052626 584 2008-09-10 d2f9wa1 CoaX-like
0054100 221 2010-05-31 d2i7na1 Fumble-like
0054102 345 2010-05-31 d2i7pa1 Fumble-like
0053898 774 2010-05-31 d2ewsa1 Fumble-like
0054101 337 2010-05-31 d2i7na2 Fumble-like
0054103 217 2010-05-31 d2i7pa2 Fumble-like