SUPERFAMILY 1.75 HMM library and genome assignments server

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Purine and uridine phosphorylases superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 17 SUPERFAMILY models representing the Purine and uridine phosphorylases superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0039496 267 2005-09-08 d1je0a_ Purine and uridine phosphorylases
0048112 1212 2008-09-10 d1m73e_ Purine and uridine phosphorylases
0051743 1818 2008-09-10 d2ac7a1 Purine and uridine phosphorylases
0046520 260 2008-09-10 d1ecpa_ Purine and uridine phosphorylases
0050186 613 2008-09-10 d1vhwa_ Purine and uridine phosphorylases
0041801 233 2005-09-08 d1odka_ Purine and uridine phosphorylases
0048936 1453 2008-09-10 d1qe5a_ Purine and uridine phosphorylases
0047738 1733 2008-09-10 d1k3fa_ Purine and uridine phosphorylases
0051268 2016 2008-09-10 d1ybfa_ Purine and uridine phosphorylases
0046099 1064 2008-09-10 d1cb0a_ Purine and uridine phosphorylases
0050047 1192 2008-09-10 d1v4na_ Purine and uridine phosphorylases
0039819 369 2005-09-08 d1jysa_ Purine and uridine phosphorylases
0048860 1271 2008-09-10 d1q1ga_ Purine and uridine phosphorylases
0046908 975 2008-09-10 d1g2oa_ Purine and uridine phosphorylases
0050257 1057 2008-09-10 d1vmka_ Purine and uridine phosphorylases
0045902 1250 2008-09-10 d1b8oa_ Purine and uridine phosphorylases
0049568 532 2008-09-10 d1t8sa_ Purine and uridine phosphorylases