SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

PRTase-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 39 SUPERFAMILY models representing the PRTase-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0035791 1507 2005-09-08 d1bzya_ Phosphoribosyltransferases (PRTases)
0041576 1150 2005-09-08 d1nula_ Phosphoribosyltransferases (PRTases)
0046852 1329 2008-09-10 d1fsga_ Phosphoribosyltransferases (PRTases)
0051163 3284 2008-09-10 d1y0ba1 Phosphoribosyltransferases (PRTases)
0038588 1140 2005-09-08 d1hgxa_ Phosphoribosyltransferases (PRTases)
0044334 1703 2005-09-08 d1ufra_ Phosphoribosyltransferases (PRTases)
0048493 4114 2008-09-10 d1o5oa_ Phosphoribosyltransferases (PRTases)
0050349 2004 2008-09-10 d1w30a_ Phosphoribosyltransferases (PRTases)
0036560 389 2005-09-08 d1dqna_ Phosphoribosyltransferases (PRTases)
0041991 1624 2005-09-08 d1orea_ Phosphoribosyltransferases (PRTases)
0047030 2185 2008-09-10 d1gph11 Phosphoribosyltransferases (PRTases)
0050105 3901 2008-09-10 d1v9sa1 Phosphoribosyltransferases (PRTases)
0051755 4240 2008-09-10 d2aeea1 Phosphoribosyltransferases (PRTases)
0035468 700 2005-09-08 d1bd3a_ Phosphoribosyltransferases (PRTases)
0041489 1463 2005-09-08 d1nona_ Phosphoribosyltransferases (PRTases)
0048919 2090 2008-09-10 d1qb7a_ Phosphoribosyltransferases (PRTases)
0051105 1804 2008-09-10 d1xtta1 Phosphoribosyltransferases (PRTases)
0038017 1375 2005-09-08 d1g9sa_ Phosphoribosyltransferases (PRTases)
0042536 566 2005-09-08 d1pzma_ Phosphoribosyltransferases (PRTases)
0048249 2652 2008-09-10 d1mzva_ Phosphoribosyltransferases (PRTases)
0050151 7165 2008-09-10 d1vdma1 Phosphoribosyltransferases (PRTases)
0041687 1164 2005-09-08 d1o57a2 Phosphoribosyltransferases (PRTases)
0046909 4037 2008-09-10 d1g2qa_ Phosphoribosyltransferases (PRTases)
0051301 3723 2008-09-10 d1yfza1 Phosphoribosyltransferases (PRTases)
0034851 1475 2005-09-08 d1a3ca_ Phosphoribosyltransferases (PRTases)
0040356 1209 2005-09-08 d1l1qa_ Phosphoribosyltransferases (PRTases)
0046155 1791 2008-09-10 d1cjba_ Phosphoribosyltransferases (PRTases)
0048678 3440 2008-09-10 d1p17b_ Phosphoribosyltransferases (PRTases)
0050435 1028 2008-09-10 d1wd5a_ Phosphoribosyltransferases (PRTases)
0036900 1216 2005-09-08 d1ecfa1 Phosphoribosyltransferases (PRTases)
0041997 1416 2005-09-08 d1oroa_ Phosphoribosyltransferases (PRTases)
0047309 4901 2008-09-10 d1i5ea_ Phosphoribosyltransferases (PRTases)
0050136 3624 2008-09-10 d1vcha1 Phosphoribosyltransferases (PRTases)
0049832 1289 2008-09-10 d1u9ya1 Phosphoribosylpyrophosphate synthetase-like
0046350 1331 2008-09-10 d1dkra2 Phosphoribosylpyrophosphate synthetase-like
0052114 2611 2008-09-10 d2c4ka2 Phosphoribosylpyrophosphate synthetase-like
0036475 644 2005-09-08 d1dkra1 Phosphoribosylpyrophosphate synthetase-like
0049833 1519 2008-09-10 d1u9ya2 Phosphoribosylpyrophosphate synthetase-like
0052113 2863 2008-09-10 d2c4ka1 Phosphoribosylpyrophosphate synthetase-like