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Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 22 SUPERFAMILY models representing the Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0037348 686 2005-09-08 d1f2da_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0043948 1469 2005-09-08 d1tdja1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050156 6201 2008-09-10 d1ve5a1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0041688 1511 2005-09-08 d1o58a_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050098 5578 2008-09-10 d1v8za1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0039302 1238 2005-09-08 d1j0aa_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0048837 4534 2008-09-10 d1pwha_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0051225 5945 2008-09-10 d1y7la1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0036788 955 2005-09-08 d1e5xa_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0043354 386 2005-09-08 d1rqxa_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050152 5509 2008-09-10 d1ve1a1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0040135 268 2005-09-08 d1kl7a_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050081 6728 2008-09-10 d1v7ca_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0051972 6101 2008-09-10 d2bhta1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0037494 1228 2005-09-08 d1fcja_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0048698 4514 2008-09-10 d1p5ja_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050641 5302 2008-09-10 d1wkva1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0042904 469 2005-09-08 d1qopb_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050122 803 2008-09-10 d1vb3a1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0039474 1264 2005-09-08 d1jbqa_ Tryptophan synthase beta subunit-like PLP-dependent enzymes
0050075 2630 2008-09-10 d1v71a1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
0051522 5337 2008-09-10 d1z7wa1 Tryptophan synthase beta subunit-like PLP-dependent enzymes