SUPERFAMILY 1.75 HMM library and genome assignments server

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Formate dehydrogenase/DMSO reductase, domains 1-3 superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 12 SUPERFAMILY models representing the Formate dehydrogenase/DMSO reductase, domains 1-3 superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0040209 1022 2005-09-08 d1kqfa2 Formate dehydrogenase/DMSO reductase, domains 1-3
0037183 1173 2005-09-08 d1eu1a2 Formate dehydrogenase/DMSO reductase, domains 1-3
0045382 1054 2005-09-08 d2napa2 Formate dehydrogenase/DMSO reductase, domains 1-3
0042561 944 2005-09-08 d1q16a2 Formate dehydrogenase/DMSO reductase, domains 1-3
0038360 750 2005-09-08 d1h0ha2 Formate dehydrogenase/DMSO reductase, domains 1-3
0053129 1588 2008-09-10 d2iv2x2 Formate dehydrogenase/DMSO reductase, domains 1-3
0036504 1176 2005-09-08 d1dmra2 Formate dehydrogenase/DMSO reductase, domains 1-3
0044058 1030 2005-09-08 d1tmoa2 Formate dehydrogenase/DMSO reductase, domains 1-3
0041852 1109 2005-09-08 d1ogya2 Formate dehydrogenase/DMSO reductase, domains 1-3
0037989 856 2005-09-08 d1g8ka2 Formate dehydrogenase/DMSO reductase, domains 1-3
0052772 3458 2008-09-10 d2fug32 Formate dehydrogenase/DMSO reductase, domains 1-3
0044013 662 2005-09-08 d1ti6a2 Formate dehydrogenase/DMSO reductase, domains 1-3