SUPERFAMILY 1.75 HMM library and genome assignments server

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Thiolase-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 44 SUPERFAMILY models representing the Thiolase-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036364 2470 2005-09-08 d1dd8a1 Thiolase-related
0039353 2509 2005-09-08 d1j3na1 Thiolase-related
0044094 2194 2005-09-08 d1tqya2 Thiolase-related
0035033 1153 2005-09-08 d1afwa2 Thiolase-related
0042063 1970 2005-09-08 d1ox0a2 Thiolase-related
0052891 3924 2008-09-10 d2gfva2 Thiolase-related
0036782 2338 2005-09-08 d1e5ma1 Thiolase-related
0049940 2043 2008-09-10 d1ulqa2 Thiolase-related
0044093 2631 2005-09-08 d1tqya1 Thiolase-related
0053135 7042 2008-09-10 d2ix4a2 Thiolase-related
0035032 1685 2005-09-08 d1afwa1 Thiolase-related
0042062 2686 2005-09-08 d1ox0a1 Thiolase-related
0052890 9098 2008-09-10 d2gfva1 Thiolase-related
0036365 1965 2005-09-08 d1dd8a2 Thiolase-related
0039354 2376 2005-09-08 d1j3na2 Thiolase-related
0044095 1748 2005-09-08 d1tqyb1 Thiolase-related
0048944 3128 2008-09-10 d1qfla1 Thiolase-related
0049939 3509 2008-09-10 d1ulqa1 Thiolase-related
0042745 1287 2005-09-08 d1qfla2 Thiolase-related
0044962 1373 2005-09-08 d1wdkc2 Thiolase-related
0053134 5156 2008-09-10 d2ix4a1 Thiolase-related
0036783 1970 2005-09-08 d1e5ma2 Thiolase-related
0049676 3918 2008-09-10 d1tqyb2 Thiolase-related
0050445 4103 2008-09-10 d1wdkc1 Thiolase-related
0047210 1260 2008-09-10 d1hnja2 Chalcone synthase-like
0049764 2851 2008-09-10 d1u0va1 Chalcone synthase-like
0036931 448 2005-09-08 d1ee0a2 Chalcone synthase-like
0044257 1004 2005-09-08 d1ub7a2 Chalcone synthase-like
0049718 530 2008-09-10 d1tvza2 Chalcone synthase-like
0041153 1780 2005-09-08 d1mzja1 Chalcone synthase-like
0044181 811 2005-09-08 d1u0ma1 Chalcone synthase-like
0049604 6700 2008-09-10 d1teda_ Chalcone synthase-like
0035564 475 2005-09-08 d1bi5a2 Chalcone synthase-like
0038813 1133 2005-09-08 d1hzpa2 Chalcone synthase-like
0047209 1716 2008-09-10 d1hnja1 Chalcone synthase-like
0049763 2606 2008-09-10 d1u0ua2 Chalcone synthase-like
0036930 507 2005-09-08 d1ee0a1 Chalcone synthase-like
0044256 588 2005-09-08 d1ub7a1 Chalcone synthase-like
0049717 2868 2008-09-10 d1tvza1 Chalcone synthase-like
0035563 528 2005-09-08 d1bi5a1 Chalcone synthase-like
0038812 2090 2005-09-08 d1hzpa1 Chalcone synthase-like
0049762 1292 2008-09-10 d1u0ua1 Chalcone synthase-like
0041154 907 2005-09-08 d1mzja2 Chalcone synthase-like
0044182 601 2005-09-08 d1u0ma2 Chalcone synthase-like