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Interleukin 8-like chemokines superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 31 SUPERFAMILY models representing the Interleukin 8-like chemokines superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0035320 305 2005-09-08 d1b2ta_ Interleukin 8-like chemokines
0037165 342 2005-09-08 d1esra_ Interleukin 8-like chemokines
0040916 326 2005-09-08 d1mgsa_ Interleukin 8-like chemokines
0043273 261 2005-09-08 d1rjta_ Interleukin 8-like chemokines
0036523 304 2005-09-08 d1doka_ Interleukin 8-like chemokines
0038729 353 2005-09-08 d1huma_ Interleukin 8-like chemokines
0042369 302 2005-09-08 d1plfa_ Interleukin 8-like chemokines
0053587 583 2010-05-31 d1icwa_ Interleukin 8-like chemokines
0035356 356 2005-09-08 d1b50a_ Interleukin 8-like chemokines
0037908 371 2005-09-08 d1g2ta_ Interleukin 8-like chemokines
0041524 338 2005-09-08 d1nr4a_ Interleukin 8-like chemokines
0045309 354 2005-09-08 d2hcca_ Interleukin 8-like chemokines
0034819 332 2005-09-08 d1a15a_ Interleukin 8-like chemokines
0037065 290 2005-09-08 d1el0a_ Interleukin 8-like chemokines
0040844 343 2005-09-08 d1m8aa_ Interleukin 8-like chemokines
0042883 318 2005-09-08 d1qnka_ Interleukin 8-like chemokines
0036062 350 2005-09-08 d1cm9a_ Interleukin 8-like chemokines
0038505 333 2005-09-08 d1ha6a_ Interleukin 8-like chemokines
0042289 297 2005-09-08 d1pfna_ Interleukin 8-like chemokines
0052499 934 2008-09-10 d2eota_ Interleukin 8-like chemokines
0035332 366 2005-09-08 d1b3aa_ Interleukin 8-like chemokines
0037458 288 2005-09-08 d1f9ra_ Interleukin 8-like chemokines
0040943 346 2005-09-08 d1mi2a_ Interleukin 8-like chemokines
0043321 335 2005-09-08 d1roda_ Interleukin 8-like chemokines
0037022 355 2005-09-08 d1eiha_ Interleukin 8-like chemokines
0039434 341 2005-09-08 d1j9oa_ Interleukin 8-like chemokines
0042732 367 2005-09-08 d1qe6b_ Interleukin 8-like chemokines
0035635 347 2005-09-08 d1bo0a_ Interleukin 8-like chemokines
0038002 331 2005-09-08 d1g91a_ Interleukin 8-like chemokines
0041737 293 2005-09-08 d1o80a_ Interleukin 8-like chemokines
0046734 901 2008-09-10 d1f9pa_ Interleukin 8-like chemokines