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CBS-domain pair superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 27 SUPERFAMILY models representing the CBS-domain pair superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0053593 5713 2010-05-31 d1o50a3 CBS-domain pair
0053883 8755 2010-05-31 d2ef7a1 CBS-domain pair
0054706 6023 2010-05-31 d2v8qe1 CBS-domain pair
0053224 5684 2008-09-10 d2nyca1 CBS-domain pair
0053653 1690 2010-05-31 d1yava3 CBS-domain pair
0054421 6018 2010-05-31 d2ouxa2 CBS-domain pair
0054752 8100 2010-05-31 d2yzqa2 CBS-domain pair
0053601 7580 2010-05-31 d1pvma4 CBS-domain pair
0054316 6569 2010-05-31 d2o16a3 CBS-domain pair
0054747 8328 2010-05-31 d2yvxa2 CBS-domain pair
0053589 5142 2010-05-31 d1jr1a4 CBS-domain pair
0053801 1578 2010-05-31 d2d4za3 CBS-domain pair
0054677 6077 2010-05-31 d2riha1 CBS-domain pair
0054930 5024 2010-05-31 d3ddja2 CBS-domain pair
0053648 7067 2010-05-31 d1y5ha3 CBS-domain pair
0054402 5387 2010-05-31 d2ooxe2 CBS-domain pair
0054751 6298 2010-05-31 d2yzqa1 CBS-domain pair
0053599 6969 2010-05-31 d1pbja3 CBS-domain pair
0054203 4790 2010-05-31 d2j9la1 CBS-domain pair
0054707 2931 2010-05-31 d2v8qe2 CBS-domain pair
0053588 5560 2010-05-31 d1jcna4 CBS-domain pair
0053668 7305 2010-05-31 d1zfja4 CBS-domain pair
0054665 7149 2010-05-31 d2rc3a1 CBS-domain pair
0054929 7003 2010-05-31 d3ddja1 CBS-domain pair
0053619 5961 2010-05-31 d1vr9a3 CBS-domain pair
0054401 1253 2010-05-31 d2ooxe1 CBS-domain pair
0054750 8241 2010-05-31 d2yzia1 CBS-domain pair