SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Ribonuclease PH domain 2-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 15 SUPERFAMILY models representing the Ribonuclease PH domain 2-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036741 381 2005-09-08 d1e3ha5 Ribonuclease PH domain 2-like
0054210 870 2010-05-31 d2je6a2 Ribonuclease PH domain 2-like
0053738 2166 2010-05-31 d2ba0d2 Ribonuclease PH domain 2-like
0054273 236 2010-05-31 d2nn6e2 Ribonuclease PH domain 2-like
0043149 401 2005-09-08 d1r6la2 Ribonuclease PH domain 2-like
0054267 543 2010-05-31 d2nn6b2 Ribonuclease PH domain 2-like
0053756 1631 2010-05-31 d2br2b2 Ribonuclease PH domain 2-like
0046448 1987 2008-09-10 d1e3ha6 Ribonuclease PH domain 2-like
0054271 398 2010-05-31 d2nn6d2 Ribonuclease PH domain 2-like
0042084 422 2005-09-08 d1oysa2 Ribonuclease PH domain 2-like
0054265 325 2010-05-31 d2nn6a2 Ribonuclease PH domain 2-like
0053740 532 2010-05-31 d2ba0g2 Ribonuclease PH domain 2-like
0054275 181 2010-05-31 d2nn6f2 Ribonuclease PH domain 2-like
0044292 543 2005-09-08 d1udsa2 Ribonuclease PH domain 2-like
0054269 442 2010-05-31 d2nn6c2 Ribonuclease PH domain 2-like