SUPERFAMILY 1.75 HMM library and genome assignments server

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Cytochrome b5-like heme/steroid binding domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 10 SUPERFAMILY models representing the Cytochrome b5-like heme/steroid binding domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036519 619 2005-09-08 d1do9a_ Cytochrome b5
0035243 640 2005-09-08 d1awpa_ Cytochrome b5
0043686 543 2005-09-08 d1soxa2 Cytochrome b5
0038968 664 2005-09-08 d1icca_ Cytochrome b5
0036191 681 2005-09-08 d1cxya_ Cytochrome b5
0040960 593 2005-09-08 d1mj4a_ Cytochrome b5
0038614 612 2005-09-08 d1hkoa_ Cytochrome b5
0035258 625 2005-09-08 d1axxa_ Cytochrome b5
0040012 654 2005-09-08 d1kbia2 Cytochrome b5
0043820 384 2005-09-08 d1t0ga_ Steroid-binding domain