SUPERFAMILY 1.75 HMM library and genome assignments server

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Glutathione synthetase ATP-binding domain-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 27 SUPERFAMILY models representing the Glutathione synthetase ATP-binding domain-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0037006 1226 2005-09-08 d1ehia2 ATP-binding domain of peptide synthetases
0046457 6894 2008-09-10 d1e4ea2 ATP-binding domain of peptide synthetases
0047408 7470 2008-09-10 d1iowa2 ATP-binding domain of peptide synthetases
0038243 341 2005-09-08 d1gsaa2 ATP-binding domain of peptide synthetases
0044434 2548 2005-09-08 d1ulza3 BC ATP-binding domain-like
0038251 1670 2005-09-08 d1gsoa3 BC ATP-binding domain-like
0050408 529 2008-09-10 d1w96a3 BC ATP-binding domain-like
0036618 2252 2005-09-08 d1dv1a3 BC ATP-binding domain-like
0034972 938 2005-09-08 d1a9xa6 BC ATP-binding domain-like
0046656 7861 2008-09-10 d1eyza3 BC ATP-binding domain-like
0045751 1031 2008-09-10 d1a9xa5 BC ATP-binding domain-like
0035376 479 2005-09-08 d1b6ra3 BC ATP-binding domain-like
0044852 1221 2005-09-08 d1vkza3 BC ATP-binding domain-like
0035215 284 2005-09-08 d1auva2 Synapsin C-terminal domain
0047322 8077 2008-09-10 d1i7na2 Synapsin C-terminal domain
0045447 823 2005-09-08 d2scub2 Succinyl-CoA synthetase, beta-chain, N-terminal domain
0046632 1584 2008-09-10 d1eucb2 Succinyl-CoA synthetase, beta-chain, N-terminal domain
0047779 1132 2008-09-10 d1kbla3 Pyruvate phosphate dikinase, N-terminal domain
0047135 1103 2008-09-10 d1h6za3 Pyruvate phosphate dikinase, N-terminal domain
0050127 1123 2008-09-10 d1vbga3 Pyruvate phosphate dikinase, N-terminal domain
0045315 63 2005-09-08 d2hgsa4 Eukaryotic glutathione synthetase ATP-binding domain
0040724 69 2005-09-08 d1m0wa2 Eukaryotic glutathione synthetase ATP-binding domain
0044272 1763 2005-09-08 d1uc8a2 Lysine biosynthesis enzyme LysX ATP-binding domain
0053122 246 2008-09-10 d2io8a3 Glutathionylspermidine synthase ATP-binding domain-like
0054653 378 2010-05-31 d2r7ka2 PurP ATP-binding domain-like
0054495 83 2010-05-31 d2pbza2 PurP ATP-binding domain-like
0054655 1254 2010-05-31 d2r85a2 PurP ATP-binding domain-like