SUPERFAMILY 1.75 HMM library and genome assignments server

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BPTI-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 26 SUPERFAMILY models representing the BPTI-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0035017 875 2005-09-08 d1adza_ Small Kunitz-type inhibitors & BPTI-like toxins
0036599 885 2005-09-08 d1dtxa_ Small Kunitz-type inhibitors & BPTI-like toxins
0035719 881 2005-09-08 d1bunb_ Small Kunitz-type inhibitors & BPTI-like toxins
0040457 882 2005-09-08 d1ld6a_ Small Kunitz-type inhibitors & BPTI-like toxins
0047876 1965 2008-09-10 d1ktha_ Small Kunitz-type inhibitors & BPTI-like toxins
0035576 866 2005-09-08 d1bika1 Small Kunitz-type inhibitors & BPTI-like toxins
0037468 874 2005-09-08 d1faki_ Small Kunitz-type inhibitors & BPTI-like toxins
0044524 875 2005-09-08 d1uuba_ Small Kunitz-type inhibitors & BPTI-like toxins
0034981 871 2005-09-08 d1aapa_ Small Kunitz-type inhibitors & BPTI-like toxins
0036593 879 2005-09-08 d1dtka_ Small Kunitz-type inhibitors & BPTI-like toxins
0043615 871 2005-09-08 d1shpa_ Small Kunitz-type inhibitors & BPTI-like toxins
0053674 2055 2010-05-31 d1zr0b1 Small Kunitz-type inhibitors & BPTI-like toxins
0035678 847 2005-09-08 d1brbi_ Small Kunitz-type inhibitors & BPTI-like toxins
0039476 885 2005-09-08 d1jc6a_ Small Kunitz-type inhibitors & BPTI-like toxins
0046316 1972 2008-09-10 d1dema_ Small Kunitz-type inhibitors & BPTI-like toxins
0035506 882 2005-09-08 d1bf0a_ Small Kunitz-type inhibitors & BPTI-like toxins
0037040 886 2005-09-08 d1ejmb_ Small Kunitz-type inhibitors & BPTI-like toxins
0042851 883 2005-09-08 d1qlqa_ Small Kunitz-type inhibitors & BPTI-like toxins
0053656 1939 2010-05-31 d1yldb1 Small Kunitz-type inhibitors & BPTI-like toxins
0035577 867 2005-09-08 d1bika2 Small Kunitz-type inhibitors & BPTI-like toxins
0039152 886 2005-09-08 d1irha_ Small Kunitz-type inhibitors & BPTI-like toxins
0045626 887 2005-09-08 d5ptia_ Small Kunitz-type inhibitors & BPTI-like toxins
0044071 3 2005-09-08 d1tocr1 Soft tick anticoagulant proteins
0044072 859 2005-09-08 d1tocr2 Soft tick anticoagulant proteins
0036218 3 2005-09-08 d1d0da_ Soft tick anticoagulant proteins
0054682 743 2010-05-31 d2uuyb1 Tick tryptase inhibitor-like