SUPERFAMILY 1.75 HMM library and genome assignments server

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Inhibitor of apoptosis (IAP) repeat superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 10 SUPERFAMILY models representing the Inhibitor of apoptosis (IAP) repeat superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0039490 325 2005-09-08 d1jd5a_ Inhibitor of apoptosis (IAP) repeat
0035887 322 2005-09-08 d1c9qa_ Inhibitor of apoptosis (IAP) repeat
0050901 965 2008-09-10 d1xb0b_ Inhibitor of apoptosis (IAP) repeat
0042068 324 2005-09-08 d1oxna_ Inhibitor of apoptosis (IAP) repeat
0037913 321 2005-09-08 d1g3fa_ Inhibitor of apoptosis (IAP) repeat
0043565 330 2005-09-08 d1se0a_ Inhibitor of apoptosis (IAP) repeat
0040778 316 2005-09-08 d1m4ma_ Inhibitor of apoptosis (IAP) repeat
0036727 298 2005-09-08 d1e31a_ Inhibitor of apoptosis (IAP) repeat
0053073 962 2008-09-10 d2i3ha1 Inhibitor of apoptosis (IAP) repeat
0042700 326 2005-09-08 d1qbha_ Inhibitor of apoptosis (IAP) repeat