SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): phyllome trichome

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + 2:   epidermis [PO:0005679] <12>(334|497) (335|211|73)
+ + 2:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ 1:   trichome [PO:0000282] <7>(7|9) (8|4|0)
0:   phyllome trichome [PO:0025186] <7>(4|4) (4|2|0)
- 1:   leaf trichome [PO:0006504] <2>(4|4) (4|2|0)
- 1:   bract trichome [PO:0025098](0|0) (0|0|0)
- 1:   carpel trichome [PO:0025208](0|0) (0|0|0)
- 1:   petal trichome [PO:0025187](0|0) (0|0|0)
- 1:   sepal trichome [PO:0025182](0|0) (0|0|0)
- 1:   stamen trichome [PO:0025209](0|0) (0|0|0)
- 1:   tepal trichome [PO:0025188](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cupredoxins8.24e-16Direct
Thiolase-like0.00004308Direct
RING/U-box0.0009414Direct
Nucleotide-diphospho-sugar transferases0.2319Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Multidomain cupredoxins0Direct
Chalcone synthase-like0.00001237Direct
RING finger domain, C3HC40.00002091Direct
Myb/SANT domain0.05014Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cupredoxins6.361e-16Direct
Thiolase-like0.00003368Direct
RING/U-box0.0007455Direct
Nucleotide-diphospho-sugar transferases0.2105Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49503,49503
  • 49503 - Cupredoxins
  • 49503 - Cupredoxins
  • 0Direct
    53901,53901
  • 53901 - Thiolase-like
  • 53901 - Thiolase-like
  • 0.00002337Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)