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Plant ANatomical entity (PAN): root tip

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + 3:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + 3:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + 2:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + 2:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ + 2:   root system [PO:0025025] <3>(172|277) (175|127|50)
+ + 2:   cardinal part of multi-tissue plant structure [PO:0025498] <8>(185|291) (186|132|50)
+ 1:   cardinal organ part [PO:0025001] <61>(182|290) (183|132|50)
+ 1:   root [PO:0009005] <20>(163|271) (163|125|50)
0:   root tip [PO:0000025] <5>(17|15) (17|4|0)
- 1:   root cap [PO:0020123] <4>(2|2) (2|0|0)
- 1:   lateral root tip [PO:0000027] <3>(2|2) (2|0|0)
- 1:   primary root tip [PO:0000026] <3>(2|2) (2|0|0)
- 1:   root elongation zone [PO:0025181] <2>(1|1) (1|0|0)
- 1:   root meristematic apical cell [PO:0030008](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000003833Direct
NAC domain0.0000004618Direct
Band 7/SPFH domain0.000001205Direct
Cullin repeat-like0.000002419Direct
Ammonium transporter0.000007032Direct
UDP-Glycosyltransferase/glycogen phosphorylase0.00001515Direct
Profilin (actin-binding protein)0.00001949Direct
Bet v1-like0.00002424Direct
Magnesium transport protein CorA, transmembrane region0.00008673Direct
PHL pollen allergen0.0000969Direct
Barwin-like endoglucanases0.0001546Direct
CheY-like0.0003507Direct
beta-beta-alpha zinc fingers0.0003773Direct
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin0.004549Inherited
Histone-fold0.01302Inherited
SRF-like0.02105Inherited
Leucine zipper domain0.02467Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Trehalose-6-phosphate synthase, OtsA0.000000000000651Direct
Homeodomain0.00000000172Direct
NAC domain0.0000005919Direct
Ammonium transporter0.000006507Direct
Profilin (actin-binding protein)0.00001733Direct
Magnesium transport protein CorA, transmembrane region0.00003952Direct
Exocyst complex component0.00004155Direct
Pollen allergen PHL P 1 N-terminal domain0.0000716Direct
PHL pollen allergen0.00009205Direct
CheY-related0.0001076Direct
Trehalose-phosphatase0.0003404Direct
Plant lipid-transfer and hydrophobic proteins0.0006523Direct
Nucleosome core histones0.0006523Direct
SRF-like0.02134Inherited
Leucine zipper domain0.02343Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000002965Direct
NAC domain0.0000003584Direct
Band 7/SPFH domain0.0000009361Direct
Cullin repeat-like0.000001881Direct
Ammonium transporter0.000005476Direct
UDP-Glycosyltransferase/glycogen phosphorylase0.00001181Direct
Profilin (actin-binding protein)0.00001521Direct
Bet v1-like0.00001893Direct
Magnesium transport protein CorA, transmembrane region0.00006792Direct
PHL pollen allergen0.00007591Direct
Barwin-like endoglucanases0.0001213Direct
CheY-like0.0002762Direct
beta-beta-alpha zinc fingers0.0002973Direct
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin0.003647Inherited
Histone-fold0.0106Inherited
SRF-like0.01729Inherited
Leucine zipper domain0.02035Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53756,56784
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 56784 - HAD-like
  • 0.00000000001724Direct
    52172,46689
  • 52172 - CheY-like
  • 46689 - Homeodomain-like
  • 0.000001381Direct
    55961,55961
  • 55961 - Bet v1-like
  • 55961 - Bet v1-like
  • 0.000003013Direct
    50685,49590
  • 50685 - Barwin-like endoglucanases
  • 49590 - PHL pollen allergen
  • 0.00007591Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)