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Plant ANatomical entity (PAN): plant sperm cell

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + 2:   plant cell [PO:0009002] <33>(418|600) (419|264|86)
+ 1:   gamete [PO:0025006] <2>(20|37) (21|11|5)
0:   plant sperm cell [PO:0000084] <2>(16|32) (16|11|5)
- 1:   antheridium sperm cell [PO:0025120](0|0) (0|0|0)
- 1:   pollen sperm cell [PO:0025121](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
S-adenosylmethionine synthetase0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Lesion bypass DNA polymerase (Y-family), little finger domain0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
AlbA-like0Direct
Ribosomal protein L39e0Direct
Translation initiation factor 2 beta, aIF2beta, N-terminal domain0Direct
E2F-DP heterodimerization region0Direct
eIF1-like0Direct
Zinc-binding domain of translation initiation factor 2 beta0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
Tautomerase/MIF0Direct
Ribosomal protein L19 (L19e)0Direct
WD40 repeat-like0.0000006044Direct
NHL repeat0.0009188Direct
Acyl-CoA binding protein0.0009188Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Hypothetical protein At2g341600Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
GABARAP-like0Direct
monodomain cytochrome c0Direct
Ribosomal protein L19 (L19e)0Direct
Zinc-binding domain of translation initiation factor 2 beta0Direct
Poly(ADP-ribose) polymerase, C-terminal domain0Direct
E2F dimerization segment0Direct
Ribosomal protein L39e0Direct
Ribosomal protein L10e0Direct
Translation initiation factor 2 beta, aIF2beta, N-terminal domain0Direct
MIF-related0Direct
Cell cycle arrest protein BUB30Direct
Lesion bypass DNA polymerase (Y-family), catalytic domain0Direct
eIF1-like0Direct
ATP-dependent DNA ligase catalytic domain0Direct
Transcriptional coactivator PC4 C-terminal domain0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
EDF1-like0Direct
Molybdenum-containing oxidoreductases-like dimerisation domain0Direct
DNase I-like0Direct
Chromo barrel domain0Direct
RWD domain0Direct
S-adenosylmethionine synthetase0Direct
5' nucleotidase-like0Direct
Oxidoreductase molybdopterin-binding domain0Direct
FHA domain0.00003632Direct
WD40-repeat0.00005118Direct
DNA ligase/mRNA capping enzyme postcatalytic domain0.0001735Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0.0003582Direct
CAF1-like ribonuclease0.0003606Direct
Acyl-CoA binding protein0.0006862Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Translation initiation factor 2 beta, aIF2beta, N-terminal domain0Direct
eIF1-like0Direct
Ribosomal protein L39e0Direct
Lesion bypass DNA polymerase (Y-family), little finger domain0Direct
Ribosomal protein L19 (L19e)0Direct
AlbA-like0Direct
E2F-DP heterodimerization region0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
S-adenosylmethionine synthetase0Direct
Tautomerase/MIF0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Zinc-binding domain of translation initiation factor 2 beta0Direct
WD40 repeat-like0.0000004692Direct
NHL repeat0.0007274Direct
Acyl-CoA binding protein0.0007274Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    57850,54928
  • 57850 - RING/U-box
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    56672,100879
  • 56672 - DNA/RNA polymerases
  • 100879 - Lesion bypass DNA polymerase (Y-family), little finger domain
  • 0Direct
    117018,56091
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 0Direct
    56524,81296
  • 56524 - Oxidoreductase molybdopterin-binding domain
  • 81296 - E set domains
  • 0Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    100966,75689
  • 100966 - Translation initiation factor 2 beta, aIF2beta, N-terminal domain
  • 75689 - Zinc-binding domain of translation initiation factor 2 beta
  • 0Direct
    57850,52540
  • 57850 - RING/U-box
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00004723Direct
    56091,50249
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 0.0001856Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0.0007274Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    117018,56091,50249
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
  • 0Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0007274Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)