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Plant ANatomical entity (PAN): shoot axis cortex

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   collective plant structure [PO:0025497] <2>(568|768) (570|338|104)
+ + + + 4:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   collective plant organ structure [PO:0025007] <7>(531|726) (533|315|98)
+ + + 3:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + 2:   shoot system [PO:0009006] <18>(516|705) (517|311|98)
+ + 2:   portion of plant tissue [PO:0009007] <57>(381|548) (383|235|78)
+ + 2:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ 1:   shoot axis [PO:0025029] <25>(198|318) (199|150|55)
+ 1:   cortex [PO:0005708] <9>(7|5) (7|1|0)
+ 1:   portion of ground tissue [PO:0025059] <28>(19|21) (19|7|2)
0:   shoot axis cortex [PO:0000223] <2>(4|2) (4|1|0)
- 1:   shoot axis endodermis [PO:0005058](0|0) (0|0|0)
- 1:   shoot axis hypodermis [PO:0005057](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RuBisCO, small subunit0Direct
Chlorophyll a-b binding protein0Direct
Skp1 dimerisation domain-like0.00000006273Direct
POZ domain0.00002643Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
RuBisCO, small subunit0Direct
Chlorophyll a-b binding protein0Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Chlorophyll a-b binding protein0Direct
RuBisCO, small subunit0Direct
Skp1 dimerisation domain-like0.0000000486Direct
POZ domain0.00002064Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0000000486Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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